RNA–Protein interactions for RNA: ENST00000296550.11

DCLK2-201, Transcript of doublecortin like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK2, Length 4,265 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK2-201ENST00000296550 LCE6AA0A183 80 aa9.81□□□□□ -0.84
DCLK2-201ENST00000296550 PKD1L1Q8TDX9 2849 aa9.81□□□□□ -0.84
DCLK2-201ENST00000296550 Q6ZRN7 208 aaPredicted RBP9.81□□□□□ -0.84
DCLK2-201ENST00000296550 LINC00483Q53H64 154 aa9.76□□□□□ -0.85
DCLK2-201ENST00000296550 PRR26Q8N8Z3 221 aa9.76□□□□□ -0.85
DCLK2-201ENST00000296550 KRTAP10-2P60368 255 aa9.76□□□□□ -0.85
DCLK2-201ENST00000296550 Q6ZR54 194 aa9.75□□□□□ -0.85
DCLK2-201ENST00000296550 CDC42SE1Q9NRR8 79 aa9.75□□□□□ -0.85
DCLK2-201ENST00000296550 LCA10Q71F78 164 aa9.75□□□□□ -0.85
DCLK2-201ENST00000296550 Q75L30 129 aa9.75□□□□□ -0.85
DCLK2-201ENST00000296550 C9orf92A6NGG3 77 aa9.74□□□□□ -0.85
DCLK2-201ENST00000296550 K7ERS5 55 aa9.74□□□□□ -0.85
DCLK2-201ENST00000296550 ANK3Q12955 4377 aaKnown RBP9.73□□□□□ -0.85
DCLK2-201ENST00000296550 KRTAP10-1P60331 282 aa9.7□□□□□ -0.86
DCLK2-201ENST00000296550 KRTAP13-1Q8IUC0 172 aa9.68□□□□□ -0.86
DCLK2-201ENST00000296550 HRES1P13985 223 aa9.66□□□□□ -0.86
DCLK2-201ENST00000296550 TRRAPQ9Y4A5 3859 aa9.65□□□□□ -0.87
DCLK2-201ENST00000296550 A6NN06 94 aa9.64□□□□□ -0.87
DCLK2-201ENST00000296550 A0A087X002 238 aa9.63□□□□□ -0.87
DCLK2-201ENST00000296550 NOTCH2NLQ7Z3S9 236 aa9.63□□□□□ -0.87
DCLK2-201ENST00000296550 SPINK7P58062 85 aa9.6□□□□□ -0.87
DCLK2-201ENST00000296550 PRAC1Q96KF2 57 aa9.59□□□□□ -0.87
DCLK2-201ENST00000296550 UQCR11O14957 56 aa9.59□□□□□ -0.87
DCLK2-201ENST00000296550 Q5W150 140 aa9.58□□□□□ -0.88
DCLK2-201ENST00000296550 Q8N1X5 172 aa9.58□□□□□ -0.88
DCLK2-201ENST00000296550 TENM2Q9NT68 2774 aa9.57□□□□□ -0.88
DCLK2-201ENST00000296550 LINC01558Q9Y6Z2 57 aa9.57□□□□□ -0.88
DCLK2-201ENST00000296550 TGP01266 2768 aa9.56□□□□□ -0.88
DCLK2-201ENST00000296550 ZNF469Q96JG9 3925 aaPredicted RBP9.56□□□□□ -0.88
DCLK2-201ENST00000296550 MIR22HGQ0VDD5 57 aa9.52□□□□□ -0.89
DCLK2-201ENST00000296550 H3BS24 57 aa9.49□□□□□ -0.89
DCLK2-201ENST00000296550 LINC01554Q52M75 96 aa9.44□□□□□ -0.9
DCLK2-201ENST00000296550 J3QL48 77 aa9.42□□□□□ -0.9
DCLK2-201ENST00000296550 KRTAP13-2Q52LG2 175 aa9.39□□□□□ -0.91
DCLK2-201ENST00000296550 ASB16-AS1Q495Z4 193 aa9.39□□□□□ -0.91
DCLK2-201ENST00000296550 DMAC1Q96GE9 116 aa9.39□□□□□ -0.91
DCLK2-201ENST00000296550 ADM2Q7Z4H4 148 aa9.38□□□□□ -0.91
DCLK2-201ENST00000296550 SRRM2Q9UQ35 2752 aaKnown RBP9.29□□□□□ -0.92
DCLK2-201ENST00000296550 Q5VSD8 79 aa9.27□□□□□ -0.93
DCLK2-201ENST00000296550 AKAP9Q99996 3911 aa9.26□□□□□ -0.93
DCLK2-201ENST00000296550 COX6B2Q6YFQ2 88 aa9.23□□□□□ -0.93
DCLK2-201ENST00000296550 KRTAP21-3Q3LHN1 58 aa9.22□□□□□ -0.93
DCLK2-201ENST00000296550 CSAG1Q6PB30 78 aa9.22□□□□□ -0.93
DCLK2-201ENST00000296550 Q6ZSA8 131 aa9.19□□□□□ -0.94
DCLK2-201ENST00000296550 A0A1B0GU33 70 aa9.19□□□□□ -0.94
DCLK2-201ENST00000296550 KRTAP1-4P0C5Y4 121 aa9.14□□□□□ -0.95
DCLK2-201ENST00000296550 FBN3Q75N90 2809 aa9.13□□□□□ -0.95
DCLK2-201ENST00000296550 A0A0D9SG42 100 aa9.09□□□□□ -0.95
DCLK2-201ENST00000296550 RPS29P62273 56 aaKnown RBP9.09□□□□□ -0.95
DCLK2-201ENST00000296550 SPATA8Q6RVD6 105 aa9.09□□□□□ -0.95
DCLK2-201ENST00000296550 MEGF8Q7Z7M0 2845 aa9.04□□□□□ -0.96
DCLK2-201ENST00000296550 KRTAP16-1A8MUX0 517 aa8.96□□□□□ -0.98
DCLK2-201ENST00000296550 HUWE1Q7Z6Z7 4374 aaKnown RBP8.95□□□□□ -0.98
DCLK2-201ENST00000296550 SPINT4Q6UDR6 99 aa8.94□□□□□ -0.98
DCLK2-201ENST00000296550 KRTAP13-3Q3SY46 172 aa8.93□□□□□ -0.98
DCLK2-201ENST00000296550 S4R3F8 94 aa8.92□□□□□ -0.98
DCLK2-201ENST00000296550 COL7A1Q02388 2944 aa8.92□□□□□ -0.98
DCLK2-201ENST00000296550 H1FX-AS1Q4G0G2 97 aa8.91□□□□□ -0.98
DCLK2-201ENST00000296550 A8MUU9 505 aa8.9□□□□□ -0.98
DCLK2-201ENST00000296550 C20orf166-AS1Q96NR2 134 aa8.88□□□□□ -0.99
DCLK2-201ENST00000296550 CRIPTQ9P021 101 aa8.88□□□□□ -0.99
DCLK2-201ENST00000296550 CSMD3Q7Z407 3707 aa8.85□□□□□ -0.99
DCLK2-201ENST00000296550 SEC61BP60468 96 aaKnown RBP8.82□□□□□ -1
DCLK2-201ENST00000296550 RPL37P61927 97 aaKnown RBP8.77□□□□□ -1.01
DCLK2-201ENST00000296550 KRTAP25-1Q3LHN0 102 aa8.77□□□□□ -1.01
DCLK2-201ENST00000296550 ROMO1P60602 79 aa8.76□□□□□ -1.01
DCLK2-201ENST00000296550 M0R2T5 61 aa8.75□□□□□ -1.01
DCLK2-201ENST00000296550 DNAH9Q9NYC9 4486 aa8.66□□□□□ -1.02
DCLK2-201ENST00000296550 R4GN34 69 aa8.66□□□□□ -1.02
DCLK2-201ENST00000296550 A0A1B0GVY2 172 aa8.63□□□□□ -1.03
DCLK2-201ENST00000296550 CAMK2N1Q7Z7J9 78 aa8.62□□□□□ -1.03
DCLK2-201ENST00000296550 DNAH10Q8IVF4 4471 aa8.58□□□□□ -1.04
DCLK2-201ENST00000296550 XP32Q5T750 250 aa8.57□□□□□ -1.04
DCLK2-201ENST00000296550 PLECQ15149 4684 aaKnown RBP8.56□□□□□ -1.04
DCLK2-201ENST00000296550 H0YAA0 97 aa8.56□□□□□ -1.04
DCLK2-201ENST00000296550 M0QZ58 72 aa8.55□□□□□ -1.04
DCLK2-201ENST00000296550 KRTAP10-8P60410 259 aa8.46□□□□□ -1.05
DCLK2-201ENST00000296550 DNAH1Q9P2D7 4330 aa8.44□□□□□ -1.06
DCLK2-201ENST00000296550 KRTAP3-1Q9BYR8 98 aa8.41□□□□□ -1.06
DCLK2-201ENST00000296550 NDUFAF8A1L188 74 aa8.39□□□□□ -1.07
DCLK2-201ENST00000296550 ANK2Q01484 3957 aa8.38□□□□□ -1.07
DCLK2-201ENST00000296550 P0C880 135 aa8.35□□□□□ -1.07
DCLK2-201ENST00000296550 VPS13DQ5THJ4 4388 aa8.34□□□□□ -1.07
DCLK2-201ENST00000296550 DNAH11Q96DT5 4516 aa8.34□□□□□ -1.07
DCLK2-201ENST00000296550 TPRXLQ17RH7 258 aa8.34□□□□□ -1.07
DCLK2-201ENST00000296550 ALMS1Q8TCU4 4167 aa8.33□□□□□ -1.08
DCLK2-201ENST00000296550 STARD9Q9P2P6 4700 aa8.32□□□□□ -1.08
DCLK2-201ENST00000296550 DNHD1Q96M86 4753 aa8.28□□□□□ -1.08
DCLK2-201ENST00000296550 DNAH17Q9UFH2 4485 aa8.25□□□□□ -1.09
DCLK2-201ENST00000296550 KRTAP10-4P60372 401 aaPredicted RBP8.24□□□□□ -1.09
DCLK2-201ENST00000296550 LUZP6Q538Z0 58 aa8.23□□□□□ -1.09
DCLK2-201ENST00000296550 C10orf95Q9H7T3 257 aa8.22□□□□□ -1.09
DCLK2-201ENST00000296550 DNAH3Q8TD57 4116 aa8.22□□□□□ -1.09
DCLK2-201ENST00000296550 PRKDCP78527 4128 aaKnown RBP8.22□□□□□ -1.09
DCLK2-201ENST00000296550 DNAH5Q8TE73 4624 aa8.17□□□□□ -1.1
DCLK2-201ENST00000296550 CMYA5Q8N3K9 4069 aa8.15□□□□□ -1.1
DCLK2-201ENST00000296550 DNAH8Q96JB1 4490 aa8.15□□□□□ -1.11
DCLK2-201ENST00000296550 LRP1BQ9NZR2 4599 aa8.11□□□□□ -1.11
DCLK2-201ENST00000296550 DNAH2Q9P225 4427 aa8.1□□□□□ -1.11
DCLK2-201ENST00000296550 LYSTQ99698 3801 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms