RNA–Protein interactions for RNA: ENST00000269122.7

CLTC-201, Transcript of clathrin heavy chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTC, Length 7,760 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-201ENST00000269122 Q5VSD8 79 aa4.67□□□□□ -1.66
CLTC-201ENST00000269122 PANO1I0J062 215 aa4.67□□□□□ -1.66
CLTC-201ENST00000269122 KRTAP29-1A8MX34 341 aaPredicted RBP4.66□□□□□ -1.66
CLTC-201ENST00000269122 C20orf166-AS1Q96NR2 134 aa4.66□□□□□ -1.66
CLTC-201ENST00000269122 UBR5O95071 2799 aaPredicted RBP4.65□□□□□ -1.66
CLTC-201ENST00000269122 PLAC8Q9NZF1 115 aa4.64□□□□□ -1.67
CLTC-201ENST00000269122 KRTAP10-2P60368 255 aa4.64□□□□□ -1.67
CLTC-201ENST00000269122 PLAC4Q8WY50 150 aa4.64□□□□□ -1.67
CLTC-201ENST00000269122 HELZ2Q9BYK8 2649 aaKnown RBP4.63□□□□□ -1.67
CLTC-201ENST00000269122 UTP20O75691 2785 aaKnown RBP4.63□□□□□ -1.67
CLTC-201ENST00000269122 BAHCC1Q9P281 2608 aa4.62□□□□□ -1.67
CLTC-201ENST00000269122 STAB1Q9NY15 2570 aa4.62□□□□□ -1.67
CLTC-201ENST00000269122 KRTAP11-1Q8IUC1 163 aa4.62□□□□□ -1.67
CLTC-201ENST00000269122 NSD1Q96L73 2696 aaPredicted RBP4.62□□□□□ -1.67
CLTC-201ENST00000269122 KRTAP10-1P60331 282 aa4.61□□□□□ -1.67
CLTC-201ENST00000269122 STAB2Q8WWQ8 2551 aa4.6□□□□□ -1.67
CLTC-201ENST00000269122 A8MUU9 505 aa4.6□□□□□ -1.67
CLTC-201ENST00000269122 KRTAP4-16G5E9R7 235 aaPredicted RBP4.6□□□□□ -1.67
CLTC-201ENST00000269122 SPRR1BP22528 89 aa4.6□□□□□ -1.67
CLTC-201ENST00000269122 FLNBO75369 2602 aaKnown RBP4.6□□□□□ -1.67
CLTC-201ENST00000269122 ASB16-AS1Q495Z4 193 aa4.59□□□□□ -1.67
CLTC-201ENST00000269122 C10orf95Q9H7T3 257 aa4.59□□□□□ -1.68
CLTC-201ENST00000269122 HIVEP1P15822 2718 aa4.58□□□□□ -1.68
CLTC-201ENST00000269122 CELSR1Q9NYQ6 3014 aa4.54□□□□□ -1.68
CLTC-201ENST00000269122 TEP1Q99973 2627 aaKnown RBP4.54□□□□□ -1.68
CLTC-201ENST00000269122 SETXQ7Z333 2677 aaKnown RBP4.53□□□□□ -1.68
CLTC-201ENST00000269122 CELSR2Q9HCU4 2923 aa4.53□□□□□ -1.68
CLTC-201ENST00000269122 NBPF19A0A087WUL8 3843 aa4.53□□□□□ -1.68
CLTC-201ENST00000269122 ZFHX3Q15911 3703 aa4.52□□□□□ -1.69
CLTC-201ENST00000269122 MUC3AQ02505 3323 aa4.51□□□□□ -1.69
CLTC-201ENST00000269122 ZNF292O60281 2723 aa4.51□□□□□ -1.69
CLTC-201ENST00000269122 KRTAP7-1Q8IUC3 87 aa4.5□□□□□ -1.69
CLTC-201ENST00000269122 ITPR2Q14571 2701 aa4.5□□□□□ -1.69
CLTC-201ENST00000269122 LCE6AA0A183 80 aa4.49□□□□□ -1.69
CLTC-201ENST00000269122 SEC61BP60468 96 aaKnown RBP4.49□□□□□ -1.69
CLTC-201ENST00000269122 FBN2P35556 2912 aa4.45□□□□□ -1.7
CLTC-201ENST00000269122 CSMD2Q7Z408 3487 aa4.45□□□□□ -1.7
CLTC-201ENST00000269122 H0YAA0 97 aa4.4□□□□□ -1.7
CLTC-201ENST00000269122 DCHS2Q6V1P9 2916 aa4.39□□□□□ -1.71
CLTC-201ENST00000269122 KRTAP10-8P60410 259 aa4.38□□□□□ -1.71
CLTC-201ENST00000269122 KRTAP13-2Q52LG2 175 aa4.38□□□□□ -1.71
CLTC-201ENST00000269122 KMT2BQ9UMN6 2715 aaPredicted RBP4.37□□□□□ -1.71
CLTC-201ENST00000269122 A0A1B0GVY2 172 aa4.35□□□□□ -1.71
CLTC-201ENST00000269122 NF1P21359 2839 aa4.33□□□□□ -1.72
CLTC-201ENST00000269122 ZANQ9Y493 2812 aa4.33□□□□□ -1.72
CLTC-201ENST00000269122 VPS13CQ709C8 3753 aa4.33□□□□□ -1.72
CLTC-201ENST00000269122 TNP1P09430 55 aa4.32□□□□□ -1.72
CLTC-201ENST00000269122 HRNRQ86YZ3 2850 aaPredicted RBP4.31□□□□□ -1.72
CLTC-201ENST00000269122 NIPBLQ6KC79 2804 aaeCLIP4.3□□□□□ -1.723e-6■■■■□ 20
CLTC-201ENST00000269122 IGSF10Q6WRI0 2623 aa4.29□□□□□ -1.72
CLTC-201ENST00000269122 KRTAP13-1Q8IUC0 172 aa4.29□□□□□ -1.72
CLTC-201ENST00000269122 TGP01266 2768 aa4.28□□□□□ -1.72
CLTC-201ENST00000269122 P0C880 135 aa4.27□□□□□ -1.73
CLTC-201ENST00000269122 CSMD3Q7Z407 3707 aa4.27□□□□□ -1.73
CLTC-201ENST00000269122 Q6ZRN7 208 aaPredicted RBP4.27□□□□□ -1.73
CLTC-201ENST00000269122 PDZD2O15018 2839 aa4.26□□□□□ -1.73
CLTC-201ENST00000269122 MXRA5Q9NR99 2828 aa4.25□□□□□ -1.73
CLTC-201ENST00000269122 SRRM2Q9UQ35 2752 aaKnown RBP4.24□□□□□ -1.73
CLTC-201ENST00000269122 FLNCQ14315 2725 aa4.21□□□□□ -1.74
CLTC-201ENST00000269122 BSNQ9UPA5 3926 aa4.18□□□□□ -1.74
CLTC-201ENST00000269122 TENM1Q9UKZ4 2725 aa4.17□□□□□ -1.74
CLTC-201ENST00000269122 RPS29P62273 56 aaKnown RBP4.16□□□□□ -1.74
CLTC-201ENST00000269122 KRTAP12-2P59991 146 aa4.14□□□□□ -1.75
CLTC-201ENST00000269122 VWFP04275 2813 aa4.12□□□□□ -1.75
CLTC-201ENST00000269122 PP632Q6XCG6 107 aa4.11□□□□□ -1.75
CLTC-201ENST00000269122 XP32Q5T750 250 aa4.09□□□□□ -1.75
CLTC-201ENST00000269122 TPRXLQ17RH7 258 aa4.09□□□□□ -1.75
CLTC-201ENST00000269122 TRRAPQ9Y4A5 3859 aa4.07□□□□□ -1.76
CLTC-201ENST00000269122 PKD1L1Q8TDX9 2849 aa4.07□□□□□ -1.76
CLTC-201ENST00000269122 KRTAP10-10P60014 251 aa4.07□□□□□ -1.76
CLTC-201ENST00000269122 KRTAP1-4P0C5Y4 121 aa4.06□□□□□ -1.76
CLTC-201ENST00000269122 FBN1P35555 2871 aaKnown RBP4.04□□□□□ -1.76
CLTC-201ENST00000269122 COL7A1Q02388 2944 aa4.02□□□□□ -1.77
CLTC-201ENST00000269122 TENM3Q9P273 2699 aa4.02□□□□□ -1.77
CLTC-201ENST00000269122 AKAP9Q99996 3911 aa4□□□□□ -1.77
CLTC-201ENST00000269122 TENM4Q6N022 2769 aa3.98□□□□□ -1.77
CLTC-201ENST00000269122 OTOGQ6ZRI0 2925 aa3.96□□□□□ -1.78
CLTC-201ENST00000269122 KRTAP13-3Q3SY46 172 aa3.96□□□□□ -1.78
CLTC-201ENST00000269122 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
CLTC-201ENST00000269122 MEGF8Q7Z7M0 2845 aa3.93□□□□□ -1.78
CLTC-201ENST00000269122 TENM2Q9NT68 2774 aa3.92□□□□□ -1.78
CLTC-201ENST00000269122 KRTAP13-4Q3LI77 160 aa3.91□□□□□ -1.78
CLTC-201ENST00000269122 ZNF469Q96JG9 3925 aaPredicted RBP3.88□□□□□ -1.79
CLTC-201ENST00000269122 FBN3Q75N90 2809 aa3.88□□□□□ -1.79
CLTC-201ENST00000269122 KRTAP3-1Q9BYR8 98 aa3.86□□□□□ -1.79
CLTC-201ENST00000269122 KRTAP15-1Q3LI76 137 aa3.85□□□□□ -1.79
CLTC-201ENST00000269122 PRO2289Q9P1D8 64 aa3.84□□□□□ -1.79
CLTC-201ENST00000269122 KRTAP21-3Q3LHN1 58 aa3.79□□□□□ -1.8
CLTC-201ENST00000269122 FRAS1Q86XX4 4008 aa3.77□□□□□ -1.81
CLTC-201ENST00000269122 CRCT1Q9UGL9 99 aa3.76□□□□□ -1.81
CLTC-201ENST00000269122 KRTAP10-6P60371 365 aaPredicted RBP3.76□□□□□ -1.81
CLTC-201ENST00000269122 ANK3Q12955 4377 aaKnown RBP3.74□□□□□ -1.81
CLTC-201ENST00000269122 ALMS1Q8TCU4 4167 aa3.67□□□□□ -1.82
CLTC-201ENST00000269122 HUWE1Q7Z6Z7 4374 aaKnown RBP3.65□□□□□ -1.83
CLTC-201ENST00000269122 INE1O15225 51 aa3.64□□□□□ -1.83
CLTC-201ENST00000269122 KRTAP3-3Q9BYR6 98 aa3.6□□□□□ -1.83
CLTC-201ENST00000269122 KRTAP3-2Q9BYR7 98 aa3.59□□□□□ -1.83
CLTC-201ENST00000269122 LYSTQ99698 3801 aa3.59□□□□□ -1.84
CLTC-201ENST00000269122 DNAH10Q8IVF4 4471 aa3.57□□□□□ -1.84
CLTC-201ENST00000269122 CMYA5Q8N3K9 4069 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms