RNA–Protein interactions for RNA: ENST00000252999.7

LAMA5-201, Transcript of laminin subunit alpha 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMA5, Length 11,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-201ENST00000252999 KRTAP29-1A8MX34 341 aaPredicted RBP6.63□□□□□ -1.35
LAMA5-201ENST00000252999 LAMA1P25391 3075 aa6.62□□□□□ -1.35
LAMA5-201ENST00000252999 A8MUU9 505 aa6.62□□□□□ -1.35
LAMA5-201ENST00000252999 SRRM2Q9UQ35 2752 aaKnown RBP6.61□□□□□ -1.35
LAMA5-201ENST00000252999 KRTAP10-2P60368 255 aa6.61□□□□□ -1.35
LAMA5-201ENST00000252999 A0A087X002 238 aa6.61□□□□□ -1.35
LAMA5-201ENST00000252999 NOTCH2NLQ7Z3S9 236 aa6.61□□□□□ -1.35
LAMA5-201ENST00000252999 RANBP2P49792 3224 aaKnown RBP6.58□□□□□ -1.36
LAMA5-201ENST00000252999 FBN2P35556 2912 aa6.55□□□□□ -1.36
LAMA5-201ENST00000252999 KRTAP4-16G5E9R7 235 aaPredicted RBP6.54□□□□□ -1.36
LAMA5-201ENST00000252999 ADGRG4Q8IZF6 3080 aa6.5□□□□□ -1.37
LAMA5-201ENST00000252999 ATMQ13315 3056 aa6.5□□□□□ -1.37
LAMA5-201ENST00000252999 CELSR1Q9NYQ6 3014 aa6.48□□□□□ -1.37
LAMA5-201ENST00000252999 TNP1P09430 55 aa6.46□□□□□ -1.38
LAMA5-201ENST00000252999 XIRP2A4UGR9 3374 aa6.46□□□□□ -1.38
LAMA5-201ENST00000252999 LCE6AA0A183 80 aa6.44□□□□□ -1.38
LAMA5-201ENST00000252999 BOD1L1Q8NFC6 3051 aa6.44□□□□□ -1.38
LAMA5-201ENST00000252999 CELSR3Q9NYQ7 3312 aa6.44□□□□□ -1.38
LAMA5-201ENST00000252999 KRTAP11-1Q8IUC1 163 aa6.43□□□□□ -1.38
LAMA5-201ENST00000252999 DMXL1Q9Y485 3027 aa6.42□□□□□ -1.38
LAMA5-201ENST00000252999 COL6A3P12111 3177 aa6.4□□□□□ -1.38
LAMA5-201ENST00000252999 MKI67P46013 3256 aaKnown RBP6.38□□□□□ -1.39
LAMA5-201ENST00000252999 MXRA5Q9NR99 2828 aa6.34□□□□□ -1.39
LAMA5-201ENST00000252999 UNC80Q8N2C7 3258 aa6.33□□□□□ -1.4
LAMA5-201ENST00000252999 RPS29P62273 56 aaKnown RBP6.31□□□□□ -1.4
LAMA5-201ENST00000252999 TENM2Q9NT68 2774 aa6.31□□□□□ -1.4
LAMA5-201ENST00000252999 PP632Q6XCG6 107 aa6.29□□□□□ -1.4
LAMA5-201ENST00000252999 KRTAP13-2Q52LG2 175 aa6.29□□□□□ -1.4
LAMA5-201ENST00000252999 COL7A1Q02388 2944 aa6.27□□□□□ -1.41
LAMA5-201ENST00000252999 CFAP47Q6ZTR5 3102 aa6.26□□□□□ -1.41
LAMA5-201ENST00000252999 KRTAP10-8P60410 259 aa6.25□□□□□ -1.41
LAMA5-201ENST00000252999 LAMA3Q16787 3333 aa6.24□□□□□ -1.41
LAMA5-201ENST00000252999 P0C880 135 aa6.23□□□□□ -1.41
LAMA5-201ENST00000252999 Q6ZRN7 208 aaPredicted RBP6.23□□□□□ -1.41
LAMA5-201ENST00000252999 VCANP13611 3396 aa6.21□□□□□ -1.42
LAMA5-201ENST00000252999 DNAH14Q0VDD8 3507 aa6.21□□□□□ -1.42
LAMA5-201ENST00000252999 KRTAP7-1Q8IUC3 87 aa6.2□□□□□ -1.42
LAMA5-201ENST00000252999 HRNRQ86YZ3 2850 aaPredicted RBP6.2□□□□□ -1.42
LAMA5-201ENST00000252999 H0YAA0 97 aa6.19□□□□□ -1.42
LAMA5-201ENST00000252999 BRCA2P51587 3418 aa6.19□□□□□ -1.42
LAMA5-201ENST00000252999 KRTAP13-1Q8IUC0 172 aa6.16□□□□□ -1.42
LAMA5-201ENST00000252999 A0A1B0GVY2 172 aa6.11□□□□□ -1.43
LAMA5-201ENST00000252999 USP34Q70CQ2 3546 aa6.06□□□□□ -1.44
LAMA5-201ENST00000252999 MEGF8Q7Z7M0 2845 aa6.06□□□□□ -1.44
LAMA5-201ENST00000252999 SPEGQ15772 3267 aa6.05□□□□□ -1.44
LAMA5-201ENST00000252999 XP32Q5T750 250 aa5.98□□□□□ -1.45
LAMA5-201ENST00000252999 PRO2289Q9P1D8 64 aa5.97□□□□□ -1.45
LAMA5-201ENST00000252999 KRTAP10-10P60014 251 aa5.97□□□□□ -1.45
LAMA5-201ENST00000252999 MYO15AQ9UKN7 3530 aa5.96□□□□□ -1.46
LAMA5-201ENST00000252999 FBN3Q75N90 2809 aa5.96□□□□□ -1.46
LAMA5-201ENST00000252999 FBN1P35555 2871 aaKnown RBP5.95□□□□□ -1.46
LAMA5-201ENST00000252999 EYSQ5T1H1 3165 aa5.92□□□□□ -1.46
LAMA5-201ENST00000252999 SPTBN5Q9NRC6 3674 aaKnown RBP5.91□□□□□ -1.46
LAMA5-201ENST00000252999 ZFHX4Q86UP3 3567 aa5.87□□□□□ -1.47
LAMA5-201ENST00000252999 SZT2Q5T011 3432 aa5.86□□□□□ -1.47
LAMA5-201ENST00000252999 CDH23Q9H251 3354 aa5.83□□□□□ -1.48
LAMA5-201ENST00000252999 KRTAP1-4P0C5Y4 121 aa5.82□□□□□ -1.48
LAMA5-201ENST00000252999 KRTAP12-2P59991 146 aa5.79□□□□□ -1.48
LAMA5-201ENST00000252999 TPRXLQ17RH7 258 aa5.78□□□□□ -1.48
LAMA5-201ENST00000252999 OTOGQ6ZRI0 2925 aa5.75□□□□□ -1.49
LAMA5-201ENST00000252999 ZFHX3Q15911 3703 aa5.71□□□□□ -1.5
LAMA5-201ENST00000252999 KRTAP13-4Q3LI77 160 aa5.69□□□□□ -1.5
LAMA5-201ENST00000252999 KRTAP13-3Q3SY46 172 aa5.69□□□□□ -1.5
LAMA5-201ENST00000252999 WDFY3Q8IZQ1 3526 aa5.69□□□□□ -1.5
LAMA5-201ENST00000252999 LOC400499M0QZD8 3231 aa5.69□□□□□ -1.5
LAMA5-201ENST00000252999 NBPF19A0A087WUL8 3843 aa5.68□□□□□ -1.5
LAMA5-201ENST00000252999 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
LAMA5-201ENST00000252999 SMG1Q96Q15 3661 aaKnown RBP5.61□□□□□ -1.51
LAMA5-201ENST00000252999 KRTAP12-1P59990 96 aa5.6□□□□□ -1.51
LAMA5-201ENST00000252999 DMDP11532 3685 aa5.59□□□□□ -1.51
LAMA5-201ENST00000252999 DCHS1Q96JQ0 3298 aa5.52□□□□□ -1.53
LAMA5-201ENST00000252999 LAMA5O15230 3695 aa5.51□□□□□ -1.53
LAMA5-201ENST00000252999 ASPMQ8IZT6 3477 aa5.5□□□□□ -1.53
LAMA5-201ENST00000252999 SPENQ96T58 3664 aaKnown RBP5.44□□□□□ -1.54
LAMA5-201ENST00000252999 INE1O15225 51 aa5.43□□□□□ -1.54
LAMA5-201ENST00000252999 RELNP78509 3460 aa5.42□□□□□ -1.54
LAMA5-201ENST00000252999 KRTAP21-3Q3LHN1 58 aa5.39□□□□□ -1.55
LAMA5-201ENST00000252999 CRCT1Q9UGL9 99 aa5.37□□□□□ -1.55
LAMA5-201ENST00000252999 TRRAPQ9Y4A5 3859 aa5.36□□□□□ -1.55
LAMA5-201ENST00000252999 CSMD1Q96PZ7 3565 aa5.34□□□□□ -1.56
LAMA5-201ENST00000252999 KRTAP3-1Q9BYR8 98 aa5.31□□□□□ -1.56
LAMA5-201ENST00000252999 VPS13CQ709C8 3753 aa5.28□□□□□ -1.56
LAMA5-201ENST00000252999 KRTAP10-6P60371 365 aaPredicted RBP5.27□□□□□ -1.57
LAMA5-201ENST00000252999 KRTAP10-12P60413 245 aa5.22□□□□□ -1.57
LAMA5-201ENST00000252999 CUBNO60494 3623 aa5.21□□□□□ -1.58
LAMA5-201ENST00000252999 CSMD3Q7Z407 3707 aa5.15□□□□□ -1.59
LAMA5-201ENST00000252999 AKAP9Q99996 3911 aa5.1□□□□□ -1.59
LAMA5-201ENST00000252999 KRTAP12-3P60328 96 aa5.07□□□□□ -1.6
LAMA5-201ENST00000252999 KRTAP3-2Q9BYR7 98 aa5.02□□□□□ -1.61
LAMA5-201ENST00000252999 MUC3AQ02505 3323 aa5.01□□□□□ -1.61
LAMA5-201ENST00000252999 KRTAP10-5P60370 271 aa5□□□□□ -1.61
LAMA5-201ENST00000252999 SVEP1Q4LDE5 3571 aa5□□□□□ -1.61
LAMA5-201ENST00000252999 KRTAP3-3Q9BYR6 98 aa4.96□□□□□ -1.62
LAMA5-201ENST00000252999 LCE3AQ5TA76 89 aa4.94□□□□□ -1.62
LAMA5-201ENST00000252999 ALMS1Q8TCU4 4167 aa4.89□□□□□ -1.63
LAMA5-201ENST00000252999 LYSTQ99698 3801 aa4.86□□□□□ -1.63
LAMA5-201ENST00000252999 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
LAMA5-201ENST00000252999 BSNQ9UPA5 3926 aa4.85□□□□□ -1.63
LAMA5-201ENST00000252999 CSMD2Q7Z408 3487 aa4.8□□□□□ -1.64
LAMA5-201ENST00000252999 MT1HL1P0DM35 61 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms