RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 LINC00472Q9H8W2 130 aa7.95□□□□□ -1.14
TMEM260-201ENST00000261556 NDUFAF8A1L188 74 aa7.94□□□□□ -1.14
TMEM260-201ENST00000261556 PLA2G2DQ9UNK4 145 aa7.94□□□□□ -1.14
TMEM260-201ENST00000261556 LINC00304Q8N9R0 145 aa7.93□□□□□ -1.14
TMEM260-201ENST00000261556 KRTAP16-1A8MUX0 517 aa7.93□□□□□ -1.14
TMEM260-201ENST00000261556 IGLV7-43P04211 117 aa7.93□□□□□ -1.14
TMEM260-201ENST00000261556 HRNRQ86YZ3 2850 aaPredicted RBP7.93□□□□□ -1.14
TMEM260-201ENST00000261556 KRTAP25-1Q3LHN0 102 aa7.92□□□□□ -1.14
TMEM260-201ENST00000261556 C9orf92A6NGG3 77 aa7.87□□□□□ -1.15
TMEM260-201ENST00000261556 Q8N1X5 172 aa7.86□□□□□ -1.15
TMEM260-201ENST00000261556 SPRR1AP35321 89 aa7.85□□□□□ -1.15
TMEM260-201ENST00000261556 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.85□□□□□ -1.15
TMEM260-201ENST00000261556 PLAC8Q9NZF1 115 aa7.82□□□□□ -1.16
TMEM260-201ENST00000261556 TENM3Q9P273 2699 aa7.82□□□□□ -1.16
TMEM260-201ENST00000261556 A8MUU9 505 aa7.8□□□□□ -1.16
TMEM260-201ENST00000261556 KRTAP4-16G5E9R7 235 aaPredicted RBP7.8□□□□□ -1.16
TMEM260-201ENST00000261556 COX6B2Q6YFQ2 88 aa7.8□□□□□ -1.16
TMEM260-201ENST00000261556 KRTAP26-1Q6PEX3 210 aa7.79□□□□□ -1.16
TMEM260-201ENST00000261556 A0A087X002 238 aa7.78□□□□□ -1.16
TMEM260-201ENST00000261556 A0A0D9SG42 100 aa7.78□□□□□ -1.16
TMEM260-201ENST00000261556 Q5W150 140 aa7.78□□□□□ -1.16
TMEM260-201ENST00000261556 NOTCH2NLQ7Z3S9 236 aa7.78□□□□□ -1.16
TMEM260-201ENST00000261556 A0A1B0GU33 70 aa7.77□□□□□ -1.17
TMEM260-201ENST00000261556 DMAC1Q96GE9 116 aa7.76□□□□□ -1.17
TMEM260-201ENST00000261556 LUZP6Q538Z0 58 aa7.75□□□□□ -1.17
TMEM260-201ENST00000261556 KRTAP1-5Q9BYS1 174 aa7.75□□□□□ -1.17
TMEM260-201ENST00000261556 CSMD2Q7Z408 3487 aa7.73□□□□□ -1.17
TMEM260-201ENST00000261556 LINC00483Q53H64 154 aa7.69□□□□□ -1.18
TMEM260-201ENST00000261556 C20orf166-AS1Q96NR2 134 aa7.65□□□□□ -1.18
TMEM260-201ENST00000261556 MXRA5Q9NR99 2828 aa7.65□□□□□ -1.19
TMEM260-201ENST00000261556 NBPF19A0A087WUL8 3843 aa7.63□□□□□ -1.19
TMEM260-201ENST00000261556 KRTAP7-1Q8IUC3 87 aa7.63□□□□□ -1.19
TMEM260-201ENST00000261556 PKD1L1Q8TDX9 2849 aa7.62□□□□□ -1.19
TMEM260-201ENST00000261556 SRRM2Q9UQ35 2752 aaKnown RBP7.61□□□□□ -1.19
TMEM260-201ENST00000261556 TENM1Q9UKZ4 2725 aa7.61□□□□□ -1.19
TMEM260-201ENST00000261556 KRTAP10-2P60368 255 aa7.57□□□□□ -1.2
TMEM260-201ENST00000261556 SPRR1BP22528 89 aa7.56□□□□□ -1.2
TMEM260-201ENST00000261556 P0C880 135 aa7.56□□□□□ -1.2
TMEM260-201ENST00000261556 VPS13CQ709C8 3753 aa7.55□□□□□ -1.2
TMEM260-201ENST00000261556 KRTAP10-1P60331 282 aa7.55□□□□□ -1.2
TMEM260-201ENST00000261556 PDZD2O15018 2839 aa7.54□□□□□ -1.2
TMEM260-201ENST00000261556 Q6ZSA8 131 aa7.54□□□□□ -1.2
TMEM260-201ENST00000261556 KRTAP11-1Q8IUC1 163 aa7.53□□□□□ -1.2
TMEM260-201ENST00000261556 PANO1I0J062 215 aa7.51□□□□□ -1.21
TMEM260-201ENST00000261556 H1FX-AS1Q4G0G2 97 aa7.49□□□□□ -1.21
TMEM260-201ENST00000261556 OTOGQ6ZRI0 2925 aa7.48□□□□□ -1.21
TMEM260-201ENST00000261556 C10orf95Q9H7T3 257 aa7.48□□□□□ -1.21
TMEM260-201ENST00000261556 TENM2Q9NT68 2774 aa7.47□□□□□ -1.21
TMEM260-201ENST00000261556 Q5VSD8 79 aa7.44□□□□□ -1.22
TMEM260-201ENST00000261556 H0YAA0 97 aa7.44□□□□□ -1.22
TMEM260-201ENST00000261556 RPL37P61927 97 aaKnown RBP7.42□□□□□ -1.22
TMEM260-201ENST00000261556 VWFP04275 2813 aa7.39□□□□□ -1.23
TMEM260-201ENST00000261556 TGP01266 2768 aa7.38□□□□□ -1.23
TMEM260-201ENST00000261556 ZNF469Q96JG9 3925 aaPredicted RBP7.37□□□□□ -1.23
TMEM260-201ENST00000261556 M0R2T5 61 aa7.37□□□□□ -1.23
TMEM260-201ENST00000261556 FBN1P35555 2871 aaKnown RBP7.33□□□□□ -1.24
TMEM260-201ENST00000261556 Q6ZRN7 208 aaPredicted RBP7.3□□□□□ -1.24
TMEM260-201ENST00000261556 SEC61BP60468 96 aaKnown RBP7.25□□□□□ -1.25
TMEM260-201ENST00000261556 CAMK2N1Q7Z7J9 78 aa7.24□□□□□ -1.25
TMEM260-201ENST00000261556 AKAP9Q99996 3911 aa7.22□□□□□ -1.25
TMEM260-201ENST00000261556 ANK3Q12955 4377 aaKnown RBP7.22□□□□□ -1.25
TMEM260-201ENST00000261556 S4R3F8 94 aa7.17□□□□□ -1.26
TMEM260-201ENST00000261556 COL7A1Q02388 2944 aa7.17□□□□□ -1.26
TMEM260-201ENST00000261556 TPRXLQ17RH7 258 aa7.16□□□□□ -1.26
TMEM260-201ENST00000261556 KRTAP13-3Q3SY46 172 aa7.16□□□□□ -1.26
TMEM260-201ENST00000261556 KRTAP21-3Q3LHN1 58 aa7.15□□□□□ -1.26
TMEM260-201ENST00000261556 R4GN34 69 aa7.13□□□□□ -1.27
TMEM260-201ENST00000261556 KRTAP13-1Q8IUC0 172 aa7.12□□□□□ -1.27
TMEM260-201ENST00000261556 TRRAPQ9Y4A5 3859 aa7.09□□□□□ -1.28
TMEM260-201ENST00000261556 KRTAP13-2Q52LG2 175 aa7.08□□□□□ -1.28
TMEM260-201ENST00000261556 KRTAP15-1Q3LI76 137 aa7.01□□□□□ -1.29
TMEM260-201ENST00000261556 M0QZ58 72 aa6.98□□□□□ -1.29
TMEM260-201ENST00000261556 PLAC4Q8WY50 150 aa6.97□□□□□ -1.29
TMEM260-201ENST00000261556 RPS29P62273 56 aaKnown RBP6.96□□□□□ -1.3
TMEM260-201ENST00000261556 CSMD3Q7Z407 3707 aa6.94□□□□□ -1.3
TMEM260-201ENST00000261556 KRTAP10-8P60410 259 aa6.82□□□□□ -1.32
TMEM260-201ENST00000261556 FBN3Q75N90 2809 aa6.82□□□□□ -1.32
TMEM260-201ENST00000261556 KRTAP1-4P0C5Y4 121 aa6.8□□□□□ -1.32
TMEM260-201ENST00000261556 KRTAP12-2P59991 146 aa6.74□□□□□ -1.33
TMEM260-201ENST00000261556 KRTAP13-4Q3LI77 160 aa6.73□□□□□ -1.33
TMEM260-201ENST00000261556 MEGF8Q7Z7M0 2845 aa6.72□□□□□ -1.33
TMEM260-201ENST00000261556 KRTAP3-1Q9BYR8 98 aa6.68□□□□□ -1.34
TMEM260-201ENST00000261556 XP32Q5T750 250 aa6.65□□□□□ -1.35
TMEM260-201ENST00000261556 DNHD1Q96M86 4753 aa6.62□□□□□ -1.35
TMEM260-201ENST00000261556 KRTAP12-1P59990 96 aa6.55□□□□□ -1.36
TMEM260-201ENST00000261556 KRTAP10-6P60371 365 aaPredicted RBP6.55□□□□□ -1.36
TMEM260-201ENST00000261556 ANK2Q01484 3957 aa6.52□□□□□ -1.37
TMEM260-201ENST00000261556 A0A1B0GVY2 172 aa6.5□□□□□ -1.37
TMEM260-201ENST00000261556 HUWE1Q7Z6Z7 4374 aaKnown RBP6.49□□□□□ -1.37
TMEM260-201ENST00000261556 ALMS1Q8TCU4 4167 aa6.47□□□□□ -1.37
TMEM260-201ENST00000261556 CMYA5Q8N3K9 4069 aa6.44□□□□□ -1.38
TMEM260-201ENST00000261556 DNAH9Q9NYC9 4486 aa6.42□□□□□ -1.38
TMEM260-201ENST00000261556 TNP1P09430 55 aa6.4□□□□□ -1.39
TMEM260-201ENST00000261556 PRKDCP78527 4128 aaKnown RBP6.39□□□□□ -1.39
TMEM260-201ENST00000261556 KRTAP3-2Q9BYR7 98 aa6.35□□□□□ -1.39
TMEM260-201ENST00000261556 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
TMEM260-201ENST00000261556 KRTAP10-10P60014 251 aa6.34□□□□□ -1.39
TMEM260-201ENST00000261556 DNAH3Q8TD57 4116 aa6.32□□□□□ -1.4
TMEM260-201ENST00000261556 PLECQ15149 4684 aaKnown RBP6.25□□□□□ -1.41
TMEM260-201ENST00000261556 DNAH10Q8IVF4 4471 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms