RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 LINC00472Q9H8W2 130 aa12.11□□□□□ -0.47
LYSMD2-201ENST00000267838 KRTAP13-2Q52LG2 175 aa12.1□□□□□ -0.47
LYSMD2-201ENST00000267838 CASC2Q6XLA1 102 aa12.1□□□□□ -0.47
LYSMD2-201ENST00000267838 CYP4F30PQ9H0H9 118 aa12.1□□□□□ -0.47
LYSMD2-201ENST00000267838 PRO0628Q9UI54 55 aa12.07□□□□□ -0.48
LYSMD2-201ENST00000267838 CD164Q04900 197 aa12.06□□□□□ -0.48
LYSMD2-201ENST00000267838 KRTAP10-4P60372 401 aaPredicted RBP12.05□□□□□ -0.48
LYSMD2-201ENST00000267838 TRAV22A0A0B4J277 110 aa12.05□□□□□ -0.48
LYSMD2-201ENST00000267838 PLA2G1BP04054 148 aaKnown RBP12.05□□□□□ -0.48
LYSMD2-201ENST00000267838 C1orf64Q8NEQ6 169 aa12.04□□□□□ -0.48
LYSMD2-201ENST00000267838 MPLKIPQ8TAP9 179 aa12.03□□□□□ -0.48
LYSMD2-201ENST00000267838 EPPK1P58107 5090 aaKnown RBP12.03□□□□□ -0.48
LYSMD2-201ENST00000267838 H0Y9P7 68 aa12.02□□□□□ -0.49
LYSMD2-201ENST00000267838 Q96NJ1 140 aa12.02□□□□□ -0.49
LYSMD2-201ENST00000267838 LINC00208Q96KT6 92 aa12□□□□□ -0.49
LYSMD2-201ENST00000267838 SPANXA2-OT1Q8N9U9 137 aa11.99□□□□□ -0.49
LYSMD2-201ENST00000267838 MMP24-AS1A0A0U1RRL7 71 aa11.96□□□□□ -0.49
LYSMD2-201ENST00000267838 Q1T7F1 81 aa11.96□□□□□ -0.49
LYSMD2-201ENST00000267838 CDK2AP2O75956 126 aa11.95□□□□□ -0.5
LYSMD2-201ENST00000267838 TYMSOSQ8TAI1 123 aa11.95□□□□□ -0.5
LYSMD2-201ENST00000267838 FAT1Q14517 4588 aa11.94□□□□□ -0.5
LYSMD2-201ENST00000267838 FAM229AH3BQW9 127 aa11.92□□□□□ -0.5
LYSMD2-201ENST00000267838 PRR26Q8N8Z3 221 aa11.91□□□□□ -0.5
LYSMD2-201ENST00000267838 TP53AIP1Q9HCN2 124 aa11.9□□□□□ -0.5
LYSMD2-201ENST00000267838 ASB16-AS1Q495Z4 193 aa11.9□□□□□ -0.51
LYSMD2-201ENST00000267838 PRR4Q16378 134 aa11.89□□□□□ -0.51
LYSMD2-201ENST00000267838 BRK1Q8WUW1 75 aa11.88□□□□□ -0.51
LYSMD2-201ENST00000267838 V9GYY9 64 aa11.88□□□□□ -0.51
LYSMD2-201ENST00000267838 HSPG2P98160 4391 aa11.87□□□□□ -0.51
LYSMD2-201ENST00000267838 C4orf48Q5BLP8 95 aa11.86□□□□□ -0.51
LYSMD2-201ENST00000267838 RYR1P21817 5038 aa11.85□□□□□ -0.51
LYSMD2-201ENST00000267838 Q5VSD8 79 aa11.84□□□□□ -0.51
LYSMD2-201ENST00000267838 LIMD2Q9BT23 127 aa11.84□□□□□ -0.51
LYSMD2-201ENST00000267838 C8orf17Q9NRJ1 99 aa11.84□□□□□ -0.51
LYSMD2-201ENST00000267838 A0A1B0GVX0 72 aa11.82□□□□□ -0.52
LYSMD2-201ENST00000267838 SPINK1P00995 79 aa11.82□□□□□ -0.52
LYSMD2-201ENST00000267838 KIAA1109Q2LD37 5005 aa11.81□□□□□ -0.52
LYSMD2-201ENST00000267838 LINC00304Q8N9R0 145 aa11.81□□□□□ -0.52
LYSMD2-201ENST00000267838 IGHV6-1A0A0B4J1U7 121 aa11.79□□□□□ -0.52
LYSMD2-201ENST00000267838 C1orf195Q5TG92 126 aa11.78□□□□□ -0.52
LYSMD2-201ENST00000267838 SPAG11AQ6PDA7 123 aa11.77□□□□□ -0.52
LYSMD2-201ENST00000267838 PKHD1L1Q86WI1 4243 aa11.77□□□□□ -0.52
LYSMD2-201ENST00000267838 IGLV7-46A0A075B6I9 117 aa11.75□□□□□ -0.53
LYSMD2-201ENST00000267838 RPS29P62273 56 aaKnown RBP11.74□□□□□ -0.53
LYSMD2-201ENST00000267838 MRPL34Q9BQ48 92 aaKnown RBP11.72□□□□□ -0.53
LYSMD2-201ENST00000267838 KRTAP17-1Q9BYP8 105 aa11.72□□□□□ -0.53
LYSMD2-201ENST00000267838 NOTCH2NLQ7Z3S9 236 aa11.69□□□□□ -0.54
LYSMD2-201ENST00000267838 PSPHP1O15172 72 aa11.69□□□□□ -0.54
LYSMD2-201ENST00000267838 NDUFS5O43920 106 aa11.69□□□□□ -0.54
LYSMD2-201ENST00000267838 Q8N1X5 172 aa11.67□□□□□ -0.54
LYSMD2-201ENST00000267838 COA5Q86WW8 74 aa11.65□□□□□ -0.54
LYSMD2-201ENST00000267838 BIRC6Q9NR09 4857 aa11.64□□□□□ -0.55
LYSMD2-201ENST00000267838 C8orf87E5RJ46 101 aa11.64□□□□□ -0.55
LYSMD2-201ENST00000267838 Q8N9P0 234 aaPredicted RBP11.64□□□□□ -0.55
LYSMD2-201ENST00000267838 PCOTHQ58A44 107 aa11.64□□□□□ -0.55
LYSMD2-201ENST00000267838 A8MUN3 132 aa11.62□□□□□ -0.55
LYSMD2-201ENST00000267838 LINC00313P59037 77 aa11.59□□□□□ -0.55
LYSMD2-201ENST00000267838 KRTAP10-8P60410 259 aa11.59□□□□□ -0.55
LYSMD2-201ENST00000267838 Q5VV11 94 aa11.59□□□□□ -0.55
LYSMD2-201ENST00000267838 LOC101927531A0A1B0GV80 90 aa11.58□□□□□ -0.56
LYSMD2-201ENST00000267838 PRR15LQ9BU68 103 aa11.53□□□□□ -0.56
LYSMD2-201ENST00000267838 Q75L30 129 aa11.49□□□□□ -0.57
LYSMD2-201ENST00000267838 LRP1Q07954 4544 aaKnown RBP11.49□□□□□ -0.57
LYSMD2-201ENST00000267838 CHKB-CPT1BH3BT56 60 aa11.49□□□□□ -0.57
LYSMD2-201ENST00000267838 KRTAP16-1A8MUX0 517 aa11.47□□□□□ -0.57
LYSMD2-201ENST00000267838 KRTAP13-3Q3SY46 172 aa11.47□□□□□ -0.57
LYSMD2-201ENST00000267838 TNXBP22105 4242 aa11.47□□□□□ -0.57
LYSMD2-201ENST00000267838 KRTAP4-5Q9BYR2 181 aa11.46□□□□□ -0.58
LYSMD2-201ENST00000267838 LINC01558Q9Y6Z2 57 aa11.45□□□□□ -0.58
LYSMD2-201ENST00000267838 RETNLBQ9BQ08 111 aa11.44□□□□□ -0.58
LYSMD2-201ENST00000267838 FAT3Q8TDW7 4589 aa11.44□□□□□ -0.58
LYSMD2-201ENST00000267838 FLG2Q5D862 2391 aaPredicted RBP11.44□□□□□ -0.58
LYSMD2-201ENST00000267838 HERC2O95714 4834 aa11.44□□□□□ -0.58
LYSMD2-201ENST00000267838 HRES1P13985 223 aa11.44□□□□□ -0.58
LYSMD2-201ENST00000267838 Q5W150 140 aa11.41□□□□□ -0.58
LYSMD2-201ENST00000267838 MT1HL1P0DM35 61 aa11.39□□□□□ -0.59
LYSMD2-201ENST00000267838 A6NED7 52 aa11.34□□□□□ -0.59
LYSMD2-201ENST00000267838 MYCBP2O75592 4640 aa11.34□□□□□ -0.59
LYSMD2-201ENST00000267838 ACYP2P14621 99 aa11.33□□□□□ -0.59
LYSMD2-201ENST00000267838 ABCA13Q86UQ4 5058 aa11.32□□□□□ -0.6
LYSMD2-201ENST00000267838 C9orf92A6NGG3 77 aa11.32□□□□□ -0.6
LYSMD2-201ENST00000267838 PMAIP1Q13794 54 aa11.29□□□□□ -0.6
LYSMD2-201ENST00000267838 CDC42SE1Q9NRR8 79 aa11.28□□□□□ -0.6
LYSMD2-201ENST00000267838 ATP11AUNQ6ZP68 121 aa11.27□□□□□ -0.61
LYSMD2-201ENST00000267838 DMAC1Q96GE9 116 aa11.27□□□□□ -0.61
LYSMD2-201ENST00000267838 IGKV2-30P06310 120 aa11.25□□□□□ -0.61
LYSMD2-201ENST00000267838 A8MU10 97 aa11.24□□□□□ -0.61
LYSMD2-201ENST00000267838 LCA10Q71F78 164 aa11.24□□□□□ -0.61
LYSMD2-201ENST00000267838 DMBT1Q9UGM3 2413 aaPredicted RBP11.23□□□□□ -0.61
LYSMD2-201ENST00000267838 C20orf166-AS1Q96NR2 134 aa11.21□□□□□ -0.61
LYSMD2-201ENST00000267838 A8MUU9 505 aa11.21□□□□□ -0.62
LYSMD2-201ENST00000267838 SPTSSBQ8NFR3 76 aa11.17□□□□□ -0.62
LYSMD2-201ENST00000267838 SPINK7P58062 85 aa11.11□□□□□ -0.63
LYSMD2-201ENST00000267838 IGKV2D-30A0A075B6S6 120 aa11.07□□□□□ -0.64
LYSMD2-201ENST00000267838 KTN1-AS1Q86SY8 53 aa11.06□□□□□ -0.64
LYSMD2-201ENST00000267838 A6NN06 94 aa11.05□□□□□ -0.64
LYSMD2-201ENST00000267838 PCLOQ9Y6V0 5065 aa11.02□□□□□ -0.65
LYSMD2-201ENST00000267838 J3QL48 77 aa11.01□□□□□ -0.65
LYSMD2-201ENST00000267838 XP32Q5T750 250 aa11.01□□□□□ -0.65
LYSMD2-201ENST00000267838 A0A1B0GU69 56 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms