RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PLA2G1BP04054 148 aaKnown RBP7.31□□□□□ -1.24
CHMP2B-201ENST00000263780 CMYA5Q8N3K9 4069 aa7.3□□□□□ -1.24
CHMP2B-201ENST00000263780 SPINK6Q6UWN8 80 aa7.3□□□□□ -1.24
CHMP2B-201ENST00000263780 PSORS1C2Q9UIG4 136 aa7.3□□□□□ -1.24
CHMP2B-201ENST00000263780 Q6ZRN7 208 aaPredicted RBP7.29□□□□□ -1.24
CHMP2B-201ENST00000263780 FAM229AH3BQW9 127 aa7.29□□□□□ -1.24
CHMP2B-201ENST00000263780 SPATA8Q6RVD6 105 aa7.29□□□□□ -1.24
CHMP2B-201ENST00000263780 ANAPC11Q9NYG5 84 aa7.26□□□□□ -1.25
CHMP2B-201ENST00000263780 UQCR11O14957 56 aa7.24□□□□□ -1.25
CHMP2B-201ENST00000263780 SSBP3-AS1Q7Z2R9 100 aa7.24□□□□□ -1.25
CHMP2B-201ENST00000263780 DNAH9Q9NYC9 4486 aa7.23□□□□□ -1.25
CHMP2B-201ENST00000263780 MIR22HGQ0VDD5 57 aa7.23□□□□□ -1.25
CHMP2B-201ENST00000263780 ALMS1Q8TCU4 4167 aa7.22□□□□□ -1.25
CHMP2B-201ENST00000263780 IGKV2-30P06310 120 aa7.22□□□□□ -1.25
CHMP2B-201ENST00000263780 CIRBP-AS1Q8TBR5 109 aa7.22□□□□□ -1.25
CHMP2B-201ENST00000263780 A0A087WTM6 91 aa7.22□□□□□ -1.25
CHMP2B-201ENST00000263780 NOTCH1P46531 2555 aa7.22□□□□□ -1.25
CHMP2B-201ENST00000263780 NUPR2A6NF83 97 aa7.21□□□□□ -1.25
CHMP2B-201ENST00000263780 PRAC1Q96KF2 57 aa7.21□□□□□ -1.25
CHMP2B-201ENST00000263780 RTL8CO15255 209 aa7.2□□□□□ -1.26
CHMP2B-201ENST00000263780 STAB1Q9NY15 2570 aa7.2□□□□□ -1.26
CHMP2B-201ENST00000263780 NBEAL1Q6ZS30 2694 aa7.19□□□□□ -1.26
CHMP2B-201ENST00000263780 LINC01554Q52M75 96 aa7.19□□□□□ -1.26
CHMP2B-201ENST00000263780 IGLV7-43P04211 117 aa7.18□□□□□ -1.26
CHMP2B-201ENST00000263780 LYSTQ99698 3801 aa7.16□□□□□ -1.26
CHMP2B-201ENST00000263780 FBN1P35555 2871 aaKnown RBP7.16□□□□□ -1.26
CHMP2B-201ENST00000263780 COL6A5A8TX70 2615 aa7.15□□□□□ -1.27
CHMP2B-201ENST00000263780 ADM2Q7Z4H4 148 aa7.14□□□□□ -1.27
CHMP2B-201ENST00000263780 DYNC2H1Q8NCM8 4307 aaKnown RBP7.14□□□□□ -1.27
CHMP2B-201ENST00000263780 RETNLBQ9BQ08 111 aa7.13□□□□□ -1.27
CHMP2B-201ENST00000263780 DNAH8Q96JB1 4490 aa7.09□□□□□ -1.27
CHMP2B-201ENST00000263780 STAB2Q8WWQ8 2551 aa7.09□□□□□ -1.27
CHMP2B-201ENST00000263780 IGKV2D-30A0A075B6S6 120 aa7.08□□□□□ -1.28
CHMP2B-201ENST00000263780 C4orf48Q5BLP8 95 aa7.07□□□□□ -1.28
CHMP2B-201ENST00000263780 KRTAP16-1A8MUX0 517 aa7.06□□□□□ -1.28
CHMP2B-201ENST00000263780 COL7A1Q02388 2944 aa7.06□□□□□ -1.28
CHMP2B-201ENST00000263780 CSAG1Q6PB30 78 aa7.02□□□□□ -1.29
CHMP2B-201ENST00000263780 CSMD3Q7Z407 3707 aa7.01□□□□□ -1.29
CHMP2B-201ENST00000263780 PLECQ15149 4684 aaKnown RBP7□□□□□ -1.29
CHMP2B-201ENST00000263780 C1orf134Q5TEV5 83 aa6.99□□□□□ -1.29
CHMP2B-201ENST00000263780 VPS13DQ5THJ4 4388 aa6.98□□□□□ -1.29
CHMP2B-201ENST00000263780 KRTAP13-2Q52LG2 175 aa6.98□□□□□ -1.29
CHMP2B-201ENST00000263780 DNAH17Q9UFH2 4485 aa6.97□□□□□ -1.29
CHMP2B-201ENST00000263780 MGAM2Q2M2H8 2515 aa6.96□□□□□ -1.29
CHMP2B-201ENST00000263780 DNAH7Q8WXX0 4024 aa6.96□□□□□ -1.29
CHMP2B-201ENST00000263780 LY6G6CO95867 125 aa6.96□□□□□ -1.29
CHMP2B-201ENST00000263780 FRAS1Q86XX4 4008 aa6.95□□□□□ -1.3
CHMP2B-201ENST00000263780 HECTD4Q9Y4D8 3996 aa6.94□□□□□ -1.3
CHMP2B-201ENST00000263780 SPINK1P00995 79 aa6.94□□□□□ -1.3
CHMP2B-201ENST00000263780 Q8N1X5 172 aa6.88□□□□□ -1.31
CHMP2B-201ENST00000263780 H3BS24 57 aa6.88□□□□□ -1.31
CHMP2B-201ENST00000263780 A8MUU9 505 aa6.87□□□□□ -1.31
CHMP2B-201ENST00000263780 Q6ZSA8 131 aa6.86□□□□□ -1.31
CHMP2B-201ENST00000263780 KRTAP1-4P0C5Y4 121 aa6.84□□□□□ -1.31
CHMP2B-201ENST00000263780 KRTAP25-1Q3LHN0 102 aa6.84□□□□□ -1.31
CHMP2B-201ENST00000263780 A0A1B0GU33 70 aa6.84□□□□□ -1.31
CHMP2B-201ENST00000263780 H0YAA0 97 aa6.84□□□□□ -1.31
CHMP2B-201ENST00000263780 TYMSOSQ8TAI1 123 aa6.84□□□□□ -1.31
CHMP2B-201ENST00000263780 DNAH2Q9P225 4427 aa6.81□□□□□ -1.32
CHMP2B-201ENST00000263780 LINC00304Q8N9R0 145 aa6.8□□□□□ -1.32
CHMP2B-201ENST00000263780 KRTAP10-2P60368 255 aa6.8□□□□□ -1.32
CHMP2B-201ENST00000263780 RPS29P62273 56 aaKnown RBP6.8□□□□□ -1.32
CHMP2B-201ENST00000263780 K7ERS5 55 aa6.79□□□□□ -1.32
CHMP2B-201ENST00000263780 H1FX-AS1Q4G0G2 97 aa6.79□□□□□ -1.32
CHMP2B-201ENST00000263780 PRKDCP78527 4128 aaKnown RBP6.79□□□□□ -1.32
CHMP2B-201ENST00000263780 STARD9Q9P2P6 4700 aa6.79□□□□□ -1.32
CHMP2B-201ENST00000263780 TGP01266 2768 aa6.78□□□□□ -1.32
CHMP2B-201ENST00000263780 DNAH11Q96DT5 4516 aa6.77□□□□□ -1.33
CHMP2B-201ENST00000263780 MEGF8Q7Z7M0 2845 aa6.75□□□□□ -1.33
CHMP2B-201ENST00000263780 KRTAP10-1P60331 282 aa6.74□□□□□ -1.33
CHMP2B-201ENST00000263780 ROMO1P60602 79 aa6.72□□□□□ -1.33
CHMP2B-201ENST00000263780 FBN3Q75N90 2809 aa6.72□□□□□ -1.33
CHMP2B-201ENST00000263780 KMT2AQ03164 3969 aa6.71□□□□□ -1.33
CHMP2B-201ENST00000263780 C20orf166-AS1Q96NR2 134 aa6.71□□□□□ -1.34
CHMP2B-201ENST00000263780 KRTAP3-1Q9BYR8 98 aa6.67□□□□□ -1.34
CHMP2B-201ENST00000263780 DNAH5Q8TE73 4624 aa6.67□□□□□ -1.34
CHMP2B-201ENST00000263780 LRP1BQ9NZR2 4599 aa6.64□□□□□ -1.35
CHMP2B-201ENST00000263780 DNAH6Q9C0G6 4158 aa6.64□□□□□ -1.35
CHMP2B-201ENST00000263780 COX6B2Q6YFQ2 88 aa6.62□□□□□ -1.35
CHMP2B-201ENST00000263780 C9orf92A6NGG3 77 aa6.61□□□□□ -1.35
CHMP2B-201ENST00000263780 RPL37P61927 97 aaKnown RBP6.55□□□□□ -1.36
CHMP2B-201ENST00000263780 VPS13BQ7Z7G8 4022 aa6.54□□□□□ -1.36
CHMP2B-201ENST00000263780 DNHD1Q96M86 4753 aa6.54□□□□□ -1.36
CHMP2B-201ENST00000263780 CRIPTQ9P021 101 aa6.53□□□□□ -1.36
CHMP2B-201ENST00000263780 PKD1P98161 4303 aa6.5□□□□□ -1.37
CHMP2B-201ENST00000263780 SACSQ9NZJ4 4579 aa6.5□□□□□ -1.37
CHMP2B-201ENST00000263780 P0C880 135 aa6.46□□□□□ -1.38
CHMP2B-201ENST00000263780 FLG2Q5D862 2391 aaPredicted RBP6.46□□□□□ -1.38
CHMP2B-201ENST00000263780 KRTAP10-6P60371 365 aaPredicted RBP6.44□□□□□ -1.38
CHMP2B-201ENST00000263780 SPINT4Q6UDR6 99 aa6.44□□□□□ -1.38
CHMP2B-201ENST00000263780 FAT2Q9NYQ8 4349 aa6.44□□□□□ -1.38
CHMP2B-201ENST00000263780 A0A0D9SG42 100 aa6.4□□□□□ -1.39
CHMP2B-201ENST00000263780 TPRXLQ17RH7 258 aa6.38□□□□□ -1.39
CHMP2B-201ENST00000263780 KRTAP3-3Q9BYR6 98 aa6.38□□□□□ -1.39
CHMP2B-201ENST00000263780 SMR3BP02814 79 aaPredicted RBP6.37□□□□□ -1.39
CHMP2B-201ENST00000263780 KRTAP13-4Q3LI77 160 aa6.37□□□□□ -1.39
CHMP2B-201ENST00000263780 PKHD1L1Q86WI1 4243 aa6.36□□□□□ -1.39
CHMP2B-201ENST00000263780 KRTAP3-2Q9BYR7 98 aa6.36□□□□□ -1.39
CHMP2B-201ENST00000263780 S4R3F8 94 aa6.36□□□□□ -1.39
CHMP2B-201ENST00000263780 KRTAP10-4P60372 401 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms