RNA–Protein interactions for RNA: ENST00000287701.14

HMBOX1-201, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-201ENST00000287701 IGLV7-43P04211 117 aa5.79□□□□□ -1.48
HMBOX1-201ENST00000287701 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
HMBOX1-201ENST00000287701 TRRAPQ9Y4A5 3859 aa5.78□□□□□ -1.48
HMBOX1-201ENST00000287701 STAB1Q9NY15 2570 aa5.77□□□□□ -1.49
HMBOX1-201ENST00000287701 ZNF706Q9Y5V0 76 aaPredicted RBP5.77□□□□□ -1.49
HMBOX1-201ENST00000287701 ATRQ13535 2644 aa5.77□□□□□ -1.49
HMBOX1-201ENST00000287701 MEGF8Q7Z7M0 2845 aa5.76□□□□□ -1.49
HMBOX1-201ENST00000287701 IGLV9-49A0A0B4J1Y8 123 aa5.76□□□□□ -1.49
HMBOX1-201ENST00000287701 FAM229AH3BQW9 127 aa5.76□□□□□ -1.49
HMBOX1-201ENST00000287701 IGKV2-30P06310 120 aa5.76□□□□□ -1.49
HMBOX1-201ENST00000287701 C14orf177Q52M58 125 aa5.76□□□□□ -1.49
HMBOX1-201ENST00000287701 NBEAL1Q6ZS30 2694 aa5.76□□□□□ -1.49
HMBOX1-201ENST00000287701 SRRM2Q9UQ35 2752 aaKnown RBP5.74□□□□□ -1.49
HMBOX1-201ENST00000287701 WWC2-AS2Q96NR7 200 aa5.74□□□□□ -1.49
HMBOX1-201ENST00000287701 A8MUU9 505 aa5.73□□□□□ -1.49
HMBOX1-201ENST00000287701 DNAH3Q8TD57 4116 aa5.7□□□□□ -1.5
HMBOX1-201ENST00000287701 PRKDCP78527 4128 aaKnown RBP5.69□□□□□ -1.5
HMBOX1-201ENST00000287701 IGLV5-52A0A0A0MRZ9 124 aa5.68□□□□□ -1.5
HMBOX1-201ENST00000287701 LY6G6CO95867 125 aa5.68□□□□□ -1.5
HMBOX1-201ENST00000287701 TENM1Q9UKZ4 2725 aa5.67□□□□□ -1.5
HMBOX1-201ENST00000287701 COL7A1Q02388 2944 aa5.67□□□□□ -1.5
HMBOX1-201ENST00000287701 IGKV2D-30A0A075B6S6 120 aa5.66□□□□□ -1.5
HMBOX1-201ENST00000287701 KRTAP10-11P60412 298 aa5.66□□□□□ -1.5
HMBOX1-201ENST00000287701 LINC00304Q8N9R0 145 aa5.66□□□□□ -1.5
HMBOX1-201ENST00000287701 KRTAP1-5Q9BYS1 174 aa5.63□□□□□ -1.51
HMBOX1-201ENST00000287701 H0YAA0 97 aa5.61□□□□□ -1.51
HMBOX1-201ENST00000287701 SPINK6Q6UWN8 80 aa5.61□□□□□ -1.51
HMBOX1-201ENST00000287701 SPACA4Q8TDM5 124 aa5.61□□□□□ -1.51
HMBOX1-201ENST00000287701 P0C880 135 aa5.6□□□□□ -1.51
HMBOX1-201ENST00000287701 Q6ZSA8 131 aa5.59□□□□□ -1.51
HMBOX1-201ENST00000287701 PANO1I0J062 215 aa5.59□□□□□ -1.52
HMBOX1-201ENST00000287701 OXLD1Q5BKU9 147 aa5.59□□□□□ -1.52
HMBOX1-201ENST00000287701 KRTAP16-1A8MUX0 517 aa5.58□□□□□ -1.52
HMBOX1-201ENST00000287701 DYNC2H1Q8NCM8 4307 aaKnown RBP5.58□□□□□ -1.52
HMBOX1-201ENST00000287701 SSBP3-AS1Q7Z2R9 100 aa5.57□□□□□ -1.52
HMBOX1-201ENST00000287701 TENM3Q9P273 2699 aa5.56□□□□□ -1.52
HMBOX1-201ENST00000287701 ANAPC11Q9NYG5 84 aa5.55□□□□□ -1.52
HMBOX1-201ENST00000287701 DNAH10Q8IVF4 4471 aa5.54□□□□□ -1.52
HMBOX1-201ENST00000287701 LYSTQ99698 3801 aa5.54□□□□□ -1.52
HMBOX1-201ENST00000287701 PSORS1C2Q9UIG4 136 aa5.54□□□□□ -1.52
HMBOX1-201ENST00000287701 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.53□□□□□ -1.52
HMBOX1-201ENST00000287701 A0A1B0GU33 70 aa5.52□□□□□ -1.53
HMBOX1-201ENST00000287701 RYR3Q15413 4870 aa5.51□□□□□ -1.53
HMBOX1-201ENST00000287701 MGAM2Q2M2H8 2515 aa5.51□□□□□ -1.53
HMBOX1-201ENST00000287701 TGP01266 2768 aa5.51□□□□□ -1.53
HMBOX1-201ENST00000287701 H1FX-AS1Q4G0G2 97 aa5.51□□□□□ -1.53
HMBOX1-201ENST00000287701 CIRBP-AS1Q8TBR5 109 aa5.5□□□□□ -1.53
HMBOX1-201ENST00000287701 NOTCH1P46531 2555 aa5.5□□□□□ -1.53
HMBOX1-201ENST00000287701 DNAH9Q9NYC9 4486 aa5.5□□□□□ -1.53
HMBOX1-201ENST00000287701 K7ERS5 55 aa5.49□□□□□ -1.53
HMBOX1-201ENST00000287701 KMT2CQ8NEZ4 4911 aaKnown RBP5.49□□□□□ -1.53
HMBOX1-201ENST00000287701 Q6ZRN7 208 aaPredicted RBP5.48□□□□□ -1.53
HMBOX1-201ENST00000287701 DNAH7Q8WXX0 4024 aa5.48□□□□□ -1.53
HMBOX1-201ENST00000287701 UBE2DNLQ8IWF7 75 aa5.47□□□□□ -1.53
HMBOX1-201ENST00000287701 DNAH8Q96JB1 4490 aa5.47□□□□□ -1.53
HMBOX1-201ENST00000287701 NUPR2A6NF83 97 aa5.47□□□□□ -1.53
HMBOX1-201ENST00000287701 APLNQ9ULZ1 77 aa5.46□□□□□ -1.54
HMBOX1-201ENST00000287701 SPINK1P00995 79 aa5.46□□□□□ -1.54
HMBOX1-201ENST00000287701 TYMSOSQ8TAI1 123 aa5.44□□□□□ -1.54
HMBOX1-201ENST00000287701 A0A087WTM6 91 aa5.43□□□□□ -1.54
HMBOX1-201ENST00000287701 NBDYA0A0U1RRE5 68 aa5.43□□□□□ -1.54
HMBOX1-201ENST00000287701 FRAS1Q86XX4 4008 aa5.42□□□□□ -1.54
HMBOX1-201ENST00000287701 RYR2Q92736 4967 aa5.42□□□□□ -1.54
HMBOX1-201ENST00000287701 HUWE1Q7Z6Z7 4374 aaKnown RBP5.41□□□□□ -1.54
HMBOX1-201ENST00000287701 BIRC6Q9NR09 4857 aa5.41□□□□□ -1.54
HMBOX1-201ENST00000287701 Q8N1X5 172 aa5.41□□□□□ -1.54
HMBOX1-201ENST00000287701 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.55
HMBOX1-201ENST00000287701 C20orf166-AS1Q96NR2 134 aa5.4□□□□□ -1.55
HMBOX1-201ENST00000287701 SACSQ9NZJ4 4579 aa5.38□□□□□ -1.55
HMBOX1-201ENST00000287701 SPINT4Q6UDR6 99 aa5.37□□□□□ -1.55
HMBOX1-201ENST00000287701 LCE2DQ5TA82 110 aaPredicted RBP5.36□□□□□ -1.55
HMBOX1-201ENST00000287701 CRIPTQ9P021 101 aa5.35□□□□□ -1.55
HMBOX1-201ENST00000287701 VPS13DQ5THJ4 4388 aa5.35□□□□□ -1.55
HMBOX1-201ENST00000287701 KRTAP13-2Q52LG2 175 aa5.34□□□□□ -1.56
HMBOX1-201ENST00000287701 COX6B2Q6YFQ2 88 aa5.33□□□□□ -1.56
HMBOX1-201ENST00000287701 NDUFAF8A1L188 74 aa5.33□□□□□ -1.56
HMBOX1-201ENST00000287701 TPRXLQ17RH7 258 aa5.32□□□□□ -1.56
HMBOX1-201ENST00000287701 RPL37P61927 97 aaKnown RBP5.31□□□□□ -1.56
HMBOX1-201ENST00000287701 EPPK1P58107 5090 aaKnown RBP5.3□□□□□ -1.56
HMBOX1-201ENST00000287701 KRTAP3-1Q9BYR8 98 aa5.3□□□□□ -1.56
HMBOX1-201ENST00000287701 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
HMBOX1-201ENST00000287701 DNAH17Q9UFH2 4485 aa5.3□□□□□ -1.56
HMBOX1-201ENST00000287701 HECTD4Q9Y4D8 3996 aa5.27□□□□□ -1.57
HMBOX1-201ENST00000287701 DNAH6Q9C0G6 4158 aa5.26□□□□□ -1.57
HMBOX1-201ENST00000287701 PLECQ15149 4684 aaKnown RBP5.23□□□□□ -1.57
HMBOX1-201ENST00000287701 RPS29P62273 56 aaKnown RBP5.23□□□□□ -1.57
HMBOX1-201ENST00000287701 STARD9Q9P2P6 4700 aa5.23□□□□□ -1.57
HMBOX1-201ENST00000287701 STAB2Q8WWQ8 2551 aa5.22□□□□□ -1.57
HMBOX1-201ENST00000287701 KRTAP1-4P0C5Y4 121 aa5.2□□□□□ -1.58
HMBOX1-201ENST00000287701 HERC2O95714 4834 aa5.2□□□□□ -1.58
HMBOX1-201ENST00000287701 HYDINQ4G0P3 5121 aa5.2□□□□□ -1.58
HMBOX1-201ENST00000287701 FLG2Q5D862 2391 aaPredicted RBP5.18□□□□□ -1.58
HMBOX1-201ENST00000287701 KRTAP10-6P60371 365 aaPredicted RBP5.18□□□□□ -1.58
HMBOX1-201ENST00000287701 KRTAP17-1Q9BYP8 105 aa5.17□□□□□ -1.58
HMBOX1-201ENST00000287701 C10orf95Q9H7T3 257 aa5.15□□□□□ -1.58
HMBOX1-201ENST00000287701 KRTAP13-4Q3LI77 160 aa5.14□□□□□ -1.59
HMBOX1-201ENST00000287701 DNAH2Q9P225 4427 aa5.12□□□□□ -1.59
HMBOX1-201ENST00000287701 KRTAP3-3Q9BYR6 98 aa5.11□□□□□ -1.59
HMBOX1-201ENST00000287701 KRTAP3-2Q9BYR7 98 aa5.11□□□□□ -1.59
HMBOX1-201ENST00000287701 DNAH11Q96DT5 4516 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms