RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 SPINK7P58062 85 aa8.21□□□□□ -1.1
HPS3-201ENST00000296051 LINC00472Q9H8W2 130 aa8.21□□□□□ -1.1
HPS3-201ENST00000296051 PKD1L1Q8TDX9 2849 aa8.2□□□□□ -1.1
HPS3-201ENST00000296051 Q8N1X5 172 aa8.19□□□□□ -1.1
HPS3-201ENST00000296051 KRTAP10-1P60331 282 aa8.19□□□□□ -1.1
HPS3-201ENST00000296051 Q75L30 129 aa8.19□□□□□ -1.1
HPS3-201ENST00000296051 PLAC8Q9NZF1 115 aa8.19□□□□□ -1.1
HPS3-201ENST00000296051 SPINT4Q6UDR6 99 aa8.18□□□□□ -1.1
HPS3-201ENST00000296051 PDZD2O15018 2839 aa8.18□□□□□ -1.1
HPS3-201ENST00000296051 KRTAP4-16G5E9R7 235 aaPredicted RBP8.18□□□□□ -1.1
HPS3-201ENST00000296051 HRES1P13985 223 aa8.18□□□□□ -1.1
HPS3-201ENST00000296051 LINC01554Q52M75 96 aa8.17□□□□□ -1.1
HPS3-201ENST00000296051 TENM1Q9UKZ4 2725 aa8.17□□□□□ -1.1
HPS3-201ENST00000296051 FBN1P35555 2871 aaKnown RBP8.15□□□□□ -1.1
HPS3-201ENST00000296051 ZCCHC13Q8WW36 166 aaKnown RBP8.15□□□□□ -1.1
HPS3-201ENST00000296051 VWFP04275 2813 aa8.14□□□□□ -1.11
HPS3-201ENST00000296051 LINC01558Q9Y6Z2 57 aa8.13□□□□□ -1.11
HPS3-201ENST00000296051 NBPF19A0A087WUL8 3843 aa8.12□□□□□ -1.11
HPS3-201ENST00000296051 A0A0D9SG42 100 aa8.12□□□□□ -1.11
HPS3-201ENST00000296051 TENM2Q9NT68 2774 aa8.12□□□□□ -1.11
HPS3-201ENST00000296051 KRTAP29-1A8MX34 341 aaPredicted RBP8.09□□□□□ -1.11
HPS3-201ENST00000296051 KRTAP7-1Q8IUC3 87 aa8.09□□□□□ -1.11
HPS3-201ENST00000296051 PANO1I0J062 215 aa8.08□□□□□ -1.12
HPS3-201ENST00000296051 KRTAP11-1Q8IUC1 163 aa8.06□□□□□ -1.12
HPS3-201ENST00000296051 SPRR1BP22528 89 aa8.05□□□□□ -1.12
HPS3-201ENST00000296051 CRIPTQ9P021 101 aa8.04□□□□□ -1.12
HPS3-201ENST00000296051 A0A087X002 238 aa8.03□□□□□ -1.12
HPS3-201ENST00000296051 NOTCH2NLQ7Z3S9 236 aa8.03□□□□□ -1.12
HPS3-201ENST00000296051 ZNF469Q96JG9 3925 aaPredicted RBP8.03□□□□□ -1.12
HPS3-201ENST00000296051 Q6ZR54 194 aa8.03□□□□□ -1.12
HPS3-201ENST00000296051 OTOGQ6ZRI0 2925 aa8.03□□□□□ -1.12
HPS3-201ENST00000296051 KRTAP21-3Q3LHN1 58 aa7.99□□□□□ -1.13
HPS3-201ENST00000296051 Q5W150 140 aa7.98□□□□□ -1.13
HPS3-201ENST00000296051 SEC61BP60468 96 aaKnown RBP7.95□□□□□ -1.14
HPS3-201ENST00000296051 CSAG1Q6PB30 78 aa7.95□□□□□ -1.14
HPS3-201ENST00000296051 SRRM2Q9UQ35 2752 aaKnown RBP7.94□□□□□ -1.14
HPS3-201ENST00000296051 ADM2Q7Z4H4 148 aa7.88□□□□□ -1.15
HPS3-201ENST00000296051 H3BS24 57 aa7.88□□□□□ -1.15
HPS3-201ENST00000296051 A0A1B0GU33 70 aa7.86□□□□□ -1.15
HPS3-201ENST00000296051 AKAP9Q99996 3911 aa7.85□□□□□ -1.15
HPS3-201ENST00000296051 A6NN06 94 aa7.84□□□□□ -1.15
HPS3-201ENST00000296051 CAMK2N1Q7Z7J9 78 aa7.84□□□□□ -1.15
HPS3-201ENST00000296051 DMAC1Q96GE9 116 aa7.81□□□□□ -1.16
HPS3-201ENST00000296051 TGP01266 2768 aa7.8□□□□□ -1.16
HPS3-201ENST00000296051 Q6ZRN7 208 aaPredicted RBP7.79□□□□□ -1.16
HPS3-201ENST00000296051 TRRAPQ9Y4A5 3859 aa7.77□□□□□ -1.17
HPS3-201ENST00000296051 LINC00483Q53H64 154 aa7.77□□□□□ -1.17
HPS3-201ENST00000296051 S4R3F8 94 aa7.7□□□□□ -1.18
HPS3-201ENST00000296051 SPATA8Q6RVD6 105 aa7.69□□□□□ -1.18
HPS3-201ENST00000296051 R4GN34 69 aa7.68□□□□□ -1.18
HPS3-201ENST00000296051 KRTAP13-1Q8IUC0 172 aa7.67□□□□□ -1.18
HPS3-201ENST00000296051 LUZP6Q538Z0 58 aa7.65□□□□□ -1.19
HPS3-201ENST00000296051 KRTAP13-2Q52LG2 175 aa7.55□□□□□ -1.2
HPS3-201ENST00000296051 FBN3Q75N90 2809 aa7.55□□□□□ -1.2
HPS3-201ENST00000296051 H1FX-AS1Q4G0G2 97 aa7.54□□□□□ -1.2
HPS3-201ENST00000296051 CSMD3Q7Z407 3707 aa7.51□□□□□ -1.21
HPS3-201ENST00000296051 M0QZ58 72 aa7.5□□□□□ -1.21
HPS3-201ENST00000296051 RPL37P61927 97 aaKnown RBP7.49□□□□□ -1.21
HPS3-201ENST00000296051 COL7A1Q02388 2944 aa7.47□□□□□ -1.21
HPS3-201ENST00000296051 ROMO1P60602 79 aa7.45□□□□□ -1.22
HPS3-201ENST00000296051 ASB16-AS1Q495Z4 193 aa7.45□□□□□ -1.22
HPS3-201ENST00000296051 KRTAP25-1Q3LHN0 102 aa7.43□□□□□ -1.22
HPS3-201ENST00000296051 PLAC4Q8WY50 150 aa7.42□□□□□ -1.22
HPS3-201ENST00000296051 RPS29P62273 56 aaKnown RBP7.39□□□□□ -1.23
HPS3-201ENST00000296051 C20orf166-AS1Q96NR2 134 aa7.39□□□□□ -1.23
HPS3-201ENST00000296051 MEGF8Q7Z7M0 2845 aa7.34□□□□□ -1.23
HPS3-201ENST00000296051 ANK3Q12955 4377 aaKnown RBP7.3□□□□□ -1.24
HPS3-201ENST00000296051 A8MUU9 505 aa7.28□□□□□ -1.24
HPS3-201ENST00000296051 H0YAA0 97 aa7.27□□□□□ -1.25
HPS3-201ENST00000296051 NDUFAF8A1L188 74 aa7.25□□□□□ -1.25
HPS3-201ENST00000296051 KRTAP1-4P0C5Y4 121 aa7.22□□□□□ -1.25
HPS3-201ENST00000296051 KRTAP13-3Q3SY46 172 aa7.21□□□□□ -1.25
HPS3-201ENST00000296051 C10orf95Q9H7T3 257 aa7.21□□□□□ -1.25
HPS3-201ENST00000296051 KRTAP16-1A8MUX0 517 aa7.2□□□□□ -1.26
HPS3-201ENST00000296051 A0A0A0MQY5 61 aa7.19□□□□□ -1.26
HPS3-201ENST00000296051 XP32Q5T750 250 aa7.15□□□□□ -1.27
HPS3-201ENST00000296051 A0A1B0GVY2 172 aa7.14□□□□□ -1.27
HPS3-201ENST00000296051 ANK2Q01484 3957 aa7.1□□□□□ -1.27
HPS3-201ENST00000296051 TPRXLQ17RH7 258 aa7.04□□□□□ -1.28
HPS3-201ENST00000296051 KRTAP10-10P60014 251 aa6.98□□□□□ -1.29
HPS3-201ENST00000296051 P0C880 135 aa6.97□□□□□ -1.29
HPS3-201ENST00000296051 LYSTQ99698 3801 aa6.93□□□□□ -1.3
HPS3-201ENST00000296051 KRTAP10-8P60410 259 aa6.93□□□□□ -1.3
HPS3-201ENST00000296051 KRTAP3-1Q9BYR8 98 aa6.87□□□□□ -1.31
HPS3-201ENST00000296051 DNAH10Q8IVF4 4471 aa6.85□□□□□ -1.31
HPS3-201ENST00000296051 TNP1P09430 55 aa6.84□□□□□ -1.31
HPS3-201ENST00000296051 KRTAP12-2P59991 146 aa6.74□□□□□ -1.33
HPS3-201ENST00000296051 DNHD1Q96M86 4753 aa6.72□□□□□ -1.33
HPS3-201ENST00000296051 HUWE1Q7Z6Z7 4374 aaKnown RBP6.72□□□□□ -1.33
HPS3-201ENST00000296051 KRTAP13-4Q3LI77 160 aa6.71□□□□□ -1.33
HPS3-201ENST00000296051 PRO2289Q9P1D8 64 aa6.64□□□□□ -1.35
HPS3-201ENST00000296051 KRTAP10-6P60371 365 aaPredicted RBP6.63□□□□□ -1.35
HPS3-201ENST00000296051 DNAH7Q8WXX0 4024 aa6.62□□□□□ -1.35
HPS3-201ENST00000296051 DNAH9Q9NYC9 4486 aa6.61□□□□□ -1.35
HPS3-201ENST00000296051 KRTAP12-1P59990 96 aa6.6□□□□□ -1.35
HPS3-201ENST00000296051 KRTAP4-5Q9BYR2 181 aa6.55□□□□□ -1.36
HPS3-201ENST00000296051 PLECQ15149 4684 aaKnown RBP6.54□□□□□ -1.36
HPS3-201ENST00000296051 PP632Q6XCG6 107 aa6.51□□□□□ -1.37
HPS3-201ENST00000296051 KMT2AQ03164 3969 aa6.5□□□□□ -1.37
HPS3-201ENST00000296051 PRKDCP78527 4128 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms