RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 SEC61BP60468 96 aaKnown RBP3.9□□□□□ -1.78
DEPDC1B-201ENST00000265036 K7EP34 96 aa3.9□□□□□ -1.79
DEPDC1B-201ENST00000265036 LINC00472Q9H8W2 130 aa3.89□□□□□ -1.79
DEPDC1B-201ENST00000265036 LOC110117498A0A087WWA1 95 aa3.89□□□□□ -1.79
DEPDC1B-201ENST00000265036 IGHV6-1A0A0B4J1U7 121 aa3.89□□□□□ -1.79
DEPDC1B-201ENST00000265036 NOTCH2NLQ7Z3S9 236 aa3.89□□□□□ -1.79
DEPDC1B-201ENST00000265036 RPL37P61927 97 aaKnown RBP3.88□□□□□ -1.79
DEPDC1B-201ENST00000265036 PRO0461Q9UI25 63 aa3.88□□□□□ -1.79
DEPDC1B-201ENST00000265036 C5orf47Q569G3 176 aa3.86□□□□□ -1.79
DEPDC1B-201ENST00000265036 PDE6GP18545 87 aa3.85□□□□□ -1.79
DEPDC1B-201ENST00000265036 GTF2H5Q6ZYL4 71 aa3.85□□□□□ -1.79
DEPDC1B-201ENST00000265036 LINC00313P59037 77 aa3.85□□□□□ -1.79
DEPDC1B-201ENST00000265036 A0A1B0GVX0 72 aa3.84□□□□□ -1.79
DEPDC1B-201ENST00000265036 NREPQ16612 68 aa3.84□□□□□ -1.8
DEPDC1B-201ENST00000265036 ETDBQ3ZM63 59 aa3.83□□□□□ -1.8
DEPDC1B-201ENST00000265036 Q75L30 129 aa3.83□□□□□ -1.8
DEPDC1B-201ENST00000265036 KRTAP16-1A8MUX0 517 aa3.83□□□□□ -1.8
DEPDC1B-201ENST00000265036 IGKV3D-7A0A0C4DH55 119 aa3.82□□□□□ -1.8
DEPDC1B-201ENST00000265036 ATP11AUNQ6ZP68 121 aa3.82□□□□□ -1.8
DEPDC1B-201ENST00000265036 A0A0U1RQV1 116 aa3.82□□□□□ -1.8
DEPDC1B-201ENST00000265036 Q8N9L7 120 aa3.82□□□□□ -1.8
DEPDC1B-201ENST00000265036 C20orf166-AS1Q96NR2 134 aa3.82□□□□□ -1.8
DEPDC1B-201ENST00000265036 ANAPC13Q9BS18 74 aa3.82□□□□□ -1.8
DEPDC1B-201ENST00000265036 A8MUU9 505 aa3.81□□□□□ -1.8
DEPDC1B-201ENST00000265036 CCDC179H3BU77 68 aa3.81□□□□□ -1.8
DEPDC1B-201ENST00000265036 MT-ATP8P03928 68 aa3.81□□□□□ -1.8
DEPDC1B-201ENST00000265036 KRTAP9-8Q9BYQ0 159 aa3.81□□□□□ -1.8
DEPDC1B-201ENST00000265036 A8MWP4 228 aa3.81□□□□□ -1.8
DEPDC1B-201ENST00000265036 J3KT08 172 aa3.81□□□□□ -1.8
DEPDC1B-201ENST00000265036 K7EQZ3 153 aa3.81□□□□□ -1.8
DEPDC1B-201ENST00000265036 NDUFB1O75438 58 aa3.81□□□□□ -1.8
DEPDC1B-201ENST00000265036 Q6ZVQ6 151 aa3.8□□□□□ -1.8
DEPDC1B-201ENST00000265036 LINC00846Q9NV44 126 aa3.8□□□□□ -1.8
DEPDC1B-201ENST00000265036 A0A1B0GW54 56 aa3.8□□□□□ -1.8
DEPDC1B-201ENST00000265036 F8W1H4 67 aa3.79□□□□□ -1.8
DEPDC1B-201ENST00000265036 LCE2BO14633 110 aa3.79□□□□□ -1.8
DEPDC1B-201ENST00000265036 BPY2O14599 106 aa3.79□□□□□ -1.8
DEPDC1B-201ENST00000265036 C8orf17Q9NRJ1 99 aa3.79□□□□□ -1.8
DEPDC1B-201ENST00000265036 C8orf87E5RJ46 101 aa3.78□□□□□ -1.8
DEPDC1B-201ENST00000265036 PRR15Q8IV56 129 aa3.78□□□□□ -1.8
DEPDC1B-201ENST00000265036 KRTAP19-2Q3LHN2 52 aa3.77□□□□□ -1.81
DEPDC1B-201ENST00000265036 MMP24-AS1A0A0U1RRL7 71 aa3.77□□□□□ -1.81
DEPDC1B-201ENST00000265036 LCE2AQ5TA79 106 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1B-201ENST00000265036 LCE2CQ5TA81 110 aa3.76□□□□□ -1.81
DEPDC1B-201ENST00000265036 COX6B2Q6YFQ2 88 aa3.76□□□□□ -1.81
DEPDC1B-201ENST00000265036 WFDC13Q8IUB5 93 aa3.76□□□□□ -1.81
DEPDC1B-201ENST00000265036 UBL5Q9BZL1 73 aa3.76□□□□□ -1.81
DEPDC1B-201ENST00000265036 J3QR89 54 aa3.76□□□□□ -1.81
DEPDC1B-201ENST00000265036 FLGP20930 4061 aaPredicted RBP3.75□□□□□ -1.81
DEPDC1B-201ENST00000265036 KRTAP4-8Q9BYQ9 185 aa3.75□□□□□ -1.81
DEPDC1B-201ENST00000265036 NDUFS5O43920 106 aa3.75□□□□□ -1.81
DEPDC1B-201ENST00000265036 KRTAP5-3Q6L8H2 238 aa3.74□□□□□ -1.81
DEPDC1B-201ENST00000265036 hDV103S1A0JD37 113 aa3.73□□□□□ -1.81
DEPDC1B-201ENST00000265036 SEC61GP60059 68 aa3.73□□□□□ -1.81
DEPDC1B-201ENST00000265036 Q8N9P0 234 aaPredicted RBP3.72□□□□□ -1.81
DEPDC1B-201ENST00000265036 ZCCHC13Q8WW36 166 aaKnown RBP3.72□□□□□ -1.81
DEPDC1B-201ENST00000265036 MRPL34Q9BQ48 92 aaKnown RBP3.72□□□□□ -1.81
DEPDC1B-201ENST00000265036 MT1HP80294 61 aa3.71□□□□□ -1.81
DEPDC1B-201ENST00000265036 TMEM254Q8TBM7 123 aa3.71□□□□□ -1.81
DEPDC1B-201ENST00000265036 CASC2Q6XLA1 102 aa3.71□□□□□ -1.82
DEPDC1B-201ENST00000265036 M0R2T5 61 aa3.69□□□□□ -1.82
DEPDC1B-201ENST00000265036 HCG22E2RYF7 251 aa3.69□□□□□ -1.82
DEPDC1B-201ENST00000265036 FAM236DA0A1B0GTK5 79 aa3.68□□□□□ -1.82
DEPDC1B-201ENST00000265036 FAM236CP0DP71 79 aa3.68□□□□□ -1.82
DEPDC1B-201ENST00000265036 SPINK7P58062 85 aa3.68□□□□□ -1.82
DEPDC1B-201ENST00000265036 C4orf26Q17RF5 130 aa3.68□□□□□ -1.82
DEPDC1B-201ENST00000265036 HRES1P13985 223 aa3.68□□□□□ -1.82
DEPDC1B-201ENST00000265036 Q5W150 140 aa3.67□□□□□ -1.82
DEPDC1B-201ENST00000265036 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.67□□□□□ -1.82
DEPDC1B-201ENST00000265036 IGKV2D-30A0A075B6S6 120 aa3.66□□□□□ -1.82
DEPDC1B-201ENST00000265036 IGKV2-30P06310 120 aa3.66□□□□□ -1.82
DEPDC1B-201ENST00000265036 FAM240AA0A1B0GVK7 77 aa3.66□□□□□ -1.82
DEPDC1B-201ENST00000265036 CXCL6P80162 114 aa3.66□□□□□ -1.82
DEPDC1B-201ENST00000265036 FSIP2Q5CZC0 6907 aa3.66□□□□□ -1.82
DEPDC1B-201ENST00000265036 HIST1H4AP62805 103 aaKnown RBP3.65□□□□□ -1.82
DEPDC1B-201ENST00000265036 ACYP1P07311 99 aa3.65□□□□□ -1.83
DEPDC1B-201ENST00000265036 KRTAP9-2Q9BYQ4 174 aa3.65□□□□□ -1.83
DEPDC1B-201ENST00000265036 KRTAP4-8A0A0G2JLE6 195 aa3.64□□□□□ -1.83
DEPDC1B-201ENST00000265036 KRTAP9-6A0A140TA67 174 aa3.64□□□□□ -1.83
DEPDC1B-201ENST00000265036 FAM236AA0A1B0GUQ0 79 aa3.64□□□□□ -1.83
DEPDC1B-201ENST00000265036 FAM236BA0A1B0GV22 79 aa3.64□□□□□ -1.83
DEPDC1B-201ENST00000265036 RBM12B-AS1Q9P1G2 102 aa3.64□□□□□ -1.83
DEPDC1B-201ENST00000265036 A0A087WVE0 104 aa3.64□□□□□ -1.83
DEPDC1B-201ENST00000265036 MPLKIPQ8TAP9 179 aa3.63□□□□□ -1.83
DEPDC1B-201ENST00000265036 V9GYY9 64 aa3.63□□□□□ -1.83
DEPDC1B-201ENST00000265036 KRTAP10-6P60371 365 aaPredicted RBP3.62□□□□□ -1.83
DEPDC1B-201ENST00000265036 PRO0628Q9UI54 55 aa3.61□□□□□ -1.83
DEPDC1B-201ENST00000265036 ATP5EP2Q5VTU8 51 aa3.61□□□□□ -1.83
DEPDC1B-201ENST00000265036 C7orf65Q6ZTY9 151 aa3.61□□□□□ -1.83
DEPDC1B-201ENST00000265036 LORP23490 312 aaPredicted RBP3.6□□□□□ -1.83
DEPDC1B-201ENST00000265036 RPS28P62857 69 aaKnown RBP3.6□□□□□ -1.83
DEPDC1B-201ENST00000265036 LINC00643Q86TS7 51 aa3.6□□□□□ -1.83
DEPDC1B-201ENST00000265036 KRTAP4-7Q9BYR0 210 aa3.59□□□□□ -1.83
DEPDC1B-201ENST00000265036 CYSTM1Q9H1C7 97 aa3.59□□□□□ -1.83
DEPDC1B-201ENST00000265036 TP53AIP1Q9HCN2 124 aa3.55□□□□□ -1.84
DEPDC1B-201ENST00000265036 TRAV22A0A0B4J277 110 aa3.55□□□□□ -1.84
DEPDC1B-201ENST00000265036 UQCRQO14949 82 aa3.55□□□□□ -1.84
DEPDC1B-201ENST00000265036 H0Y9P7 68 aa3.52□□□□□ -1.85
DEPDC1B-201ENST00000265036 LCE3BQ5TA77 95 aa3.52□□□□□ -1.85
DEPDC1B-201ENST00000265036 COX7CP15954 63 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms