RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 SSBP3-AS1Q7Z2R9 100 aa5.53□□□□□ -1.52
CLRN1-201ENST00000295911 FAM236DA0A1B0GTK5 79 aa5.52□□□□□ -1.53
CLRN1-201ENST00000295911 FAM236CP0DP71 79 aa5.52□□□□□ -1.53
CLRN1-201ENST00000295911 KRTAP10-1P60331 282 aa5.52□□□□□ -1.53
CLRN1-201ENST00000295911 CD164Q04900 197 aa5.52□□□□□ -1.53
CLRN1-201ENST00000295911 CASC2Q6XLA1 102 aa5.52□□□□□ -1.53
CLRN1-201ENST00000295911 DNHD1Q96M86 4753 aa5.51□□□□□ -1.53
CLRN1-201ENST00000295911 KRTAP29-1A8MX34 341 aaPredicted RBP5.51□□□□□ -1.53
CLRN1-201ENST00000295911 WFDC13Q8IUB5 93 aa5.51□□□□□ -1.53
CLRN1-201ENST00000295911 HRCT1Q6UXD1 115 aa5.5□□□□□ -1.53
CLRN1-201ENST00000295911 Q96NJ1 140 aa5.5□□□□□ -1.53
CLRN1-201ENST00000295911 ANAPC11Q9NYG5 84 aa5.5□□□□□ -1.53
CLRN1-201ENST00000295911 CDK2AP2O75956 126 aa5.49□□□□□ -1.53
CLRN1-201ENST00000295911 LINC00336Q6ZUF6 198 aa5.49□□□□□ -1.53
CLRN1-201ENST00000295911 FAM229BQ4G0N7 80 aa5.48□□□□□ -1.53
CLRN1-201ENST00000295911 FRAS1Q86XX4 4008 aa5.48□□□□□ -1.53
CLRN1-201ENST00000295911 MP68P56378 58 aa5.48□□□□□ -1.53
CLRN1-201ENST00000295911 MMP24-AS1A0A0U1RRL7 71 aa5.47□□□□□ -1.53
CLRN1-201ENST00000295911 H3BPC8 53 aa5.47□□□□□ -1.53
CLRN1-201ENST00000295911 SERP1Q9Y6X1 66 aa5.47□□□□□ -1.53
CLRN1-201ENST00000295911 A0A1B0GVX0 72 aa5.46□□□□□ -1.54
CLRN1-201ENST00000295911 hDV103S1A0JD37 113 aa5.46□□□□□ -1.54
CLRN1-201ENST00000295911 ASB16-AS1Q495Z4 193 aa5.46□□□□□ -1.54
CLRN1-201ENST00000295911 ZCCHC13Q8WW36 166 aaKnown RBP5.46□□□□□ -1.54
CLRN1-201ENST00000295911 TP53AIP1Q9HCN2 124 aa5.45□□□□□ -1.54
CLRN1-201ENST00000295911 C8orf17Q9NRJ1 99 aa5.45□□□□□ -1.54
CLRN1-201ENST00000295911 DNAH8Q96JB1 4490 aa5.45□□□□□ -1.54
CLRN1-201ENST00000295911 H0Y9P7 68 aa5.42□□□□□ -1.54
CLRN1-201ENST00000295911 PKD1P98161 4303 aa5.42□□□□□ -1.54
CLRN1-201ENST00000295911 IGHV6-1A0A0B4J1U7 121 aa5.41□□□□□ -1.54
CLRN1-201ENST00000295911 Q5XG85 94 aa5.41□□□□□ -1.54
CLRN1-201ENST00000295911 LINC00208Q96KT6 92 aa5.4□□□□□ -1.54
CLRN1-201ENST00000295911 DNAH11Q96DT5 4516 aa5.4□□□□□ -1.55
CLRN1-201ENST00000295911 A0A087X002 238 aa5.4□□□□□ -1.55
CLRN1-201ENST00000295911 TRAV22A0A0B4J277 110 aa5.4□□□□□ -1.55
CLRN1-201ENST00000295911 C8orf87E5RJ46 101 aa5.4□□□□□ -1.55
CLRN1-201ENST00000295911 KRTAP13-2Q52LG2 175 aa5.4□□□□□ -1.55
CLRN1-201ENST00000295911 SPINK6Q6UWN8 80 aa5.4□□□□□ -1.55
CLRN1-201ENST00000295911 MRPL34Q9BQ48 92 aaKnown RBP5.4□□□□□ -1.55
CLRN1-201ENST00000295911 LIMD2Q9BT23 127 aa5.39□□□□□ -1.55
CLRN1-201ENST00000295911 OXTP01178 125 aa5.38□□□□□ -1.55
CLRN1-201ENST00000295911 KRTAP1-4P0C5Y4 121 aa5.38□□□□□ -1.55
CLRN1-201ENST00000295911 C1orf64Q8NEQ6 169 aa5.38□□□□□ -1.55
CLRN1-201ENST00000295911 SMIM26A0A096LP01 95 aa5.37□□□□□ -1.55
CLRN1-201ENST00000295911 DNAH5Q8TE73 4624 aa5.36□□□□□ -1.55
CLRN1-201ENST00000295911 FAT2Q9NYQ8 4349 aa5.36□□□□□ -1.55
CLRN1-201ENST00000295911 A0A1B0GVY2 172 aa5.36□□□□□ -1.55
CLRN1-201ENST00000295911 NDUFS5O43920 106 aa5.36□□□□□ -1.55
CLRN1-201ENST00000295911 HYDINQ4G0P3 5121 aa5.35□□□□□ -1.55
CLRN1-201ENST00000295911 SPANXA2-OT1Q8N9U9 137 aa5.35□□□□□ -1.55
CLRN1-201ENST00000295911 TYMSOSQ8TAI1 123 aa5.35□□□□□ -1.55
CLRN1-201ENST00000295911 CYP4F30PQ9H0H9 118 aa5.35□□□□□ -1.55
CLRN1-201ENST00000295911 SPINK1P00995 79 aa5.34□□□□□ -1.55
CLRN1-201ENST00000295911 C1orf195Q5TG92 126 aa5.33□□□□□ -1.56
CLRN1-201ENST00000295911 LINC00313P59037 77 aa5.32□□□□□ -1.56
CLRN1-201ENST00000295911 SPAG11AQ6PDA7 123 aa5.32□□□□□ -1.56
CLRN1-201ENST00000295911 NOTCH2NLQ7Z3S9 236 aa5.32□□□□□ -1.56
CLRN1-201ENST00000295911 KRTAP9-8Q9BYQ0 159 aa5.32□□□□□ -1.56
CLRN1-201ENST00000295911 RPS29P62273 56 aaKnown RBP5.31□□□□□ -1.56
CLRN1-201ENST00000295911 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
CLRN1-201ENST00000295911 IGLV7-46A0A075B6I9 117 aa5.28□□□□□ -1.56
CLRN1-201ENST00000295911 LOC101927531A0A1B0GV80 90 aa5.28□□□□□ -1.56
CLRN1-201ENST00000295911 LINC00304Q8N9R0 145 aa5.28□□□□□ -1.56
CLRN1-201ENST00000295911 SMR3BP02814 79 aaPredicted RBP5.27□□□□□ -1.57
CLRN1-201ENST00000295911 Q8N9P0 234 aaPredicted RBP5.27□□□□□ -1.57
CLRN1-201ENST00000295911 FP248Q71RG6 208 aaPredicted RBP5.26□□□□□ -1.57
CLRN1-201ENST00000295911 PRR26Q8N8Z3 221 aa5.26□□□□□ -1.57
CLRN1-201ENST00000295911 LRP1BQ9NZR2 4599 aa5.25□□□□□ -1.57
CLRN1-201ENST00000295911 PRR4Q16378 134 aa5.25□□□□□ -1.57
CLRN1-201ENST00000295911 VPS13BQ7Z7G8 4022 aa5.25□□□□□ -1.57
CLRN1-201ENST00000295911 C4orf26Q17RF5 130 aa5.24□□□□□ -1.57
CLRN1-201ENST00000295911 KRTAP13-3Q3SY46 172 aa5.24□□□□□ -1.57
CLRN1-201ENST00000295911 SACSQ9NZJ4 4579 aa5.24□□□□□ -1.57
CLRN1-201ENST00000295911 KRTAP10-4P60372 401 aaPredicted RBP5.23□□□□□ -1.57
CLRN1-201ENST00000295911 PCOTHQ58A44 107 aa5.23□□□□□ -1.57
CLRN1-201ENST00000295911 A0A0A0MQY5 61 aa5.23□□□□□ -1.57
CLRN1-201ENST00000295911 KRTAP16-1A8MUX0 517 aa5.23□□□□□ -1.57
CLRN1-201ENST00000295911 Q5W150 140 aa5.23□□□□□ -1.57
CLRN1-201ENST00000295911 Q1T7F1 81 aa5.21□□□□□ -1.58
CLRN1-201ENST00000295911 V9GYY9 64 aa5.2□□□□□ -1.58
CLRN1-201ENST00000295911 PKHD1P08F94 4074 aa5.19□□□□□ -1.58
CLRN1-201ENST00000295911 MPLKIPQ8TAP9 179 aa5.19□□□□□ -1.58
CLRN1-201ENST00000295911 IGKV2-30P06310 120 aa5.17□□□□□ -1.58
CLRN1-201ENST00000295911 COA5Q86WW8 74 aa5.17□□□□□ -1.58
CLRN1-201ENST00000295911 ACYP2P14621 99 aa5.14□□□□□ -1.59
CLRN1-201ENST00000295911 RETNLBQ9BQ08 111 aa5.14□□□□□ -1.59
CLRN1-201ENST00000295911 DYNC1H1Q14204 4646 aaKnown RBP5.13□□□□□ -1.59
CLRN1-201ENST00000295911 HRES1P13985 223 aa5.13□□□□□ -1.59
CLRN1-201ENST00000295911 RYR2Q92736 4967 aa5.11□□□□□ -1.59
CLRN1-201ENST00000295911 PKHD1L1Q86WI1 4243 aa5.11□□□□□ -1.59
CLRN1-201ENST00000295911 Q5VSD8 79 aa5.1□□□□□ -1.59
CLRN1-201ENST00000295911 DMAC1Q96GE9 116 aa5.1□□□□□ -1.59
CLRN1-201ENST00000295911 APOBP04114 4563 aaKnown RBP5.1□□□□□ -1.59
CLRN1-201ENST00000295911 IGKV2D-30A0A075B6S6 120 aa5.08□□□□□ -1.6
CLRN1-201ENST00000295911 A8MUU9 505 aa5.08□□□□□ -1.6
CLRN1-201ENST00000295911 KRTAP10-8P60410 259 aa5.08□□□□□ -1.6
CLRN1-201ENST00000295911 C20orf166-AS1Q96NR2 134 aa5.08□□□□□ -1.6
CLRN1-201ENST00000295911 C7orf65Q6ZTY9 151 aa5.07□□□□□ -1.6
CLRN1-201ENST00000295911 C9orf92A6NGG3 77 aa5.06□□□□□ -1.6
CLRN1-201ENST00000295911 PSPHP1O15172 72 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms