RNA–Protein interactions for RNA: ENST00000265140.9

SLF1-201, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLF1, Length 5,905 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-201ENST00000265140 C20orf166-AS1Q96NR2 134 aa4.22□□□□□ -1.73
SLF1-201ENST00000265140 CYSTM1Q9H1C7 97 aa4.2□□□□□ -1.74
SLF1-201ENST00000265140 SPRR1AP35321 89 aa4.19□□□□□ -1.74
SLF1-201ENST00000265140 SEC61BP60468 96 aaKnown RBP4.19□□□□□ -1.74
SLF1-201ENST00000265140 FP248Q71RG6 208 aaPredicted RBP4.19□□□□□ -1.74
SLF1-201ENST00000265140 SRRM2Q9UQ35 2752 aaKnown RBP4.18□□□□□ -1.74
SLF1-201ENST00000265140 Q5VV11 94 aa4.18□□□□□ -1.74
SLF1-201ENST00000265140 FAM229BQ4G0N7 80 aa4.17□□□□□ -1.74
SLF1-201ENST00000265140 FBN1P35555 2871 aaKnown RBP4.17□□□□□ -1.74
SLF1-201ENST00000265140 RELNP78509 3460 aa4.16□□□□□ -1.74
SLF1-201ENST00000265140 KRTAP26-1Q6PEX3 210 aa4.15□□□□□ -1.74
SLF1-201ENST00000265140 Q5W150 140 aa4.15□□□□□ -1.75
SLF1-201ENST00000265140 Q5XG85 94 aa4.14□□□□□ -1.75
SLF1-201ENST00000265140 ASB16-AS1Q495Z4 193 aa4.13□□□□□ -1.75
SLF1-201ENST00000265140 VWFP04275 2813 aa4.13□□□□□ -1.75
SLF1-201ENST00000265140 TGP01266 2768 aa4.13□□□□□ -1.75
SLF1-201ENST00000265140 MMP24-AS1A0A0U1RRL7 71 aa4.13□□□□□ -1.75
SLF1-201ENST00000265140 ADM2Q7Z4H4 148 aa4.13□□□□□ -1.75
SLF1-201ENST00000265140 Q5VSD8 79 aa4.13□□□□□ -1.75
SLF1-201ENST00000265140 WDFY3Q8IZQ1 3526 aa4.12□□□□□ -1.75
SLF1-201ENST00000265140 SPATA8Q6RVD6 105 aa4.11□□□□□ -1.75
SLF1-201ENST00000265140 TENM2Q9NT68 2774 aa4.11□□□□□ -1.75
SLF1-201ENST00000265140 SPRR1BP22528 89 aa4.11□□□□□ -1.75
SLF1-201ENST00000265140 KRTAP1-5Q9BYS1 174 aa4.1□□□□□ -1.75
SLF1-201ENST00000265140 LINC00472Q9H8W2 130 aa4.09□□□□□ -1.75
SLF1-201ENST00000265140 OXTP01178 125 aa4.09□□□□□ -1.76
SLF1-201ENST00000265140 KRTAP4-16G5E9R7 235 aaPredicted RBP4.08□□□□□ -1.76
SLF1-201ENST00000265140 OTOGQ6ZRI0 2925 aa4.07□□□□□ -1.76
SLF1-201ENST00000265140 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
SLF1-201ENST00000265140 ASPMQ8IZT6 3477 aa4.05□□□□□ -1.76
SLF1-201ENST00000265140 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
SLF1-201ENST00000265140 LAMA5O15230 3695 aa4.04□□□□□ -1.76
SLF1-201ENST00000265140 DMDP11532 3685 aa4.04□□□□□ -1.76
SLF1-201ENST00000265140 C10orf95Q9H7T3 257 aa4.03□□□□□ -1.76
SLF1-201ENST00000265140 PLAC8Q9NZF1 115 aa4.02□□□□□ -1.77
SLF1-201ENST00000265140 KRTAP29-1A8MX34 341 aaPredicted RBP4□□□□□ -1.77
SLF1-201ENST00000265140 PANO1I0J062 215 aa4□□□□□ -1.77
SLF1-201ENST00000265140 CUBNO60494 3623 aa3.98□□□□□ -1.77
SLF1-201ENST00000265140 TNP1P09430 55 aa3.97□□□□□ -1.77
SLF1-201ENST00000265140 Q6ZR54 194 aa3.97□□□□□ -1.77
SLF1-201ENST00000265140 KRTAP7-1Q8IUC3 87 aa3.96□□□□□ -1.78
SLF1-201ENST00000265140 A8MUU9 505 aa3.96□□□□□ -1.78
SLF1-201ENST00000265140 P0C880 135 aa3.96□□□□□ -1.78
SLF1-201ENST00000265140 ZFHX4Q86UP3 3567 aa3.95□□□□□ -1.78
SLF1-201ENST00000265140 BSNQ9UPA5 3926 aa3.94□□□□□ -1.78
SLF1-201ENST00000265140 KRTAP11-1Q8IUC1 163 aa3.93□□□□□ -1.78
SLF1-201ENST00000265140 A8MU10 97 aa3.93□□□□□ -1.78
SLF1-201ENST00000265140 LCE6AA0A183 80 aa3.92□□□□□ -1.78
SLF1-201ENST00000265140 A6NN06 94 aa3.91□□□□□ -1.78
SLF1-201ENST00000265140 SPENQ96T58 3664 aaKnown RBP3.9□□□□□ -1.78
SLF1-201ENST00000265140 A0A087X002 238 aa3.9□□□□□ -1.79
SLF1-201ENST00000265140 NOTCH2NLQ7Z3S9 236 aa3.9□□□□□ -1.79
SLF1-201ENST00000265140 PP632Q6XCG6 107 aa3.89□□□□□ -1.79
SLF1-201ENST00000265140 KRTAP10-2P60368 255 aa3.89□□□□□ -1.79
SLF1-201ENST00000265140 Q6ZRN7 208 aaPredicted RBP3.89□□□□□ -1.79
SLF1-201ENST00000265140 FBN3Q75N90 2809 aa3.88□□□□□ -1.79
SLF1-201ENST00000265140 ZFHX3Q15911 3703 aa3.88□□□□□ -1.79
SLF1-201ENST00000265140 KRTAP10-1P60331 282 aa3.88□□□□□ -1.79
SLF1-201ENST00000265140 COL7A1Q02388 2944 aa3.86□□□□□ -1.79
SLF1-201ENST00000265140 KRTAP13-1Q8IUC0 172 aa3.85□□□□□ -1.79
SLF1-201ENST00000265140 CSMD1Q96PZ7 3565 aa3.84□□□□□ -1.8
SLF1-201ENST00000265140 SMG1Q96Q15 3661 aaKnown RBP3.82□□□□□ -1.8
SLF1-201ENST00000265140 SVEP1Q4LDE5 3571 aa3.81□□□□□ -1.8
SLF1-201ENST00000265140 KRTAP10-8P60410 259 aa3.79□□□□□ -1.8
SLF1-201ENST00000265140 KRTAP13-2Q52LG2 175 aa3.77□□□□□ -1.81
SLF1-201ENST00000265140 MEGF8Q7Z7M0 2845 aa3.76□□□□□ -1.81
SLF1-201ENST00000265140 RPS29P62273 56 aaKnown RBP3.76□□□□□ -1.81
SLF1-201ENST00000265140 CSMD2Q7Z408 3487 aa3.74□□□□□ -1.81
SLF1-201ENST00000265140 PRO2289Q9P1D8 64 aa3.69□□□□□ -1.82
SLF1-201ENST00000265140 ANK3Q12955 4377 aaKnown RBP3.69□□□□□ -1.82
SLF1-201ENST00000265140 KRTAP1-4P0C5Y4 121 aa3.64□□□□□ -1.83
SLF1-201ENST00000265140 NBPF19A0A087WUL8 3843 aa3.64□□□□□ -1.83
SLF1-201ENST00000265140 A0A1B0GVY2 172 aa3.63□□□□□ -1.83
SLF1-201ENST00000265140 TRRAPQ9Y4A5 3859 aa3.61□□□□□ -1.83
SLF1-201ENST00000265140 AKAP9Q99996 3911 aa3.6□□□□□ -1.83
SLF1-201ENST00000265140 KRTAP10-10P60014 251 aa3.59□□□□□ -1.84
SLF1-201ENST00000265140 VPS13CQ709C8 3753 aa3.57□□□□□ -1.84
SLF1-201ENST00000265140 KRTAP13-3Q3SY46 172 aa3.54□□□□□ -1.84
SLF1-201ENST00000265140 KRTAP21-3Q3LHN1 58 aa3.54□□□□□ -1.84
SLF1-201ENST00000265140 H0YAA0 97 aa3.52□□□□□ -1.85
SLF1-201ENST00000265140 KRTAP12-2P59991 146 aa3.49□□□□□ -1.85
SLF1-201ENST00000265140 XP32Q5T750 250 aa3.48□□□□□ -1.85
SLF1-201ENST00000265140 ZNF469Q96JG9 3925 aaPredicted RBP3.47□□□□□ -1.85
SLF1-201ENST00000265140 KRTAP15-1Q3LI76 137 aa3.41□□□□□ -1.86
SLF1-201ENST00000265140 TPRXLQ17RH7 258 aa3.4□□□□□ -1.87
SLF1-201ENST00000265140 HUWE1Q7Z6Z7 4374 aaKnown RBP3.4□□□□□ -1.87
SLF1-201ENST00000265140 DNAH3Q8TD57 4116 aa3.38□□□□□ -1.87
SLF1-201ENST00000265140 INE1O15225 51 aa3.38□□□□□ -1.87
SLF1-201ENST00000265140 KRTAP13-4Q3LI77 160 aa3.37□□□□□ -1.87
SLF1-201ENST00000265140 CMYA5Q8N3K9 4069 aa3.36□□□□□ -1.87
SLF1-201ENST00000265140 KRTAP3-1Q9BYR8 98 aa3.35□□□□□ -1.87
SLF1-201ENST00000265140 DNAH1Q9P2D7 4330 aa3.32□□□□□ -1.88
SLF1-201ENST00000265140 ANK2Q01484 3957 aa3.31□□□□□ -1.88
SLF1-201ENST00000265140 CSMD3Q7Z407 3707 aa3.3□□□□□ -1.88
SLF1-201ENST00000265140 DYNC2H1Q8NCM8 4307 aaKnown RBP3.29□□□□□ -1.88
SLF1-201ENST00000265140 DNAH9Q9NYC9 4486 aa3.29□□□□□ -1.88
SLF1-201ENST00000265140 ALMS1Q8TCU4 4167 aa3.27□□□□□ -1.89
SLF1-201ENST00000265140 CRCT1Q9UGL9 99 aa3.27□□□□□ -1.89
SLF1-201ENST00000265140 KRTAP10-6P60371 365 aaPredicted RBP3.25□□□□□ -1.89
SLF1-201ENST00000265140 KRTAP12-1P59990 96 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms