RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 HRNRQ86YZ3 2850 aaPredicted RBP8.01□□□□□ -1.13
PCDHGA3-201ENST00000253812 KRTAP29-1A8MX34 341 aaPredicted RBP7.99□□□□□ -1.13
PCDHGA3-201ENST00000253812 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.97□□□□□ -1.13
PCDHGA3-201ENST00000253812 SVEP1Q4LDE5 3571 aa7.97□□□□□ -1.13
PCDHGA3-201ENST00000253812 UTP20O75691 2785 aaKnown RBP7.96□□□□□ -1.13
PCDHGA3-201ENST00000253812 KRTAP26-1Q6PEX3 210 aa7.95□□□□□ -1.14
PCDHGA3-201ENST00000253812 NDUFAF8A1L188 74 aa7.95□□□□□ -1.14
PCDHGA3-201ENST00000253812 S4R3F8 94 aa7.94□□□□□ -1.14
PCDHGA3-201ENST00000253812 ADM2Q7Z4H4 148 aa7.93□□□□□ -1.14
PCDHGA3-201ENST00000253812 Q6ZSA8 131 aa7.92□□□□□ -1.14
PCDHGA3-201ENST00000253812 R4GN34 69 aa7.92□□□□□ -1.14
PCDHGA3-201ENST00000253812 BSNQ9UPA5 3926 aa7.91□□□□□ -1.14
PCDHGA3-201ENST00000253812 A0A087X002 238 aa7.91□□□□□ -1.14
PCDHGA3-201ENST00000253812 LCE6AA0A183 80 aa7.91□□□□□ -1.14
PCDHGA3-201ENST00000253812 HIVEP1P15822 2718 aa7.91□□□□□ -1.14
PCDHGA3-201ENST00000253812 TENM4Q6N022 2769 aa7.89□□□□□ -1.15
PCDHGA3-201ENST00000253812 ZANQ9Y493 2812 aa7.89□□□□□ -1.15
PCDHGA3-201ENST00000253812 A8MU10 97 aa7.87□□□□□ -1.15
PCDHGA3-201ENST00000253812 CRYBG3Q68DQ2 2970 aa7.87□□□□□ -1.15
PCDHGA3-201ENST00000253812 APCP25054 2843 aa7.86□□□□□ -1.15
PCDHGA3-201ENST00000253812 CELSR1Q9NYQ6 3014 aa7.86□□□□□ -1.15
PCDHGA3-201ENST00000253812 PLAC8Q9NZF1 115 aa7.82□□□□□ -1.16
PCDHGA3-201ENST00000253812 CELSR2Q9HCU4 2923 aa7.8□□□□□ -1.16
PCDHGA3-201ENST00000253812 KRTAP4-16G5E9R7 235 aaPredicted RBP7.78□□□□□ -1.16
PCDHGA3-201ENST00000253812 PANO1I0J062 215 aa7.78□□□□□ -1.16
PCDHGA3-201ENST00000253812 NIPBLQ6KC79 2804 aaeCLIP7.76□□□□□ -1.17
PCDHGA3-201ENST00000253812 KMT2BQ9UMN6 2715 aaPredicted RBP7.76□□□□□ -1.17
PCDHGA3-201ENST00000253812 KRTAP1-5Q9BYS1 174 aa7.75□□□□□ -1.17
PCDHGA3-201ENST00000253812 M0QZ58 72 aa7.74□□□□□ -1.17
PCDHGA3-201ENST00000253812 PLAC4Q8WY50 150 aa7.72□□□□□ -1.17
PCDHGA3-201ENST00000253812 NF1P21359 2839 aa7.69□□□□□ -1.18
PCDHGA3-201ENST00000253812 A8MUU9 505 aa7.67□□□□□ -1.18
PCDHGA3-201ENST00000253812 SEC61BP60468 96 aaKnown RBP7.66□□□□□ -1.18
PCDHGA3-201ENST00000253812 MXRA5Q9NR99 2828 aa7.65□□□□□ -1.18
PCDHGA3-201ENST00000253812 M0R2T5 61 aa7.65□□□□□ -1.19
PCDHGA3-201ENST00000253812 KRTAP11-1Q8IUC1 163 aa7.65□□□□□ -1.19
PCDHGA3-201ENST00000253812 C20orf166-AS1Q96NR2 134 aa7.64□□□□□ -1.19
PCDHGA3-201ENST00000253812 FBN2P35556 2912 aa7.64□□□□□ -1.19
PCDHGA3-201ENST00000253812 NOTCH2NLQ7Z3S9 236 aa7.63□□□□□ -1.19
PCDHGA3-201ENST00000253812 CUBNO60494 3623 aa7.62□□□□□ -1.19
PCDHGA3-201ENST00000253812 CSMD2Q7Z408 3487 aa7.61□□□□□ -1.19
PCDHGA3-201ENST00000253812 VPS13CQ709C8 3753 aa7.58□□□□□ -1.2
PCDHGA3-201ENST00000253812 ZFHX3Q15911 3703 aa7.56□□□□□ -1.2
PCDHGA3-201ENST00000253812 KRTAP21-3Q3LHN1 58 aa7.54□□□□□ -1.2
PCDHGA3-201ENST00000253812 Q5VSD8 79 aa7.52□□□□□ -1.2
PCDHGA3-201ENST00000253812 KRTAP10-2P60368 255 aa7.52□□□□□ -1.21
PCDHGA3-201ENST00000253812 KRTAP10-1P60331 282 aa7.5□□□□□ -1.21
PCDHGA3-201ENST00000253812 TENM3Q9P273 2699 aa7.43□□□□□ -1.22
PCDHGA3-201ENST00000253812 C10orf95Q9H7T3 257 aa7.38□□□□□ -1.23
PCDHGA3-201ENST00000253812 Q6ZRN7 208 aaPredicted RBP7.36□□□□□ -1.23
PCDHGA3-201ENST00000253812 RPS29P62273 56 aaKnown RBP7.34□□□□□ -1.23
PCDHGA3-201ENST00000253812 PP632Q6XCG6 107 aa7.33□□□□□ -1.24
PCDHGA3-201ENST00000253812 P0C880 135 aa7.33□□□□□ -1.24
PCDHGA3-201ENST00000253812 KRTAP7-1Q8IUC3 87 aa7.33□□□□□ -1.24
PCDHGA3-201ENST00000253812 TNP1P09430 55 aa7.31□□□□□ -1.24
PCDHGA3-201ENST00000253812 NBPF19A0A087WUL8 3843 aa7.28□□□□□ -1.24
PCDHGA3-201ENST00000253812 KRTAP13-1Q8IUC0 172 aa7.27□□□□□ -1.25
PCDHGA3-201ENST00000253812 H0YAA0 97 aa7.25□□□□□ -1.25
PCDHGA3-201ENST00000253812 TENM2Q9NT68 2774 aa7.24□□□□□ -1.25
PCDHGA3-201ENST00000253812 VWFP04275 2813 aa7.22□□□□□ -1.25
PCDHGA3-201ENST00000253812 ZNF469Q96JG9 3925 aaPredicted RBP7.22□□□□□ -1.25
PCDHGA3-201ENST00000253812 TENM1Q9UKZ4 2725 aa7.22□□□□□ -1.25
PCDHGA3-201ENST00000253812 PDZD2O15018 2839 aa7.2□□□□□ -1.26
PCDHGA3-201ENST00000253812 KRTAP13-2Q52LG2 175 aa7.18□□□□□ -1.26
PCDHGA3-201ENST00000253812 PKD1L1Q8TDX9 2849 aa7.18□□□□□ -1.26
PCDHGA3-201ENST00000253812 OTOGQ6ZRI0 2925 aa7.15□□□□□ -1.27
PCDHGA3-201ENST00000253812 FBN1P35555 2871 aaKnown RBP7.12□□□□□ -1.27
PCDHGA3-201ENST00000253812 KRTAP10-8P60410 259 aa7.07□□□□□ -1.28
PCDHGA3-201ENST00000253812 AKAP9Q99996 3911 aa7.02□□□□□ -1.29
PCDHGA3-201ENST00000253812 TGP01266 2768 aa7□□□□□ -1.29
PCDHGA3-201ENST00000253812 TRRAPQ9Y4A5 3859 aa6.99□□□□□ -1.29
PCDHGA3-201ENST00000253812 ANK3Q12955 4377 aaKnown RBP6.99□□□□□ -1.29
PCDHGA3-201ENST00000253812 SRRM2Q9UQ35 2752 aaKnown RBP6.96□□□□□ -1.3
PCDHGA3-201ENST00000253812 KRTAP1-4P0C5Y4 121 aa6.84□□□□□ -1.32
PCDHGA3-201ENST00000253812 KRTAP13-3Q3SY46 172 aa6.78□□□□□ -1.32
PCDHGA3-201ENST00000253812 TPRXLQ17RH7 258 aa6.75□□□□□ -1.33
PCDHGA3-201ENST00000253812 XP32Q5T750 250 aa6.72□□□□□ -1.33
PCDHGA3-201ENST00000253812 KRTAP12-2P59991 146 aa6.66□□□□□ -1.34
PCDHGA3-201ENST00000253812 FBN3Q75N90 2809 aa6.63□□□□□ -1.35
PCDHGA3-201ENST00000253812 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
PCDHGA3-201ENST00000253812 KRTAP12-1P59990 96 aa6.58□□□□□ -1.36
PCDHGA3-201ENST00000253812 A0A1B0GVY2 172 aa6.56□□□□□ -1.36
PCDHGA3-201ENST00000253812 INE1O15225 51 aa6.52□□□□□ -1.37
PCDHGA3-201ENST00000253812 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
PCDHGA3-201ENST00000253812 PRO2289Q9P1D8 64 aa6.5□□□□□ -1.37
PCDHGA3-201ENST00000253812 CSMD3Q7Z407 3707 aa6.49□□□□□ -1.37
PCDHGA3-201ENST00000253812 MEGF8Q7Z7M0 2845 aa6.47□□□□□ -1.37
PCDHGA3-201ENST00000253812 COL7A1Q02388 2944 aa6.45□□□□□ -1.38
PCDHGA3-201ENST00000253812 ANK2Q01484 3957 aa6.45□□□□□ -1.38
PCDHGA3-201ENST00000253812 KRTAP10-10P60014 251 aa6.4□□□□□ -1.39
PCDHGA3-201ENST00000253812 HUWE1Q7Z6Z7 4374 aaKnown RBP6.38□□□□□ -1.39
PCDHGA3-201ENST00000253812 KRTAP3-1Q9BYR8 98 aa6.35□□□□□ -1.39
PCDHGA3-201ENST00000253812 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
PCDHGA3-201ENST00000253812 DNAH10Q8IVF4 4471 aa6.3□□□□□ -1.4
PCDHGA3-201ENST00000253812 LYSTQ99698 3801 aa6.23□□□□□ -1.41
PCDHGA3-201ENST00000253812 CMYA5Q8N3K9 4069 aa6.23□□□□□ -1.41
PCDHGA3-201ENST00000253812 DNAH9Q9NYC9 4486 aa6.19□□□□□ -1.42
PCDHGA3-201ENST00000253812 DNAH3Q8TD57 4116 aa6.17□□□□□ -1.42
PCDHGA3-201ENST00000253812 PLECQ15149 4684 aaKnown RBP6.16□□□□□ -1.42
PCDHGA3-201ENST00000253812 DNAH7Q8WXX0 4024 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms