RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 C6orf99Q4VX62 202 aa4.72□□□□□ -1.65
LCN1-201ENST00000263598 SMIM29Q86T20 159 aa4.72□□□□□ -1.65
LCN1-201ENST00000263598 TMEM256-PLSCR3K7ERE1 68 aa4.71□□□□□ -1.66
LCN1-201ENST00000263598 SMIM11BQ8TCY0 68 aa4.71□□□□□ -1.66
LCN1-201ENST00000263598 ORMDL1Q9P0S3 153 aa4.71□□□□□ -1.66
LCN1-201ENST00000263598 PDE6GP18545 87 aa4.7□□□□□ -1.66
LCN1-201ENST00000263598 FLGP20930 4061 aaPredicted RBP4.7□□□□□ -1.66
LCN1-201ENST00000263598 TRBV7-6A0A0J9YX20 115 aa4.69□□□□□ -1.66
LCN1-201ENST00000263598 FAM236AA0A1B0GUQ0 79 aa4.69□□□□□ -1.66
LCN1-201ENST00000263598 FAM236BA0A1B0GV22 79 aa4.69□□□□□ -1.66
LCN1-201ENST00000263598 COX7CP15954 63 aa4.69□□□□□ -1.66
LCN1-201ENST00000263598 RPS28P62857 69 aaKnown RBP4.69□□□□□ -1.66
LCN1-201ENST00000263598 FAM218AQ96MZ4 157 aa4.69□□□□□ -1.66
LCN1-201ENST00000263598 IGLV5-48A0A075B6I7 105 aa4.68□□□□□ -1.66
LCN1-201ENST00000263598 A0A0G2JQZ4 141 aa4.68□□□□□ -1.66
LCN1-201ENST00000263598 CCDC179H3BU77 68 aa4.68□□□□□ -1.66
LCN1-201ENST00000263598 CCKP06307 115 aa4.68□□□□□ -1.66
LCN1-201ENST00000263598 ATP11AUNQ6ZP68 121 aa4.68□□□□□ -1.66
LCN1-201ENST00000263598 SMIM20Q8N5G0 67 aa4.66□□□□□ -1.66
LCN1-201ENST00000263598 SS18L2Q9UHA2 77 aa4.66□□□□□ -1.66
LCN1-201ENST00000263598 LOC110117498A0A087WWA1 95 aa4.65□□□□□ -1.67
LCN1-201ENST00000263598 hADV29S1A0JD25 119 aa4.65□□□□□ -1.67
LCN1-201ENST00000263598 F8WEM9 126 aa4.65□□□□□ -1.67
LCN1-201ENST00000263598 SERP2Q8N6R1 65 aa4.65□□□□□ -1.67
LCN1-201ENST00000263598 TMEM258P61165 79 aa4.64□□□□□ -1.67
LCN1-201ENST00000263598 Q75L30 129 aa4.64□□□□□ -1.67
LCN1-201ENST00000263598 UBL5Q9BZL1 73 aa4.63□□□□□ -1.67
LCN1-201ENST00000263598 LINC00575Q6W349 94 aa4.62□□□□□ -1.67
LCN1-201ENST00000263598 KRTAP9-8Q9BYQ0 159 aa4.62□□□□□ -1.67
LCN1-201ENST00000263598 C14orf132Q9NPU4 83 aa4.62□□□□□ -1.67
LCN1-201ENST00000263598 LINC00846Q9NV44 126 aa4.62□□□□□ -1.67
LCN1-201ENST00000263598 A0A1B0GW54 56 aa4.61□□□□□ -1.67
LCN1-201ENST00000263598 J3KT08 172 aa4.61□□□□□ -1.67
LCN1-201ENST00000263598 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.61□□□□□ -1.67
LCN1-201ENST00000263598 USH2AO75445 5202 aa4.61□□□□□ -1.67
LCN1-201ENST00000263598 CXCL6P80162 114 aa4.6□□□□□ -1.67
LCN1-201ENST00000263598 RBM3P98179 157 aaKnown RBP4.6□□□□□ -1.67
LCN1-201ENST00000263598 SSPOA2VEC9 5147 aa4.6□□□□□ -1.67
LCN1-201ENST00000263598 Q96NJ1 140 aa4.59□□□□□ -1.67
LCN1-201ENST00000263598 Q6ZQT0 140 aa4.58□□□□□ -1.68
LCN1-201ENST00000263598 DSCR8Q96T75 97 aa4.58□□□□□ -1.68
LCN1-201ENST00000263598 IGFL1Q6UW32 110 aa4.57□□□□□ -1.68
LCN1-201ENST00000263598 TRAV7A0A075B6U4 112 aa4.56□□□□□ -1.68
LCN1-201ENST00000263598 NDUFC1O43677 76 aa4.56□□□□□ -1.68
LCN1-201ENST00000263598 TRBV7-4A0A0J9YYF1 115 aa4.55□□□□□ -1.68
LCN1-201ENST00000263598 ATP5EP56381 51 aaPredicted RBP4.55□□□□□ -1.68
LCN1-201ENST00000263598 Q6ZQY7 126 aa4.55□□□□□ -1.68
LCN1-201ENST00000263598 C20orf166-AS1Q96NR2 134 aa4.55□□□□□ -1.68
LCN1-201ENST00000263598 IGKV3D-7A0A0C4DH55 119 aa4.54□□□□□ -1.68
LCN1-201ENST00000263598 KLKP1Q107X0 134 aa4.54□□□□□ -1.68
LCN1-201ENST00000263598 KRTAP19-1Q8IUB9 90 aa4.54□□□□□ -1.68
LCN1-201ENST00000263598 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
LCN1-201ENST00000263598 MT2AP02795 61 aa4.53□□□□□ -1.68
LCN1-201ENST00000263598 FAM236DA0A1B0GTK5 79 aa4.52□□□□□ -1.69
LCN1-201ENST00000263598 A8MUU9 505 aa4.52□□□□□ -1.69
LCN1-201ENST00000263598 FAM236CP0DP71 79 aa4.52□□□□□ -1.69
LCN1-201ENST00000263598 Q6ZVQ6 151 aa4.52□□□□□ -1.69
LCN1-201ENST00000263598 LCE2BO14633 110 aa4.51□□□□□ -1.69
LCN1-201ENST00000263598 KRTAP10-10P60014 251 aa4.5□□□□□ -1.69
LCN1-201ENST00000263598 C5orf47Q569G3 176 aa4.5□□□□□ -1.69
LCN1-201ENST00000263598 A0A087WVE0 104 aa4.49□□□□□ -1.69
LCN1-201ENST00000263598 MT1FP04733 61 aa4.49□□□□□ -1.69
LCN1-201ENST00000263598 RBM12B-AS1Q9P1G2 102 aa4.49□□□□□ -1.69
LCN1-201ENST00000263598 SERP1Q9Y6X1 66 aa4.49□□□□□ -1.69
LCN1-201ENST00000263598 KRTAP9-3Q9BYQ3 159 aa4.48□□□□□ -1.69
LCN1-201ENST00000263598 MACF1Q9UPN3 7388 aaKnown RBP4.47□□□□□ -1.69
LCN1-201ENST00000263598 H7BZZ5 65 aa4.46□□□□□ -1.7
LCN1-201ENST00000263598 DSCR10P59022 87 aa4.46□□□□□ -1.7
LCN1-201ENST00000263598 A0A087WSZ3 146 aa4.45□□□□□ -1.7
LCN1-201ENST00000263598 NREPQ16612 68 aa4.44□□□□□ -1.7
LCN1-201ENST00000263598 C20orf197Q8N268 126 aa4.44□□□□□ -1.7
LCN1-201ENST00000263598 SYNE2Q8WXH0 6885 aaKnown RBP4.43□□□□□ -1.7
LCN1-201ENST00000263598 LINC00313P59037 77 aa4.43□□□□□ -1.7
LCN1-201ENST00000263598 SMIM26A0A096LP01 95 aa4.42□□□□□ -1.7
LCN1-201ENST00000263598 KRTAP16-1A8MUX0 517 aa4.42□□□□□ -1.7
LCN1-201ENST00000263598 HRES1P13985 223 aa4.42□□□□□ -1.7
LCN1-201ENST00000263598 MPLKIPQ8TAP9 179 aa4.42□□□□□ -1.7
LCN1-201ENST00000263598 CYSTM1Q9H1C7 97 aa4.42□□□□□ -1.7
LCN1-201ENST00000263598 BPY2O14599 106 aa4.41□□□□□ -1.7
LCN1-201ENST00000263598 IGKV4-1P06312 121 aa4.4□□□□□ -1.71
LCN1-201ENST00000263598 KRTAP19-6Q3LI70 58 aa4.4□□□□□ -1.71
LCN1-201ENST00000263598 TMEM254Q8TBM7 123 aa4.4□□□□□ -1.71
LCN1-201ENST00000263598 NOTCH2NLQ7Z3S9 236 aa4.39□□□□□ -1.71
LCN1-201ENST00000263598 OCR1Q9BZK8 76 aa4.39□□□□□ -1.71
LCN1-201ENST00000263598 A0A1W2PNM2 257 aa4.35□□□□□ -1.71
LCN1-201ENST00000263598 H3BPC8 53 aa4.35□□□□□ -1.71
LCN1-201ENST00000263598 NDUFB1O75438 58 aa4.35□□□□□ -1.71
LCN1-201ENST00000263598 IGHV6-1A0A0B4J1U7 121 aa4.34□□□□□ -1.71
LCN1-201ENST00000263598 KRTAP6-3Q3LI67 103 aa4.34□□□□□ -1.71
LCN1-201ENST00000263598 A8MWP4 228 aa4.33□□□□□ -1.72
LCN1-201ENST00000263598 DEFB116Q30KQ4 102 aa4.33□□□□□ -1.72
LCN1-201ENST00000263598 PRO0628Q9UI54 55 aa4.33□□□□□ -1.72
LCN1-201ENST00000263598 SNURFQ9Y675 71 aa4.32□□□□□ -1.72
LCN1-201ENST00000263598 C8orf87E5RJ46 101 aa4.31□□□□□ -1.72
LCN1-201ENST00000263598 SPINK7P58062 85 aa4.31□□□□□ -1.72
LCN1-201ENST00000263598 ZCCHC13Q8WW36 166 aaKnown RBP4.31□□□□□ -1.72
LCN1-201ENST00000263598 CYP4F30PQ9H0H9 118 aa4.31□□□□□ -1.72
LCN1-201ENST00000263598 LINC00472Q9H8W2 130 aa4.31□□□□□ -1.72
LCN1-201ENST00000263598 C4orf26Q17RF5 130 aa4.3□□□□□ -1.72
LCN1-201ENST00000263598 HCG22E2RYF7 251 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms