RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 DSCR10P59022 87 aa7.17□□□□□ -1.26
COMMD4-201ENST00000267935 RBM3P98179 157 aaKnown RBP7.16□□□□□ -1.26
COMMD4-201ENST00000267935 SIGMAR1Q99720 223 aa7.16□□□□□ -1.26
COMMD4-201ENST00000267935 DSCR8Q96T75 97 aa7.15□□□□□ -1.26
COMMD4-201ENST00000267935 MTURNQ8N3F0 131 aa7.14□□□□□ -1.27
COMMD4-201ENST00000267935 SSPOA2VEC9 5147 aa7.13□□□□□ -1.27
COMMD4-201ENST00000267935 JMJD7-PLA2G4BH0Y9G9 81 aa7.13□□□□□ -1.27
COMMD4-201ENST00000267935 H3BT86 120 aa7.13□□□□□ -1.27
COMMD4-201ENST00000267935 USH2AO75445 5202 aa7.13□□□□□ -1.27
COMMD4-201ENST00000267935 A0A1W2PNM2 257 aa7.12□□□□□ -1.27
COMMD4-201ENST00000267935 K7EP34 96 aa7.12□□□□□ -1.27
COMMD4-201ENST00000267935 MT2AP02795 61 aa7.12□□□□□ -1.27
COMMD4-201ENST00000267935 IGKV4-1P06312 121 aa7.12□□□□□ -1.27
COMMD4-201ENST00000267935 KRTAP10-10P60014 251 aa7.12□□□□□ -1.27
COMMD4-201ENST00000267935 LINC00846Q9NV44 126 aa7.12□□□□□ -1.27
COMMD4-201ENST00000267935 CCKP06307 115 aa7.11□□□□□ -1.27
COMMD4-201ENST00000267935 VPS25Q9BRG1 176 aa7.11□□□□□ -1.27
COMMD4-201ENST00000267935 TRBV7-4A0A0J9YYF1 115 aa7.1□□□□□ -1.27
COMMD4-201ENST00000267935 GTF2H5Q6ZYL4 71 aa7.1□□□□□ -1.27
COMMD4-201ENST00000267935 KRTAP16-1A8MUX0 517 aa7.07□□□□□ -1.28
COMMD4-201ENST00000267935 KRTAP19-1Q8IUB9 90 aa7.07□□□□□ -1.28
COMMD4-201ENST00000267935 C14orf132Q9NPU4 83 aa7.07□□□□□ -1.28
COMMD4-201ENST00000267935 LOC110117498A0A087WWA1 95 aa7.05□□□□□ -1.28
COMMD4-201ENST00000267935 LCE2BO14633 110 aa7.05□□□□□ -1.28
COMMD4-201ENST00000267935 MT1FP04733 61 aa7.05□□□□□ -1.28
COMMD4-201ENST00000267935 HRES1P13985 223 aa7.05□□□□□ -1.28
COMMD4-201ENST00000267935 PDE6GP18545 87 aa7.05□□□□□ -1.28
COMMD4-201ENST00000267935 MPLKIPQ8TAP9 179 aa7.05□□□□□ -1.28
COMMD4-201ENST00000267935 SMCPP49901 116 aaPredicted RBP7.04□□□□□ -1.28
COMMD4-201ENST00000267935 Q6ZQT0 140 aa7.04□□□□□ -1.28
COMMD4-201ENST00000267935 KRTAP9-3Q9BYQ3 159 aa7.04□□□□□ -1.28
COMMD4-201ENST00000267935 IGHV6-1A0A0B4J1U7 121 aa7.03□□□□□ -1.28
COMMD4-201ENST00000267935 NOTCH2NLQ7Z3S9 236 aa7.03□□□□□ -1.28
COMMD4-201ENST00000267935 PRO0461Q9UI25 63 aa7.03□□□□□ -1.28
COMMD4-201ENST00000267935 FCGBPQ9Y6R7 5405 aaPredicted RBP7.03□□□□□ -1.28
COMMD4-201ENST00000267935 C21orf62-AS1Q17RA5 79 aa7.01□□□□□ -1.29
COMMD4-201ENST00000267935 DEFB116Q30KQ4 102 aa7.01□□□□□ -1.29
COMMD4-201ENST00000267935 C8orf87E5RJ46 101 aa7□□□□□ -1.29
COMMD4-201ENST00000267935 LINC00472Q9H8W2 130 aa7□□□□□ -1.29
COMMD4-201ENST00000267935 F8W1H4 67 aa6.99□□□□□ -1.29
COMMD4-201ENST00000267935 A0A1B0GW54 56 aa6.98□□□□□ -1.29
COMMD4-201ENST00000267935 A0A1B0GV90 55 aa6.95□□□□□ -1.3
COMMD4-201ENST00000267935 A0A1B0GVX0 72 aa6.94□□□□□ -1.3
COMMD4-201ENST00000267935 SPINK7P58062 85 aa6.94□□□□□ -1.3
COMMD4-201ENST00000267935 ZCCHC13Q8WW36 166 aaKnown RBP6.94□□□□□ -1.3
COMMD4-201ENST00000267935 ETDBQ3ZM63 59 aa6.93□□□□□ -1.3
COMMD4-201ENST00000267935 A8MWP4 228 aa6.92□□□□□ -1.3
COMMD4-201ENST00000267935 J3KT08 172 aa6.92□□□□□ -1.3
COMMD4-201ENST00000267935 NREPQ16612 68 aa6.92□□□□□ -1.3
COMMD4-201ENST00000267935 NDUFB1O75438 58 aa6.9□□□□□ -1.3
COMMD4-201ENST00000267935 KRTAP19-6Q3LI70 58 aa6.89□□□□□ -1.31
COMMD4-201ENST00000267935 Q6ZVQ6 151 aa6.84□□□□□ -1.31
COMMD4-201ENST00000267935 Q8N9P0 234 aaPredicted RBP6.84□□□□□ -1.31
COMMD4-201ENST00000267935 WFDC13Q8IUB5 93 aa6.83□□□□□ -1.32
COMMD4-201ENST00000267935 UBL5Q9BZL1 73 aa6.83□□□□□ -1.32
COMMD4-201ENST00000267935 MACF1Q9UPN3 7388 aaKnown RBP6.83□□□□□ -1.32
COMMD4-201ENST00000267935 BPY2O14599 106 aa6.82□□□□□ -1.32
COMMD4-201ENST00000267935 IGKV3D-7A0A0C4DH55 119 aa6.79□□□□□ -1.32
COMMD4-201ENST00000267935 SYNE2Q8WXH0 6885 aaKnown RBP6.77□□□□□ -1.33
COMMD4-201ENST00000267935 PRR15Q8IV56 129 aa6.77□□□□□ -1.33
COMMD4-201ENST00000267935 C8orf17Q9NRJ1 99 aa6.77□□□□□ -1.33
COMMD4-201ENST00000267935 KRTAP6-3Q3LI67 103 aa6.76□□□□□ -1.33
COMMD4-201ENST00000267935 K7EQZ3 153 aa6.75□□□□□ -1.33
COMMD4-201ENST00000267935 ACYP1P07311 99 aa6.75□□□□□ -1.33
COMMD4-201ENST00000267935 H1FX-AS1Q4G0G2 97 aa6.74□□□□□ -1.33
COMMD4-201ENST00000267935 FAM240AA0A1B0GVK7 77 aa6.72□□□□□ -1.33
COMMD4-201ENST00000267935 Q8N9L7 120 aa6.72□□□□□ -1.33
COMMD4-201ENST00000267935 MMP24-AS1A0A0U1RRL7 71 aa6.7□□□□□ -1.34
COMMD4-201ENST00000267935 J3QR89 54 aa6.69□□□□□ -1.34
COMMD4-201ENST00000267935 hDV103S1A0JD37 113 aa6.68□□□□□ -1.34
COMMD4-201ENST00000267935 CXCL6P80162 114 aa6.68□□□□□ -1.34
COMMD4-201ENST00000267935 TMEM254Q8TBM7 123 aa6.68□□□□□ -1.34
COMMD4-201ENST00000267935 MRPL34Q9BQ48 92 aaKnown RBP6.67□□□□□ -1.34
COMMD4-201ENST00000267935 NDUFS5O43920 106 aa6.65□□□□□ -1.34
COMMD4-201ENST00000267935 CASC2Q6XLA1 102 aa6.65□□□□□ -1.34
COMMD4-201ENST00000267935 HCG22E2RYF7 251 aa6.63□□□□□ -1.35
COMMD4-201ENST00000267935 ATP5EP2Q5VTU8 51 aa6.63□□□□□ -1.35
COMMD4-201ENST00000267935 LINC00643Q86TS7 51 aa6.61□□□□□ -1.35
COMMD4-201ENST00000267935 IGKV2D-30A0A075B6S6 120 aa6.6□□□□□ -1.35
COMMD4-201ENST00000267935 IGKV2-30P06310 120 aa6.6□□□□□ -1.35
COMMD4-201ENST00000267935 HIST1H4AP62805 103 aaKnown RBP6.59□□□□□ -1.35
COMMD4-201ENST00000267935 C7orf65Q6ZTY9 151 aa6.58□□□□□ -1.36
COMMD4-201ENST00000267935 K7ERU9 68 aa6.55□□□□□ -1.36
COMMD4-201ENST00000267935 FAM236AA0A1B0GUQ0 79 aa6.54□□□□□ -1.36
COMMD4-201ENST00000267935 FAM236BA0A1B0GV22 79 aa6.54□□□□□ -1.36
COMMD4-201ENST00000267935 A6NN06 94 aa6.54□□□□□ -1.36
COMMD4-201ENST00000267935 A0A087WVE0 104 aa6.49□□□□□ -1.37
COMMD4-201ENST00000267935 C4orf26Q17RF5 130 aa6.49□□□□□ -1.37
COMMD4-201ENST00000267935 Q5W150 140 aa6.49□□□□□ -1.37
COMMD4-201ENST00000267935 C5orf47Q569G3 176 aa6.48□□□□□ -1.37
COMMD4-201ENST00000267935 Q5VV11 94 aa6.48□□□□□ -1.37
COMMD4-201ENST00000267935 TP53AIP1Q9HCN2 124 aa6.48□□□□□ -1.37
COMMD4-201ENST00000267935 CSAG1Q6PB30 78 aa6.46□□□□□ -1.38
COMMD4-201ENST00000267935 S4R3F8 94 aa6.42□□□□□ -1.38
COMMD4-201ENST00000267935 MT-ATP8P03928 68 aa6.4□□□□□ -1.38
COMMD4-201ENST00000267935 NEBP20929 6669 aa6.4□□□□□ -1.39
COMMD4-201ENST00000267935 MT1BP07438 61 aa6.39□□□□□ -1.39
COMMD4-201ENST00000267935 KRTAP19-8Q3LI54 63 aa6.39□□□□□ -1.39
COMMD4-201ENST00000267935 KRTAP20-1Q3LI63 56 aa6.39□□□□□ -1.39
COMMD4-201ENST00000267935 SPRR2GQ9BYE4 73 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms