RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 PCP4P48539 62 aa5.91□□□□□ -1.46
SNF8-201ENST00000290330 Q6JHZ5 121 aa5.91□□□□□ -1.46
SNF8-201ENST00000290330 LINC01547P58512 204 aaPredicted RBP5.9□□□□□ -1.46
SNF8-201ENST00000290330 RPS29P62273 56 aaKnown RBP5.9□□□□□ -1.46
SNF8-201ENST00000290330 KRTAP13-3Q3SY46 172 aa5.9□□□□□ -1.46
SNF8-201ENST00000290330 LCE1DQ5T752 114 aa5.9□□□□□ -1.46
SNF8-201ENST00000290330 ST20-AS1Q8NBB2 130 aa5.9□□□□□ -1.46
SNF8-201ENST00000290330 LINC00846Q9NV44 126 aa5.9□□□□□ -1.46
SNF8-201ENST00000290330 SPRR1BP22528 89 aa5.87□□□□□ -1.47
SNF8-201ENST00000290330 C9orf153Q5TBE3 101 aa5.87□□□□□ -1.47
SNF8-201ENST00000290330 FAT4Q6V0I7 4981 aa5.87□□□□□ -1.47
SNF8-201ENST00000290330 IGLV8-61A0A075B6I0 122 aa5.85□□□□□ -1.47
SNF8-201ENST00000290330 MUC17Q685J3 4493 aa5.85□□□□□ -1.47
SNF8-201ENST00000290330 CXCL6P80162 114 aa5.84□□□□□ -1.47
SNF8-201ENST00000290330 ASB16-AS1Q495Z4 193 aa5.83□□□□□ -1.48
SNF8-201ENST00000290330 Q6ZVQ6 151 aa5.83□□□□□ -1.48
SNF8-201ENST00000290330 SMIM29Q86T20 159 aa5.83□□□□□ -1.48
SNF8-201ENST00000290330 NREPQ16612 68 aa5.82□□□□□ -1.48
SNF8-201ENST00000290330 IGKV3D-7A0A0C4DH55 119 aa5.81□□□□□ -1.48
SNF8-201ENST00000290330 SEC61BP60468 96 aaKnown RBP5.8□□□□□ -1.48
SNF8-201ENST00000290330 ANAPC13Q9BS18 74 aa5.8□□□□□ -1.48
SNF8-201ENST00000290330 HRCT1Q6UXD1 115 aa5.79□□□□□ -1.48
SNF8-201ENST00000290330 FAM236AA0A1B0GUQ0 79 aa5.78□□□□□ -1.48
SNF8-201ENST00000290330 FAM236BA0A1B0GV22 79 aa5.78□□□□□ -1.48
SNF8-201ENST00000290330 A0A1W2PNM2 257 aa5.78□□□□□ -1.48
SNF8-201ENST00000290330 ATOX1O00244 68 aa5.78□□□□□ -1.48
SNF8-201ENST00000290330 HIST1H4AP62805 103 aaKnown RBP5.78□□□□□ -1.48
SNF8-201ENST00000290330 LIMD2Q9BT23 127 aa5.78□□□□□ -1.48
SNF8-201ENST00000290330 KRTAP4-1Q9BYQ7 146 aa5.78□□□□□ -1.48
SNF8-201ENST00000290330 BPY2O14599 106 aa5.77□□□□□ -1.49
SNF8-201ENST00000290330 IGFL1Q6UW32 110 aa5.77□□□□□ -1.49
SNF8-201ENST00000290330 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
SNF8-201ENST00000290330 CD164Q04900 197 aa5.76□□□□□ -1.49
SNF8-201ENST00000290330 SMIM20Q8N5G0 67 aa5.73□□□□□ -1.49
SNF8-201ENST00000290330 KRTAP4-2Q9BYR5 136 aa5.73□□□□□ -1.49
SNF8-201ENST00000290330 A0A0G2JQZ4 141 aa5.72□□□□□ -1.49
SNF8-201ENST00000290330 Q5XG85 94 aa5.72□□□□□ -1.49
SNF8-201ENST00000290330 SS18L2Q9UHA2 77 aa5.71□□□□□ -1.5
SNF8-201ENST00000290330 A0A087WSZ3 146 aa5.7□□□□□ -1.5
SNF8-201ENST00000290330 A0A087WVE0 104 aa5.7□□□□□ -1.5
SNF8-201ENST00000290330 C9orf92A6NGG3 77 aa5.7□□□□□ -1.5
SNF8-201ENST00000290330 J3KT08 172 aa5.7□□□□□ -1.5
SNF8-201ENST00000290330 C1orf195Q5TG92 126 aa5.69□□□□□ -1.5
SNF8-201ENST00000290330 UQCRQO14949 82 aa5.68□□□□□ -1.5
SNF8-201ENST00000290330 PCOTHQ58A44 107 aa5.68□□□□□ -1.5
SNF8-201ENST00000290330 IGKV4-1P06312 121 aa5.67□□□□□ -1.5
SNF8-201ENST00000290330 SERP2Q8N6R1 65 aa5.67□□□□□ -1.5
SNF8-201ENST00000290330 COX7CP15954 63 aa5.66□□□□□ -1.5
SNF8-201ENST00000290330 TRAV7A0A075B6U4 112 aa5.64□□□□□ -1.51
SNF8-201ENST00000290330 KRTAP19-2Q3LHN2 52 aa5.64□□□□□ -1.51
SNF8-201ENST00000290330 NDUFB1O75438 58 aa5.63□□□□□ -1.51
SNF8-201ENST00000290330 DSCR10P59022 87 aa5.63□□□□□ -1.51
SNF8-201ENST00000290330 LINC00472Q9H8W2 130 aa5.62□□□□□ -1.51
SNF8-201ENST00000290330 A8MWP4 228 aa5.61□□□□□ -1.51
SNF8-201ENST00000290330 Q8N9L7 120 aa5.61□□□□□ -1.51
SNF8-201ENST00000290330 HCG22E2RYF7 251 aa5.6□□□□□ -1.51
SNF8-201ENST00000290330 CCDC179H3BU77 68 aa5.6□□□□□ -1.51
SNF8-201ENST00000290330 K7EQZ3 153 aa5.6□□□□□ -1.51
SNF8-201ENST00000290330 RPL37P61927 97 aaKnown RBP5.6□□□□□ -1.51
SNF8-201ENST00000290330 PRR15Q8IV56 129 aa5.59□□□□□ -1.51
SNF8-201ENST00000290330 MT1HP80294 61 aa5.58□□□□□ -1.52
SNF8-201ENST00000290330 DEFB116Q30KQ4 102 aa5.56□□□□□ -1.52
SNF8-201ENST00000290330 CASC2Q6XLA1 102 aa5.54□□□□□ -1.52
SNF8-201ENST00000290330 Q96NJ1 140 aa5.54□□□□□ -1.52
SNF8-201ENST00000290330 OCR1Q9BZK8 76 aa5.54□□□□□ -1.52
SNF8-201ENST00000290330 A0A1B0GVX0 72 aa5.53□□□□□ -1.52
SNF8-201ENST00000290330 NDUFC1O43677 76 aa5.53□□□□□ -1.52
SNF8-201ENST00000290330 KRTAP4-11Q9BYQ6 195 aa5.53□□□□□ -1.52
SNF8-201ENST00000290330 C8orf87E5RJ46 101 aa5.51□□□□□ -1.53
SNF8-201ENST00000290330 KLKP1Q107X0 134 aa5.51□□□□□ -1.53
SNF8-201ENST00000290330 C5orf47Q569G3 176 aa5.51□□□□□ -1.53
SNF8-201ENST00000290330 WFDC13Q8IUB5 93 aa5.51□□□□□ -1.53
SNF8-201ENST00000290330 C20orf197Q8N268 126 aa5.51□□□□□ -1.53
SNF8-201ENST00000290330 MMP24-AS1A0A0U1RRL7 71 aa5.5□□□□□ -1.53
SNF8-201ENST00000290330 hDV103S1A0JD37 113 aa5.5□□□□□ -1.53
SNF8-201ENST00000290330 TMEM258P61165 79 aa5.5□□□□□ -1.53
SNF8-201ENST00000290330 Q75L30 129 aa5.49□□□□□ -1.53
SNF8-201ENST00000290330 TMEM254Q8TBM7 123 aa5.49□□□□□ -1.53
SNF8-201ENST00000290330 TP53AIP1Q9HCN2 124 aa5.49□□□□□ -1.53
SNF8-201ENST00000290330 C8orf17Q9NRJ1 99 aa5.49□□□□□ -1.53
SNF8-201ENST00000290330 IGHV6-1A0A0B4J1U7 121 aa5.48□□□□□ -1.53
SNF8-201ENST00000290330 H3BPC8 53 aa5.48□□□□□ -1.53
SNF8-201ENST00000290330 MP68P56378 58 aa5.48□□□□□ -1.53
SNF8-201ENST00000290330 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
SNF8-201ENST00000290330 COX6B2Q6YFQ2 88 aa5.48□□□□□ -1.53
SNF8-201ENST00000290330 ATP11AUNQ6ZP68 121 aa5.48□□□□□ -1.53
SNF8-201ENST00000290330 KRTAP10-6P60371 365 aaPredicted RBP5.47□□□□□ -1.53
SNF8-201ENST00000290330 FSIP2Q5CZC0 6907 aa5.46□□□□□ -1.54
SNF8-201ENST00000290330 M0R2T5 61 aa5.45□□□□□ -1.54
SNF8-201ENST00000290330 MRPL34Q9BQ48 92 aaKnown RBP5.45□□□□□ -1.54
SNF8-201ENST00000290330 ATP5EP56381 51 aaPredicted RBP5.44□□□□□ -1.54
SNF8-201ENST00000290330 C20orf166-AS1Q96NR2 134 aa5.43□□□□□ -1.54
SNF8-201ENST00000290330 CRCT1Q9UGL9 99 aa5.43□□□□□ -1.54
SNF8-201ENST00000290330 A8MUU9 505 aa5.42□□□□□ -1.54
SNF8-201ENST00000290330 LINC00313P59037 77 aa5.42□□□□□ -1.54
SNF8-201ENST00000290330 SNURFQ9Y675 71 aa5.42□□□□□ -1.54
SNF8-201ENST00000290330 TRAV22A0A0B4J277 110 aa5.41□□□□□ -1.54
SNF8-201ENST00000290330 H0Y9P7 68 aa5.41□□□□□ -1.54
SNF8-201ENST00000290330 H7BZZ5 65 aa5.41□□□□□ -1.54
SNF8-201ENST00000290330 NDUFS5O43920 106 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms