RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 C21orf62-AS1Q17RA5 79 aa10.62□□□□□ -0.71
TIMP4-201ENST00000287814 A0A1B0GW54 56 aa10.61□□□□□ -0.71
TIMP4-201ENST00000287814 NOTCH2NLQ7Z3S9 236 aa10.6□□□□□ -0.71
TIMP4-201ENST00000287814 Q75L30 129 aa10.57□□□□□ -0.72
TIMP4-201ENST00000287814 FAT4Q6V0I7 4981 aa10.56□□□□□ -0.72
TIMP4-201ENST00000287814 LINC00313P59037 77 aa10.56□□□□□ -0.72
TIMP4-201ENST00000287814 IGHV6-1A0A0B4J1U7 121 aa10.54□□□□□ -0.72
TIMP4-201ENST00000287814 C20orf166-AS1Q96NR2 134 aa10.54□□□□□ -0.72
TIMP4-201ENST00000287814 KRTAP16-1A8MUX0 517 aa10.53□□□□□ -0.72
TIMP4-201ENST00000287814 J3KT08 172 aa10.53□□□□□ -0.72
TIMP4-201ENST00000287814 A0A1B0GVX0 72 aa10.52□□□□□ -0.73
TIMP4-201ENST00000287814 A8MUU9 505 aa10.52□□□□□ -0.73
TIMP4-201ENST00000287814 A0A0U1RQV1 116 aa10.51□□□□□ -0.73
TIMP4-201ENST00000287814 NREPQ16612 68 aa10.5□□□□□ -0.73
TIMP4-201ENST00000287814 FAM240AA0A1B0GVK7 77 aa10.47□□□□□ -0.73
TIMP4-201ENST00000287814 ATP11AUNQ6ZP68 121 aa10.47□□□□□ -0.73
TIMP4-201ENST00000287814 PCP4P48539 62 aa10.46□□□□□ -0.74
TIMP4-201ENST00000287814 C8orf87E5RJ46 101 aa10.45□□□□□ -0.74
TIMP4-201ENST00000287814 ACYP1P07311 99 aa10.45□□□□□ -0.74
TIMP4-201ENST00000287814 IGKV3D-7A0A0C4DH55 119 aa10.44□□□□□ -0.74
TIMP4-201ENST00000287814 A8MWP4 228 aa10.44□□□□□ -0.74
TIMP4-201ENST00000287814 NDUFB1O75438 58 aa10.43□□□□□ -0.74
TIMP4-201ENST00000287814 KRTAP19-2Q3LHN2 52 aa10.41□□□□□ -0.74
TIMP4-201ENST00000287814 LINC00846Q9NV44 126 aa10.41□□□□□ -0.74
TIMP4-201ENST00000287814 LCE2AQ5TA79 106 aaPredicted RBP10.39□□□□□ -0.75
TIMP4-201ENST00000287814 Q6ZVQ6 151 aa10.39□□□□□ -0.75
TIMP4-201ENST00000287814 PRR15Q8IV56 129 aa10.38□□□□□ -0.75
TIMP4-201ENST00000287814 C8orf17Q9NRJ1 99 aa10.38□□□□□ -0.75
TIMP4-201ENST00000287814 LCE2CQ5TA81 110 aa10.37□□□□□ -0.75
TIMP4-201ENST00000287814 SCGB1A1P11684 91 aa10.35□□□□□ -0.75
TIMP4-201ENST00000287814 K7EQZ3 153 aa10.34□□□□□ -0.75
TIMP4-201ENST00000287814 BPY2O14599 106 aa10.34□□□□□ -0.75
TIMP4-201ENST00000287814 UBL5Q9BZL1 73 aa10.31□□□□□ -0.76
TIMP4-201ENST00000287814 Q8N9P0 234 aaPredicted RBP10.31□□□□□ -0.76
TIMP4-201ENST00000287814 MMP24-AS1A0A0U1RRL7 71 aa10.3□□□□□ -0.76
TIMP4-201ENST00000287814 LINC00643Q86TS7 51 aa10.28□□□□□ -0.76
TIMP4-201ENST00000287814 Q8N9L7 120 aa10.28□□□□□ -0.76
TIMP4-201ENST00000287814 MT-ATP8P03928 68 aa10.26□□□□□ -0.77
TIMP4-201ENST00000287814 ZCCHC13Q8WW36 166 aaKnown RBP10.22□□□□□ -0.77
TIMP4-201ENST00000287814 TMEM254Q8TBM7 123 aa10.22□□□□□ -0.77
TIMP4-201ENST00000287814 MRPL34Q9BQ48 92 aaKnown RBP10.22□□□□□ -0.77
TIMP4-201ENST00000287814 hDV103S1A0JD37 113 aa10.21□□□□□ -0.78
TIMP4-201ENST00000287814 MT1HP80294 61 aa10.18□□□□□ -0.78
TIMP4-201ENST00000287814 COX6B2Q6YFQ2 88 aa10.16□□□□□ -0.78
TIMP4-201ENST00000287814 ATP5EP2Q5VTU8 51 aa10.15□□□□□ -0.78
TIMP4-201ENST00000287814 WFDC13Q8IUB5 93 aa10.15□□□□□ -0.79
TIMP4-201ENST00000287814 CXCL6P80162 114 aa10.13□□□□□ -0.79
TIMP4-201ENST00000287814 CASC2Q6XLA1 102 aa10.12□□□□□ -0.79
TIMP4-201ENST00000287814 HRES1P13985 223 aa10.11□□□□□ -0.79
TIMP4-201ENST00000287814 NDUFS5O43920 106 aa10.1□□□□□ -0.79
TIMP4-201ENST00000287814 IMUPQ9GZP8 106 aa10.09□□□□□ -0.79
TIMP4-201ENST00000287814 SPINK7P58062 85 aa10.09□□□□□ -0.79
TIMP4-201ENST00000287814 HIST1H4AP62805 103 aaKnown RBP10.09□□□□□ -0.79
TIMP4-201ENST00000287814 MPLKIPQ8TAP9 179 aa10.08□□□□□ -0.8
TIMP4-201ENST00000287814 FLGP20930 4061 aaPredicted RBP10.07□□□□□ -0.8
TIMP4-201ENST00000287814 HCG22E2RYF7 251 aa10.06□□□□□ -0.8
TIMP4-201ENST00000287814 A0A087WVE0 104 aa10.05□□□□□ -0.8
TIMP4-201ENST00000287814 Q5W150 140 aa10.04□□□□□ -0.8
TIMP4-201ENST00000287814 ANAPC13Q9BS18 74 aa9.99□□□□□ -0.81
TIMP4-201ENST00000287814 RBM12B-AS1Q9P1G2 102 aa9.98□□□□□ -0.81
TIMP4-201ENST00000287814 M0R2T5 61 aa9.96□□□□□ -0.81
TIMP4-201ENST00000287814 FAM236AA0A1B0GUQ0 79 aa9.96□□□□□ -0.82
TIMP4-201ENST00000287814 FAM236BA0A1B0GV22 79 aa9.96□□□□□ -0.82
TIMP4-201ENST00000287814 FAM236DA0A1B0GTK5 79 aa9.95□□□□□ -0.82
TIMP4-201ENST00000287814 FAM236CP0DP71 79 aa9.95□□□□□ -0.82
TIMP4-201ENST00000287814 KRTAP10-6P60371 365 aaPredicted RBP9.93□□□□□ -0.82
TIMP4-201ENST00000287814 LORP23490 312 aaPredicted RBP9.92□□□□□ -0.82
TIMP4-201ENST00000287814 IGKV2D-30A0A075B6S6 120 aa9.89□□□□□ -0.83
TIMP4-201ENST00000287814 IGKV2-30P06310 120 aa9.89□□□□□ -0.83
TIMP4-201ENST00000287814 C7orf65Q6ZTY9 151 aa9.84□□□□□ -0.83
TIMP4-201ENST00000287814 TP53AIP1Q9HCN2 124 aa9.83□□□□□ -0.84
TIMP4-201ENST00000287814 KRTAP9-2Q9BYQ4 174 aa9.82□□□□□ -0.84
TIMP4-201ENST00000287814 ATOX1O00244 68 aa9.8□□□□□ -0.84
TIMP4-201ENST00000287814 CCDC179H3BU77 68 aa9.74□□□□□ -0.85
TIMP4-201ENST00000287814 C4orf26Q17RF5 130 aa9.71□□□□□ -0.85
TIMP4-201ENST00000287814 UQCRQO14949 82 aa9.71□□□□□ -0.86
TIMP4-201ENST00000287814 LCE2DQ5TA82 110 aaPredicted RBP9.71□□□□□ -0.86
TIMP4-201ENST00000287814 KRTAP9-8Q9BYQ0 159 aa9.71□□□□□ -0.86
TIMP4-201ENST00000287814 SMIM20Q8N5G0 67 aa9.69□□□□□ -0.86
TIMP4-201ENST00000287814 OCR1Q9BZK8 76 aa9.69□□□□□ -0.86
TIMP4-201ENST00000287814 COX7CP15954 63 aa9.68□□□□□ -0.86
TIMP4-201ENST00000287814 H1FX-AS1Q4G0G2 97 aa9.67□□□□□ -0.86
TIMP4-201ENST00000287814 SERP2Q8N6R1 65 aa9.67□□□□□ -0.86
TIMP4-201ENST00000287814 TRAV7A0A075B6U4 112 aa9.67□□□□□ -0.86
TIMP4-201ENST00000287814 TRAV22A0A0B4J277 110 aa9.67□□□□□ -0.86
TIMP4-201ENST00000287814 CYP4F30PQ9H0H9 118 aa9.63□□□□□ -0.87
TIMP4-201ENST00000287814 KRTAP3-1Q9BYR8 98 aa9.62□□□□□ -0.87
TIMP4-201ENST00000287814 MT2AP02795 61 aa9.59□□□□□ -0.87
TIMP4-201ENST00000287814 H0Y9P7 68 aa9.58□□□□□ -0.88
TIMP4-201ENST00000287814 LOC101927531A0A1B0GV80 90 aa9.57□□□□□ -0.88
TIMP4-201ENST00000287814 C1orf64Q8NEQ6 169 aa9.55□□□□□ -0.88
TIMP4-201ENST00000287814 MT1FP04733 61 aa9.53□□□□□ -0.88
TIMP4-201ENST00000287814 C5orf47Q569G3 176 aa9.52□□□□□ -0.89
TIMP4-201ENST00000287814 C20orf197Q8N268 126 aa9.51□□□□□ -0.89
TIMP4-201ENST00000287814 FSIP2Q5CZC0 6907 aa9.48□□□□□ -0.89
TIMP4-201ENST00000287814 MP68P56378 58 aa9.47□□□□□ -0.89
TIMP4-201ENST00000287814 LINC00208Q96KT6 92 aa9.47□□□□□ -0.89
TIMP4-201ENST00000287814 SNURFQ9Y675 71 aa9.47□□□□□ -0.89
TIMP4-201ENST00000287814 KRTAP10-10P60014 251 aa9.45□□□□□ -0.9
TIMP4-201ENST00000287814 KLKP1Q107X0 134 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms