RNA–Protein interactions for RNA: ENST00000261833.11

CIT-201, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIT, Length 8,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-201ENST00000261833 Q6ZR54 194 aa6.06□□□□□ -1.44
CIT-201ENST00000261833 CELSR2Q9HCU4 2923 aa6.05□□□□□ -1.44
CIT-201ENST00000261833 CSMD2Q7Z408 3487 aa6.05□□□□□ -1.44
CIT-201ENST00000261833 SPINK7P58062 85 aa6.04□□□□□ -1.44
CIT-201ENST00000261833 KRTAP1-3Q8IUG1 177 aa6.04□□□□□ -1.44
CIT-201ENST00000261833 MXRA5Q9NR99 2828 aa6.04□□□□□ -1.44
CIT-201ENST00000261833 STAB1Q9NY15 2570 aa6□□□□□ -1.45
CIT-201ENST00000261833 SPRR1BP22528 89 aa6□□□□□ -1.45
CIT-201ENST00000261833 ZCCHC13Q8WW36 166 aaKnown RBP5.99□□□□□ -1.45
CIT-201ENST00000261833 PLAC4Q8WY50 150 aa5.99□□□□□ -1.45
CIT-201ENST00000261833 Q5W150 140 aa5.99□□□□□ -1.45
CIT-201ENST00000261833 PRAC1Q96KF2 57 aa5.98□□□□□ -1.45
CIT-201ENST00000261833 LCE6AA0A183 80 aa5.97□□□□□ -1.45
CIT-201ENST00000261833 TNP2Q05952 138 aa5.97□□□□□ -1.45
CIT-201ENST00000261833 SEC61BP60468 96 aaKnown RBP5.96□□□□□ -1.46
CIT-201ENST00000261833 HIVEP1P15822 2718 aa5.96□□□□□ -1.46
CIT-201ENST00000261833 KRTAP26-1Q6PEX3 210 aa5.94□□□□□ -1.46
CIT-201ENST00000261833 KRTAP4-16G5E9R7 235 aaPredicted RBP5.94□□□□□ -1.46
CIT-201ENST00000261833 KRTAP1-1Q07627 177 aa5.94□□□□□ -1.46
CIT-201ENST00000261833 ROMO1P60602 79 aa5.93□□□□□ -1.46
CIT-201ENST00000261833 PLAC8Q9NZF1 115 aa5.93□□□□□ -1.46
CIT-201ENST00000261833 A6NN06 94 aa5.92□□□□□ -1.46
CIT-201ENST00000261833 NIPBLQ6KC79 2804 aaeCLIP5.92□□□□□ -1.461e-5■□□□□ 11.1
CIT-201ENST00000261833 S4R3F8 94 aa5.92□□□□□ -1.46
CIT-201ENST00000261833 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.91□□□□□ -1.46
CIT-201ENST00000261833 CUBNO60494 3623 aa5.9□□□□□ -1.46
CIT-201ENST00000261833 KRTAP29-1A8MX34 341 aaPredicted RBP5.9□□□□□ -1.46
CIT-201ENST00000261833 H1FX-AS1Q4G0G2 97 aa5.89□□□□□ -1.47
CIT-201ENST00000261833 SPATA8Q6RVD6 105 aa5.89□□□□□ -1.47
CIT-201ENST00000261833 A0A087X002 238 aa5.87□□□□□ -1.47
CIT-201ENST00000261833 A0A0A0MQY5 61 aa5.86□□□□□ -1.47
CIT-201ENST00000261833 RPL37P61927 97 aaKnown RBP5.83□□□□□ -1.48
CIT-201ENST00000261833 PDZD2O15018 2839 aa5.81□□□□□ -1.48
CIT-201ENST00000261833 TRRAPQ9Y4A5 3859 aa5.79□□□□□ -1.48
CIT-201ENST00000261833 R4GN34 69 aa5.78□□□□□ -1.48
CIT-201ENST00000261833 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
CIT-201ENST00000261833 ZNF469Q96JG9 3925 aaPredicted RBP5.77□□□□□ -1.49
CIT-201ENST00000261833 TGP01266 2768 aa5.75□□□□□ -1.49
CIT-201ENST00000261833 SRRM2Q9UQ35 2752 aaKnown RBP5.74□□□□□ -1.49
CIT-201ENST00000261833 KRTAP16-1A8MUX0 517 aa5.72□□□□□ -1.49
CIT-201ENST00000261833 KRTAP1-5Q9BYS1 174 aa5.71□□□□□ -1.5
CIT-201ENST00000261833 TENM1Q9UKZ4 2725 aa5.69□□□□□ -1.5
CIT-201ENST00000261833 TENM2Q9NT68 2774 aa5.69□□□□□ -1.5
CIT-201ENST00000261833 RPS29P62273 56 aaKnown RBP5.68□□□□□ -1.5
CIT-201ENST00000261833 M0QZ58 72 aa5.67□□□□□ -1.5
CIT-201ENST00000261833 PANO1I0J062 215 aa5.67□□□□□ -1.5
CIT-201ENST00000261833 VWFP04275 2813 aa5.65□□□□□ -1.51
CIT-201ENST00000261833 CMYA5Q8N3K9 4069 aa5.63□□□□□ -1.51
CIT-201ENST00000261833 C20orf166-AS1Q96NR2 134 aa5.63□□□□□ -1.51
CIT-201ENST00000261833 FBN1P35555 2871 aaKnown RBP5.62□□□□□ -1.51
CIT-201ENST00000261833 NOTCH2NLQ7Z3S9 236 aa5.61□□□□□ -1.51
CIT-201ENST00000261833 CSMD3Q7Z407 3707 aa5.61□□□□□ -1.51
CIT-201ENST00000261833 ADM2Q7Z4H4 148 aa5.61□□□□□ -1.51
CIT-201ENST00000261833 PKD1L1Q8TDX9 2849 aa5.61□□□□□ -1.51
CIT-201ENST00000261833 ALMS1Q8TCU4 4167 aa5.6□□□□□ -1.51
CIT-201ENST00000261833 A8MU10 97 aa5.6□□□□□ -1.51
CIT-201ENST00000261833 KRTAP13-1Q8IUC0 172 aa5.58□□□□□ -1.52
CIT-201ENST00000261833 LYSTQ99698 3801 aa5.57□□□□□ -1.52
CIT-201ENST00000261833 KRTAP10-1P60331 282 aa5.55□□□□□ -1.52
CIT-201ENST00000261833 KRTAP7-1Q8IUC3 87 aa5.55□□□□□ -1.52
CIT-201ENST00000261833 KRTAP11-1Q8IUC1 163 aa5.54□□□□□ -1.52
CIT-201ENST00000261833 KRTAP10-2P60368 255 aa5.51□□□□□ -1.53
CIT-201ENST00000261833 TENM3Q9P273 2699 aa5.51□□□□□ -1.53
CIT-201ENST00000261833 NDUFAF8A1L188 74 aa5.51□□□□□ -1.53
CIT-201ENST00000261833 A8MUU9 505 aa5.5□□□□□ -1.53
CIT-201ENST00000261833 ANK2Q01484 3957 aa5.5□□□□□ -1.53
CIT-201ENST00000261833 TENM4Q6N022 2769 aa5.48□□□□□ -1.53
CIT-201ENST00000261833 Q6ZRN7 208 aaPredicted RBP5.47□□□□□ -1.53
CIT-201ENST00000261833 HECTD4Q9Y4D8 3996 aa5.47□□□□□ -1.53
CIT-201ENST00000261833 FRAS1Q86XX4 4008 aa5.44□□□□□ -1.54
CIT-201ENST00000261833 COL7A1Q02388 2944 aa5.42□□□□□ -1.54
CIT-201ENST00000261833 H0YAA0 97 aa5.41□□□□□ -1.54
CIT-201ENST00000261833 OTOGQ6ZRI0 2925 aa5.4□□□□□ -1.55
CIT-201ENST00000261833 DNAH3Q8TD57 4116 aa5.39□□□□□ -1.55
CIT-201ENST00000261833 KRTAP13-2Q52LG2 175 aa5.38□□□□□ -1.55
CIT-201ENST00000261833 C10orf95Q9H7T3 257 aa5.38□□□□□ -1.55
CIT-201ENST00000261833 PP632Q6XCG6 107 aa5.36□□□□□ -1.55
CIT-201ENST00000261833 DNAH7Q8WXX0 4024 aa5.32□□□□□ -1.56
CIT-201ENST00000261833 P0C880 135 aa5.32□□□□□ -1.56
CIT-201ENST00000261833 MEGF8Q7Z7M0 2845 aa5.32□□□□□ -1.56
CIT-201ENST00000261833 KRTAP21-3Q3LHN1 58 aa5.32□□□□□ -1.56
CIT-201ENST00000261833 A0A1B0GVY2 172 aa5.31□□□□□ -1.56
CIT-201ENST00000261833 KRTAP10-8P60410 259 aa5.26□□□□□ -1.57
CIT-201ENST00000261833 TNP1P09430 55 aa5.25□□□□□ -1.57
CIT-201ENST00000261833 KRTAP13-3Q3SY46 172 aa5.19□□□□□ -1.58
CIT-201ENST00000261833 FBN3Q75N90 2809 aa5.19□□□□□ -1.58
CIT-201ENST00000261833 KRTAP10-10P60014 251 aa5.18□□□□□ -1.58
CIT-201ENST00000261833 PRO2289Q9P1D8 64 aa5.17□□□□□ -1.58
CIT-201ENST00000261833 KMT2AQ03164 3969 aa5.16□□□□□ -1.58
CIT-201ENST00000261833 KRTAP1-4P0C5Y4 121 aa5.13□□□□□ -1.59
CIT-201ENST00000261833 VPS13BQ7Z7G8 4022 aa5.09□□□□□ -1.59
CIT-201ENST00000261833 XP32Q5T750 250 aa5.07□□□□□ -1.6
CIT-201ENST00000261833 ANK3Q12955 4377 aaKnown RBP5.06□□□□□ -1.6
CIT-201ENST00000261833 DNAH6Q9C0G6 4158 aa5.01□□□□□ -1.61
CIT-201ENST00000261833 TPRXLQ17RH7 258 aa5.01□□□□□ -1.61
CIT-201ENST00000261833 KRTAP12-2P59991 146 aa4.98□□□□□ -1.61
CIT-201ENST00000261833 PRKDCP78527 4128 aaKnown RBP4.97□□□□□ -1.61
CIT-201ENST00000261833 HUWE1Q7Z6Z7 4374 aaKnown RBP4.91□□□□□ -1.62
CIT-201ENST00000261833 DNAH2Q9P225 4427 aa4.9□□□□□ -1.62
CIT-201ENST00000261833 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms