RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 Q8NBF4 154 aa6.93□□□□□ -1.3
SSRP1-201ENST00000278412 KRTAP13-2Q52LG2 175 aa6.93□□□□□ -1.3
SSRP1-201ENST00000278412 OCR1Q9BZK8 76 aa6.92□□□□□ -1.3
SSRP1-201ENST00000278412 Q8N9L7 120 aa6.92□□□□□ -1.3
SSRP1-201ENST00000278412 IGLV8-61A0A075B6I0 122 aa6.91□□□□□ -1.3
SSRP1-201ENST00000278412 A0A087WSZ3 146 aa6.91□□□□□ -1.3
SSRP1-201ENST00000278412 ZNF706Q9Y5V0 76 aaPredicted RBP6.89□□□□□ -1.31
SSRP1-201ENST00000278412 PLA2G1BP04054 148 aaKnown RBP6.87□□□□□ -1.31
SSRP1-201ENST00000278412 PRR26Q8N8Z3 221 aa6.87□□□□□ -1.31
SSRP1-201ENST00000278412 IGKV4-1P06312 121 aa6.86□□□□□ -1.31
SSRP1-201ENST00000278412 Q5VSD8 79 aa6.85□□□□□ -1.31
SSRP1-201ENST00000278412 C1orf64Q8NEQ6 169 aa6.85□□□□□ -1.31
SSRP1-201ENST00000278412 TRAV22A0A0B4J277 110 aa6.84□□□□□ -1.31
SSRP1-201ENST00000278412 DMBT1Q9UGM3 2413 aaPredicted RBP6.83□□□□□ -1.32
SSRP1-201ENST00000278412 ABCA13Q86UQ4 5058 aa6.83□□□□□ -1.32
SSRP1-201ENST00000278412 PSPHP1O15172 72 aa6.82□□□□□ -1.32
SSRP1-201ENST00000278412 KRTAP4-5Q9BYR2 181 aa6.82□□□□□ -1.32
SSRP1-201ENST00000278412 SPINK6Q6UWN8 80 aa6.82□□□□□ -1.32
SSRP1-201ENST00000278412 TNXBP22105 4242 aa6.81□□□□□ -1.32
SSRP1-201ENST00000278412 KTN1-AS1Q86SY8 53 aa6.81□□□□□ -1.32
SSRP1-201ENST00000278412 CYP4F30PQ9H0H9 118 aa6.8□□□□□ -1.32
SSRP1-201ENST00000278412 RBM12B-AS1Q9P1G2 102 aa6.8□□□□□ -1.32
SSRP1-201ENST00000278412 CDK2AP2O75956 126 aa6.8□□□□□ -1.32
SSRP1-201ENST00000278412 ZCCHC13Q8WW36 166 aaKnown RBP6.8□□□□□ -1.32
SSRP1-201ENST00000278412 FAT3Q8TDW7 4589 aa6.79□□□□□ -1.32
SSRP1-201ENST00000278412 DSCR10P59022 87 aa6.79□□□□□ -1.32
SSRP1-201ENST00000278412 Q96NJ1 140 aa6.78□□□□□ -1.32
SSRP1-201ENST00000278412 BIRC6Q9NR09 4857 aa6.78□□□□□ -1.32
SSRP1-201ENST00000278412 K7EQZ3 153 aa6.77□□□□□ -1.32
SSRP1-201ENST00000278412 A8MUN3 132 aa6.77□□□□□ -1.33
SSRP1-201ENST00000278412 FAM229AH3BQW9 127 aa6.77□□□□□ -1.33
SSRP1-201ENST00000278412 TYMSOSQ8TAI1 123 aa6.77□□□□□ -1.33
SSRP1-201ENST00000278412 Q5VV11 94 aa6.76□□□□□ -1.33
SSRP1-201ENST00000278412 LINC00472Q9H8W2 130 aa6.76□□□□□ -1.33
SSRP1-201ENST00000278412 A8MU10 97 aa6.75□□□□□ -1.33
SSRP1-201ENST00000278412 NDUFS5O43920 106 aa6.73□□□□□ -1.33
SSRP1-201ENST00000278412 SSBP3-AS1Q7Z2R9 100 aa6.73□□□□□ -1.33
SSRP1-201ENST00000278412 HERC2O95714 4834 aa6.72□□□□□ -1.33
SSRP1-201ENST00000278412 NOTCH2NLQ7Z3S9 236 aa6.72□□□□□ -1.33
SSRP1-201ENST00000278412 ATP11AUNQ6ZP68 121 aa6.7□□□□□ -1.34
SSRP1-201ENST00000278412 Q8N1X5 172 aa6.7□□□□□ -1.34
SSRP1-201ENST00000278412 A0A1B0GW54 56 aa6.69□□□□□ -1.34
SSRP1-201ENST00000278412 C4orf48Q5BLP8 95 aa6.69□□□□□ -1.34
SSRP1-201ENST00000278412 RETNLBQ9BQ08 111 aa6.68□□□□□ -1.34
SSRP1-201ENST00000278412 A6NN06 94 aa6.68□□□□□ -1.34
SSRP1-201ENST00000278412 WFDC13Q8IUB5 93 aa6.68□□□□□ -1.34
SSRP1-201ENST00000278412 LIMD2Q9BT23 127 aa6.68□□□□□ -1.34
SSRP1-201ENST00000278412 LINC00304Q8N9R0 145 aa6.67□□□□□ -1.34
SSRP1-201ENST00000278412 CHKB-CPT1BH3BT56 60 aa6.67□□□□□ -1.34
SSRP1-201ENST00000278412 NDUFB1O75438 58 aa6.67□□□□□ -1.34
SSRP1-201ENST00000278412 Q8N9P0 234 aaPredicted RBP6.66□□□□□ -1.34
SSRP1-201ENST00000278412 HCG22E2RYF7 251 aa6.66□□□□□ -1.34
SSRP1-201ENST00000278412 IGHV6-1A0A0B4J1U7 121 aa6.65□□□□□ -1.34
SSRP1-201ENST00000278412 PCLOQ9Y6V0 5065 aa6.65□□□□□ -1.34
SSRP1-201ENST00000278412 PRR4Q16378 134 aa6.64□□□□□ -1.35
SSRP1-201ENST00000278412 LCA10Q71F78 164 aa6.64□□□□□ -1.35
SSRP1-201ENST00000278412 A8MWP4 228 aa6.64□□□□□ -1.35
SSRP1-201ENST00000278412 Q75L30 129 aa6.63□□□□□ -1.35
SSRP1-201ENST00000278412 SPTSSBQ8NFR3 76 aa6.63□□□□□ -1.35
SSRP1-201ENST00000278412 C7orf65Q6ZTY9 151 aa6.62□□□□□ -1.35
SSRP1-201ENST00000278412 MT1HL1P0DM35 61 aa6.61□□□□□ -1.35
SSRP1-201ENST00000278412 PRR15LQ9BU68 103 aa6.61□□□□□ -1.35
SSRP1-201ENST00000278412 KRTAP10-8P60410 259 aa6.61□□□□□ -1.35
SSRP1-201ENST00000278412 SPANXA2-OT1Q8N9U9 137 aa6.61□□□□□ -1.35
SSRP1-201ENST00000278412 LOC101927531A0A1B0GV80 90 aa6.6□□□□□ -1.35
SSRP1-201ENST00000278412 MMP24-AS1A0A0U1RRL7 71 aa6.59□□□□□ -1.35
SSRP1-201ENST00000278412 SPINK1P00995 79 aa6.59□□□□□ -1.35
SSRP1-201ENST00000278412 LINC00208Q96KT6 92 aa6.59□□□□□ -1.35
SSRP1-201ENST00000278412 CDC42SE1Q9NRR8 79 aa6.59□□□□□ -1.35
SSRP1-201ENST00000278412 A0A1B0GVX0 72 aa6.58□□□□□ -1.36
SSRP1-201ENST00000278412 C8orf87E5RJ46 101 aa6.58□□□□□ -1.36
SSRP1-201ENST00000278412 KRTAP29-1A8MX34 341 aaPredicted RBP6.57□□□□□ -1.36
SSRP1-201ENST00000278412 A6NED7 52 aa6.56□□□□□ -1.36
SSRP1-201ENST00000278412 CASC2Q6XLA1 102 aa6.56□□□□□ -1.36
SSRP1-201ENST00000278412 C8orf17Q9NRJ1 99 aa6.56□□□□□ -1.36
SSRP1-201ENST00000278412 MP68P56378 58 aa6.55□□□□□ -1.36
SSRP1-201ENST00000278412 ASB16-AS1Q495Z4 193 aa6.55□□□□□ -1.36
SSRP1-201ENST00000278412 LPAP08519 4548 aa6.54□□□□□ -1.36
SSRP1-201ENST00000278412 C9orf92A6NGG3 77 aa6.53□□□□□ -1.36
SSRP1-201ENST00000278412 H3BPC8 53 aa6.53□□□□□ -1.36
SSRP1-201ENST00000278412 HERC1Q15751 4861 aa6.52□□□□□ -1.37
SSRP1-201ENST00000278412 SPAG11AQ6PDA7 123 aa6.51□□□□□ -1.37
SSRP1-201ENST00000278412 COA5Q86WW8 74 aa6.48□□□□□ -1.37
SSRP1-201ENST00000278412 LINC01558Q9Y6Z2 57 aa6.48□□□□□ -1.37
SSRP1-201ENST00000278412 KRTAP16-1A8MUX0 517 aa6.47□□□□□ -1.37
SSRP1-201ENST00000278412 LINC00313P59037 77 aa6.47□□□□□ -1.37
SSRP1-201ENST00000278412 LRP2P98164 4655 aa6.47□□□□□ -1.37
SSRP1-201ENST00000278412 H0Y9P7 68 aa6.46□□□□□ -1.38
SSRP1-201ENST00000278412 RPS29P62273 56 aaKnown RBP6.46□□□□□ -1.38
SSRP1-201ENST00000278412 H3BS24 57 aa6.45□□□□□ -1.38
SSRP1-201ENST00000278412 Q5W150 140 aa6.45□□□□□ -1.38
SSRP1-201ENST00000278412 MRPL34Q9BQ48 92 aaKnown RBP6.45□□□□□ -1.38
SSRP1-201ENST00000278412 IGLV7-46A0A075B6I9 117 aa6.43□□□□□ -1.38
SSRP1-201ENST00000278412 SPINK7P58062 85 aa6.4□□□□□ -1.38
SSRP1-201ENST00000278412 LINC01554Q52M75 96 aa6.38□□□□□ -1.39
SSRP1-201ENST00000278412 PRAC1Q96KF2 57 aa6.35□□□□□ -1.39
SSRP1-201ENST00000278412 J3QL48 77 aa6.35□□□□□ -1.39
SSRP1-201ENST00000278412 KRTAP13-3Q3SY46 172 aa6.35□□□□□ -1.39
SSRP1-201ENST00000278412 PCOTHQ58A44 107 aa6.31□□□□□ -1.4
SSRP1-201ENST00000278412 ADM2Q7Z4H4 148 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms