RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 FAM218AQ96MZ4 157 aa5.19□□□□□ -1.58
PTPDC1-201ENST00000288976 ACYP2P14621 99 aa5.18□□□□□ -1.58
PTPDC1-201ENST00000288976 SPAG11AQ6PDA7 123 aa5.18□□□□□ -1.58
PTPDC1-201ENST00000288976 K7EQZ3 153 aa5.18□□□□□ -1.58
PTPDC1-201ENST00000288976 KRTAP11-1Q8IUC1 163 aa5.18□□□□□ -1.58
PTPDC1-201ENST00000288976 COX7CP15954 63 aa5.18□□□□□ -1.58
PTPDC1-201ENST00000288976 FAM240AA0A1B0GVK7 77 aa5.17□□□□□ -1.58
PTPDC1-201ENST00000288976 SSBP3-AS1Q7Z2R9 100 aa5.17□□□□□ -1.58
PTPDC1-201ENST00000288976 TMEM254Q8TBM7 123 aa5.17□□□□□ -1.58
PTPDC1-201ENST00000288976 RBM12B-AS1Q9P1G2 102 aa5.16□□□□□ -1.58
PTPDC1-201ENST00000288976 HSPG2P98160 4391 aa5.16□□□□□ -1.58
PTPDC1-201ENST00000288976 TRAV7A0A075B6U4 112 aa5.15□□□□□ -1.59
PTPDC1-201ENST00000288976 RYR1P21817 5038 aa5.15□□□□□ -1.59
PTPDC1-201ENST00000288976 Q5VSD8 79 aa5.15□□□□□ -1.59
PTPDC1-201ENST00000288976 ERC2-IT1O76042 136 aa5.14□□□□□ -1.59
PTPDC1-201ENST00000288976 LINC01600Q96MT4 127 aa5.14□□□□□ -1.59
PTPDC1-201ENST00000288976 NDUFC1O43677 76 aa5.14□□□□□ -1.59
PTPDC1-201ENST00000288976 EPPK1P58107 5090 aaKnown RBP5.14□□□□□ -1.59
PTPDC1-201ENST00000288976 TRBV7-4A0A0J9YYF1 115 aa5.13□□□□□ -1.59
PTPDC1-201ENST00000288976 TRAV22A0A0B4J277 110 aa5.13□□□□□ -1.59
PTPDC1-201ENST00000288976 A0A1B0GU69 56 aa5.12□□□□□ -1.59
PTPDC1-201ENST00000288976 IGLV5-48A0A075B6I7 105 aa5.12□□□□□ -1.59
PTPDC1-201ENST00000288976 KRTAP10-4P60372 401 aaPredicted RBP5.12□□□□□ -1.59
PTPDC1-201ENST00000288976 LINC00483Q53H64 154 aa5.11□□□□□ -1.59
PTPDC1-201ENST00000288976 IGFL1Q6UW32 110 aa5.11□□□□□ -1.59
PTPDC1-201ENST00000288976 V9GYY9 64 aa5.11□□□□□ -1.59
PTPDC1-201ENST00000288976 SPRR1BP22528 89 aa5.11□□□□□ -1.59
PTPDC1-201ENST00000288976 Q8N1X5 172 aa5.11□□□□□ -1.59
PTPDC1-201ENST00000288976 BIRC6Q9NR09 4857 aa5.11□□□□□ -1.59
PTPDC1-201ENST00000288976 MRPL34Q9BQ48 92 aaKnown RBP5.1□□□□□ -1.59
PTPDC1-201ENST00000288976 TP53AIP1Q9HCN2 124 aa5.09□□□□□ -1.59
PTPDC1-201ENST00000288976 Q6ZQT0 140 aa5.09□□□□□ -1.59
PTPDC1-201ENST00000288976 SPRR4Q96PI1 79 aa5.09□□□□□ -1.6
PTPDC1-201ENST00000288976 A0A0D9SG42 100 aa5.08□□□□□ -1.6
PTPDC1-201ENST00000288976 FAM229BQ4G0N7 80 aa5.08□□□□□ -1.6
PTPDC1-201ENST00000288976 Q8N377 158 aa5.07□□□□□ -1.6
PTPDC1-201ENST00000288976 SPINT4Q6UDR6 99 aa5.07□□□□□ -1.6
PTPDC1-201ENST00000288976 PMAIP1Q13794 54 aa5.06□□□□□ -1.6
PTPDC1-201ENST00000288976 A8MWP4 228 aa5.05□□□□□ -1.6
PTPDC1-201ENST00000288976 C8orf87E5RJ46 101 aa5.05□□□□□ -1.6
PTPDC1-201ENST00000288976 C4orf26Q17RF5 130 aa5.05□□□□□ -1.6
PTPDC1-201ENST00000288976 C8orf17Q9NRJ1 99 aa5.05□□□□□ -1.6
PTPDC1-201ENST00000288976 CXCL6P80162 114 aa5.03□□□□□ -1.6
PTPDC1-201ENST00000288976 A0A1B0GVX0 72 aa5.02□□□□□ -1.61
PTPDC1-201ENST00000288976 KRTAP1-4P0C5Y4 121 aa5.02□□□□□ -1.61
PTPDC1-201ENST00000288976 ATP5EP56381 51 aaPredicted RBP5.02□□□□□ -1.61
PTPDC1-201ENST00000288976 HERC2O95714 4834 aa5.02□□□□□ -1.61
PTPDC1-201ENST00000288976 CAMK2N1Q7Z7J9 78 aa5.01□□□□□ -1.61
PTPDC1-201ENST00000288976 SMIM26A0A096LP01 95 aa5.01□□□□□ -1.61
PTPDC1-201ENST00000288976 RPS28P62857 69 aaKnown RBP5.01□□□□□ -1.61
PTPDC1-201ENST00000288976 FAT1Q14517 4588 aa5.01□□□□□ -1.61
PTPDC1-201ENST00000288976 LOC110117498A0A087WWA1 95 aa5□□□□□ -1.61
PTPDC1-201ENST00000288976 LOC101927531A0A1B0GV80 90 aa5□□□□□ -1.61
PTPDC1-201ENST00000288976 PRR15Q8IV56 129 aa5□□□□□ -1.61
PTPDC1-201ENST00000288976 A0A1B0GW54 56 aa4.98□□□□□ -1.61
PTPDC1-201ENST00000288976 FAT3Q8TDW7 4589 aa4.98□□□□□ -1.61
PTPDC1-201ENST00000288976 KRTAP17-1Q9BYP8 105 aa4.97□□□□□ -1.61
PTPDC1-201ENST00000288976 CD164Q04900 197 aa4.97□□□□□ -1.61
PTPDC1-201ENST00000288976 KIAA1109Q2LD37 5005 aa4.97□□□□□ -1.61
PTPDC1-201ENST00000288976 TNXBP22105 4242 aa4.97□□□□□ -1.61
PTPDC1-201ENST00000288976 CYSTM1Q9H1C7 97 aa4.97□□□□□ -1.61
PTPDC1-201ENST00000288976 OXTP01178 125 aa4.96□□□□□ -1.61
PTPDC1-201ENST00000288976 A0A1W2PNM2 257 aa4.95□□□□□ -1.62
PTPDC1-201ENST00000288976 SEC61BP60468 96 aaKnown RBP4.95□□□□□ -1.62
PTPDC1-201ENST00000288976 C1orf195Q5TG92 126 aa4.95□□□□□ -1.62
PTPDC1-201ENST00000288976 RPS29P62273 56 aaKnown RBP4.95□□□□□ -1.62
PTPDC1-201ENST00000288976 KRTAP13-2Q52LG2 175 aa4.95□□□□□ -1.62
PTPDC1-201ENST00000288976 A0A087X002 238 aa4.94□□□□□ -1.62
PTPDC1-201ENST00000288976 PRO0628Q9UI54 55 aa4.94□□□□□ -1.62
PTPDC1-201ENST00000288976 KRTAP29-1A8MX34 341 aaPredicted RBP4.92□□□□□ -1.62
PTPDC1-201ENST00000288976 Q5XG85 94 aa4.92□□□□□ -1.62
PTPDC1-201ENST00000288976 KRTAP10-8P60410 259 aa4.91□□□□□ -1.62
PTPDC1-201ENST00000288976 ASB16-AS1Q495Z4 193 aa4.89□□□□□ -1.63
PTPDC1-201ENST00000288976 CSAG1Q6PB30 78 aa4.88□□□□□ -1.63
PTPDC1-201ENST00000288976 COA5Q86WW8 74 aa4.88□□□□□ -1.63
PTPDC1-201ENST00000288976 KRTAP4-5Q9BYR2 181 aa4.88□□□□□ -1.63
PTPDC1-201ENST00000288976 CRIPTQ9P021 101 aa4.87□□□□□ -1.63
PTPDC1-201ENST00000288976 SPINK7P58062 85 aa4.86□□□□□ -1.63
PTPDC1-201ENST00000288976 H3BPC8 53 aa4.86□□□□□ -1.63
PTPDC1-201ENST00000288976 ABCA13Q86UQ4 5058 aa4.86□□□□□ -1.63
PTPDC1-201ENST00000288976 MT1HL1P0DM35 61 aa4.86□□□□□ -1.63
PTPDC1-201ENST00000288976 UQCR11O14957 56 aa4.85□□□□□ -1.63
PTPDC1-201ENST00000288976 A8MUN3 132 aa4.84□□□□□ -1.63
PTPDC1-201ENST00000288976 R4GN34 69 aa4.84□□□□□ -1.63
PTPDC1-201ENST00000288976 H7BZZ5 65 aa4.84□□□□□ -1.63
PTPDC1-201ENST00000288976 MYCBP2O75592 4640 aa4.83□□□□□ -1.64
PTPDC1-201ENST00000288976 Q8N9P0 234 aaPredicted RBP4.81□□□□□ -1.64
PTPDC1-201ENST00000288976 KLKP1Q107X0 134 aa4.8□□□□□ -1.64
PTPDC1-201ENST00000288976 LRP1Q07954 4544 aaKnown RBP4.8□□□□□ -1.64
PTPDC1-201ENST00000288976 LINC00472Q9H8W2 130 aa4.79□□□□□ -1.64
PTPDC1-201ENST00000288976 PCLOQ9Y6V0 5065 aa4.79□□□□□ -1.64
PTPDC1-201ENST00000288976 FP248Q71RG6 208 aaPredicted RBP4.78□□□□□ -1.64
PTPDC1-201ENST00000288976 MIR22HGQ0VDD5 57 aa4.78□□□□□ -1.64
PTPDC1-201ENST00000288976 ZCCHC13Q8WW36 166 aaKnown RBP4.78□□□□□ -1.64
PTPDC1-201ENST00000288976 HRES1P13985 223 aa4.76□□□□□ -1.65
PTPDC1-201ENST00000288976 PLAC4Q8WY50 150 aa4.74□□□□□ -1.65
PTPDC1-201ENST00000288976 S4R3F8 94 aa4.74□□□□□ -1.65
PTPDC1-201ENST00000288976 M0QZ58 72 aa4.71□□□□□ -1.66
PTPDC1-201ENST00000288976 LCA10Q71F78 164 aa4.71□□□□□ -1.66
PTPDC1-201ENST00000288976 A0A1B0GU33 70 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms