RNA–Protein interactions for RNA: ENST00000255476.2

RFXAP-201, Transcript of regulatory factor X associated protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFXAP, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-201ENST00000255476 DSCR10P59022 87 aa12.42□□□□□ -0.42
RFXAP-201ENST00000255476 SPINK6Q6UWN8 80 aa12.42□□□□□ -0.42
RFXAP-201ENST00000255476 ZCCHC13Q8WW36 166 aaKnown RBP12.42□□□□□ -0.42
RFXAP-201ENST00000255476 PLA2G1BP04054 148 aaKnown RBP12.4□□□□□ -0.42
RFXAP-201ENST00000255476 SSBP3-AS1Q7Z2R9 100 aa12.39□□□□□ -0.43
RFXAP-201ENST00000255476 LINC00472Q9H8W2 130 aa12.38□□□□□ -0.43
RFXAP-201ENST00000255476 TRAV22A0A0B4J277 110 aa12.37□□□□□ -0.43
RFXAP-201ENST00000255476 K7EQZ3 153 aa12.37□□□□□ -0.43
RFXAP-201ENST00000255476 HSPG2P98160 4391 aa12.35□□□□□ -0.43
RFXAP-201ENST00000255476 PSPHP1O15172 72 aa12.34□□□□□ -0.43
RFXAP-201ENST00000255476 EPPK1P58107 5090 aaKnown RBP12.33□□□□□ -0.43
RFXAP-201ENST00000255476 Q96NJ1 140 aa12.33□□□□□ -0.44
RFXAP-201ENST00000255476 CYP4F30PQ9H0H9 118 aa12.33□□□□□ -0.44
RFXAP-201ENST00000255476 RYR1P21817 5038 aa12.3□□□□□ -0.44
RFXAP-201ENST00000255476 PRR26Q8N8Z3 221 aa12.29□□□□□ -0.44
RFXAP-201ENST00000255476 CD164Q04900 197 aa12.28□□□□□ -0.44
RFXAP-201ENST00000255476 TYMSOSQ8TAI1 123 aa12.28□□□□□ -0.44
RFXAP-201ENST00000255476 CDK2AP2O75956 126 aa12.27□□□□□ -0.44
RFXAP-201ENST00000255476 KIAA1109Q2LD37 5005 aa12.27□□□□□ -0.44
RFXAP-201ENST00000255476 FAM229AH3BQW9 127 aa12.25□□□□□ -0.45
RFXAP-201ENST00000255476 A8MUN3 132 aa12.23□□□□□ -0.45
RFXAP-201ENST00000255476 KRTAP17-1Q9BYP8 105 aa12.23□□□□□ -0.45
RFXAP-201ENST00000255476 A8MWP4 228 aa12.23□□□□□ -0.45
RFXAP-201ENST00000255476 Q5VSD8 79 aa12.22□□□□□ -0.45
RFXAP-201ENST00000255476 A8MU10 97 aa12.21□□□□□ -0.45
RFXAP-201ENST00000255476 Q5VV11 94 aa12.21□□□□□ -0.46
RFXAP-201ENST00000255476 PRR4Q16378 134 aa12.19□□□□□ -0.46
RFXAP-201ENST00000255476 HCG22E2RYF7 251 aa12.17□□□□□ -0.46
RFXAP-201ENST00000255476 WFDC13Q8IUB5 93 aa12.17□□□□□ -0.46
RFXAP-201ENST00000255476 NDUFB1O75438 58 aa12.16□□□□□ -0.46
RFXAP-201ENST00000255476 PKHD1L1Q86WI1 4243 aa12.15□□□□□ -0.46
RFXAP-201ENST00000255476 C4orf48Q5BLP8 95 aa12.15□□□□□ -0.46
RFXAP-201ENST00000255476 LINC00304Q8N9R0 145 aa12.12□□□□□ -0.47
RFXAP-201ENST00000255476 ASB16-AS1Q495Z4 193 aa12.11□□□□□ -0.47
RFXAP-201ENST00000255476 LRP1Q07954 4544 aaKnown RBP12.11□□□□□ -0.47
RFXAP-201ENST00000255476 IGHV6-1A0A0B4J1U7 121 aa12.11□□□□□ -0.47
RFXAP-201ENST00000255476 KTN1-AS1Q86SY8 53 aa12.1□□□□□ -0.47
RFXAP-201ENST00000255476 A0A1B0GVX0 72 aa12.09□□□□□ -0.47
RFXAP-201ENST00000255476 SPINK1P00995 79 aa12.09□□□□□ -0.47
RFXAP-201ENST00000255476 MMP24-AS1A0A0U1RRL7 71 aa12.08□□□□□ -0.48
RFXAP-201ENST00000255476 Q8N9P0 234 aaPredicted RBP12.08□□□□□ -0.48
RFXAP-201ENST00000255476 KRTAP29-1A8MX34 341 aaPredicted RBP12.08□□□□□ -0.48
RFXAP-201ENST00000255476 CASC2Q6XLA1 102 aa12.08□□□□□ -0.48
RFXAP-201ENST00000255476 LIMD2Q9BT23 127 aa12.08□□□□□ -0.48
RFXAP-201ENST00000255476 NOTCH2NLQ7Z3S9 236 aa12.07□□□□□ -0.48
RFXAP-201ENST00000255476 FLG2Q5D862 2391 aaPredicted RBP12.06□□□□□ -0.48
RFXAP-201ENST00000255476 CHKB-CPT1BH3BT56 60 aa12.04□□□□□ -0.48
RFXAP-201ENST00000255476 SPANXA2-OT1Q8N9U9 137 aa12.04□□□□□ -0.48
RFXAP-201ENST00000255476 C8orf17Q9NRJ1 99 aa12.04□□□□□ -0.48
RFXAP-201ENST00000255476 MP68P56378 58 aa12.02□□□□□ -0.49
RFXAP-201ENST00000255476 RBM12B-AS1Q9P1G2 102 aa12.02□□□□□ -0.49
RFXAP-201ENST00000255476 Q8N1X5 172 aa12.02□□□□□ -0.49
RFXAP-201ENST00000255476 LINC00208Q96KT6 92 aa12.01□□□□□ -0.49
RFXAP-201ENST00000255476 SPAG11AQ6PDA7 123 aa12□□□□□ -0.49
RFXAP-201ENST00000255476 ATP11AUNQ6ZP68 121 aa11.98□□□□□ -0.49
RFXAP-201ENST00000255476 LCA10Q71F78 164 aa11.98□□□□□ -0.49
RFXAP-201ENST00000255476 PRR15LQ9BU68 103 aa11.98□□□□□ -0.49
RFXAP-201ENST00000255476 TNXBP22105 4242 aa11.96□□□□□ -0.49
RFXAP-201ENST00000255476 Q75L30 129 aa11.96□□□□□ -0.49
RFXAP-201ENST00000255476 RPS29P62273 56 aaKnown RBP11.95□□□□□ -0.5
RFXAP-201ENST00000255476 A6NN06 94 aa11.94□□□□□ -0.5
RFXAP-201ENST00000255476 MYCBP2O75592 4640 aa11.94□□□□□ -0.5
RFXAP-201ENST00000255476 FAT3Q8TDW7 4589 aa11.93□□□□□ -0.5
RFXAP-201ENST00000255476 SPTSSBQ8NFR3 76 aa11.93□□□□□ -0.5
RFXAP-201ENST00000255476 LOC101927531A0A1B0GV80 90 aa11.93□□□□□ -0.5
RFXAP-201ENST00000255476 H3BPC8 53 aa11.92□□□□□ -0.5
RFXAP-201ENST00000255476 NDUFS5O43920 106 aa11.92□□□□□ -0.5
RFXAP-201ENST00000255476 KRTAP10-8P60410 259 aa11.91□□□□□ -0.5
RFXAP-201ENST00000255476 H0Y9P7 68 aa11.89□□□□□ -0.51
RFXAP-201ENST00000255476 MRPL34Q9BQ48 92 aaKnown RBP11.88□□□□□ -0.51
RFXAP-201ENST00000255476 LINC00313P59037 77 aa11.87□□□□□ -0.51
RFXAP-201ENST00000255476 RETNLBQ9BQ08 111 aa11.87□□□□□ -0.51
RFXAP-201ENST00000255476 A6NED7 52 aa11.86□□□□□ -0.51
RFXAP-201ENST00000255476 KRTAP4-5Q9BYR2 181 aa11.86□□□□□ -0.51
RFXAP-201ENST00000255476 C8orf87E5RJ46 101 aa11.85□□□□□ -0.51
RFXAP-201ENST00000255476 DMBT1Q9UGM3 2413 aaPredicted RBP11.85□□□□□ -0.51
RFXAP-201ENST00000255476 CDC42SE1Q9NRR8 79 aa11.85□□□□□ -0.51
RFXAP-201ENST00000255476 COA5Q86WW8 74 aa11.82□□□□□ -0.52
RFXAP-201ENST00000255476 C7orf65Q6ZTY9 151 aa11.77□□□□□ -0.52
RFXAP-201ENST00000255476 IGLV7-46A0A075B6I9 117 aa11.77□□□□□ -0.53
RFXAP-201ENST00000255476 KRTAP16-1A8MUX0 517 aa11.77□□□□□ -0.53
RFXAP-201ENST00000255476 MT1HL1P0DM35 61 aa11.77□□□□□ -0.53
RFXAP-201ENST00000255476 TP53AIP1Q9HCN2 124 aa11.75□□□□□ -0.53
RFXAP-201ENST00000255476 LINC01558Q9Y6Z2 57 aa11.72□□□□□ -0.53
RFXAP-201ENST00000255476 BIRC6Q9NR09 4857 aa11.72□□□□□ -0.53
RFXAP-201ENST00000255476 C9orf92A6NGG3 77 aa11.7□□□□□ -0.54
RFXAP-201ENST00000255476 Q5W150 140 aa11.69□□□□□ -0.54
RFXAP-201ENST00000255476 ABCA13Q86UQ4 5058 aa11.67□□□□□ -0.54
RFXAP-201ENST00000255476 SPINK7P58062 85 aa11.61□□□□□ -0.55
RFXAP-201ENST00000255476 KRTAP13-3Q3SY46 172 aa11.6□□□□□ -0.55
RFXAP-201ENST00000255476 HERC2O95714 4834 aa11.6□□□□□ -0.55
RFXAP-201ENST00000255476 PCOTHQ58A44 107 aa11.57□□□□□ -0.56
RFXAP-201ENST00000255476 HRES1P13985 223 aa11.52□□□□□ -0.57
RFXAP-201ENST00000255476 C20orf166-AS1Q96NR2 134 aa11.47□□□□□ -0.57
RFXAP-201ENST00000255476 A8MUU9 505 aa11.46□□□□□ -0.57
RFXAP-201ENST00000255476 PRAC1Q96KF2 57 aa11.4□□□□□ -0.59
RFXAP-201ENST00000255476 IGKV2-30P06310 120 aa11.38□□□□□ -0.59
RFXAP-201ENST00000255476 IGKV2D-30A0A075B6S6 120 aa11.38□□□□□ -0.59
RFXAP-201ENST00000255476 J3QL48 77 aa11.36□□□□□ -0.59
RFXAP-201ENST00000255476 XP32Q5T750 250 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms