RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 RBM12B-AS1Q9P1G2 102 aa11.32□□□□□ -0.6
SNX4-201ENST00000251775 IGHV6-1A0A0B4J1U7 121 aa11.31□□□□□ -0.6
SNX4-201ENST00000251775 PSORS1C2Q9UIG4 136 aa11.31□□□□□ -0.6
SNX4-201ENST00000251775 A0A1B0GVX0 72 aa11.3□□□□□ -0.6
SNX4-201ENST00000251775 LINC00483Q53H64 154 aa11.29□□□□□ -0.6
SNX4-201ENST00000251775 KMT2AQ03164 3969 aa11.29□□□□□ -0.6
SNX4-201ENST00000251775 SPINK7P58062 85 aa11.29□□□□□ -0.6
SNX4-201ENST00000251775 IGLV5-52A0A0A0MRZ9 124 aa11.28□□□□□ -0.6
SNX4-201ENST00000251775 HECTD4Q9Y4D8 3996 aa11.28□□□□□ -0.6
SNX4-201ENST00000251775 MRPL34Q9BQ48 92 aaKnown RBP11.27□□□□□ -0.61
SNX4-201ENST00000251775 MEGF8Q7Z7M0 2845 aa11.26□□□□□ -0.61
SNX4-201ENST00000251775 DNAH17Q9UFH2 4485 aa11.25□□□□□ -0.61
SNX4-201ENST00000251775 DNAH2Q9P225 4427 aa11.25□□□□□ -0.61
SNX4-201ENST00000251775 A0A087X002 238 aa11.25□□□□□ -0.61
SNX4-201ENST00000251775 NOTCH2NLQ7Z3S9 236 aa11.25□□□□□ -0.61
SNX4-201ENST00000251775 WWC2-AS2Q96NR7 200 aa11.24□□□□□ -0.61
SNX4-201ENST00000251775 ANAPC11Q9NYG5 84 aa11.23□□□□□ -0.61
SNX4-201ENST00000251775 C1orf134Q5TEV5 83 aa11.22□□□□□ -0.61
SNX4-201ENST00000251775 ZNF706Q9Y5V0 76 aaPredicted RBP11.22□□□□□ -0.61
SNX4-201ENST00000251775 ZNF861PO60384 105 aa11.21□□□□□ -0.61
SNX4-201ENST00000251775 FBN3Q75N90 2809 aa11.21□□□□□ -0.62
SNX4-201ENST00000251775 CDK2AP2O75956 126 aa11.2□□□□□ -0.62
SNX4-201ENST00000251775 C7orf65Q6ZTY9 151 aa11.2□□□□□ -0.62
SNX4-201ENST00000251775 DNAH8Q96JB1 4490 aa11.18□□□□□ -0.62
SNX4-201ENST00000251775 PRR26Q8N8Z3 221 aa11.17□□□□□ -0.62
SNX4-201ENST00000251775 TGP01266 2768 aa11.17□□□□□ -0.62
SNX4-201ENST00000251775 LY6G6CO95867 125 aa11.16□□□□□ -0.62
SNX4-201ENST00000251775 Q5W150 140 aa11.15□□□□□ -0.62
SNX4-201ENST00000251775 FRAS1Q86XX4 4008 aa11.14□□□□□ -0.63
SNX4-201ENST00000251775 KRTAP13-3Q3SY46 172 aa11.13□□□□□ -0.63
SNX4-201ENST00000251775 DNHD1Q96M86 4753 aa11.12□□□□□ -0.63
SNX4-201ENST00000251775 IGLV7-43P04211 117 aa11.1□□□□□ -0.63
SNX4-201ENST00000251775 ALMS1Q8TCU4 4167 aa11.08□□□□□ -0.64
SNX4-201ENST00000251775 KRTAP10-2P60368 255 aa11.06□□□□□ -0.64
SNX4-201ENST00000251775 SPINK6Q6UWN8 80 aa11.05□□□□□ -0.64
SNX4-201ENST00000251775 ACYP2P14621 99 aa11.04□□□□□ -0.64
SNX4-201ENST00000251775 CIRBP-AS1Q8TBR5 109 aa11.03□□□□□ -0.64
SNX4-201ENST00000251775 DNAH6Q9C0G6 4158 aa11□□□□□ -0.65
SNX4-201ENST00000251775 DMAC1Q96GE9 116 aa10.98□□□□□ -0.65
SNX4-201ENST00000251775 DNAH5Q8TE73 4624 aa10.98□□□□□ -0.65
SNX4-201ENST00000251775 LINC00313P59037 77 aa10.96□□□□□ -0.65
SNX4-201ENST00000251775 DNAH11Q96DT5 4516 aa10.95□□□□□ -0.66
SNX4-201ENST00000251775 KRTAP10-1P60331 282 aa10.92□□□□□ -0.66
SNX4-201ENST00000251775 SSBP3-AS1Q7Z2R9 100 aa10.91□□□□□ -0.66
SNX4-201ENST00000251775 PRAC1Q96KF2 57 aa10.91□□□□□ -0.66
SNX4-201ENST00000251775 C8orf87E5RJ46 101 aa10.9□□□□□ -0.66
SNX4-201ENST00000251775 Q6ZSA8 131 aa10.9□□□□□ -0.66
SNX4-201ENST00000251775 A0A1B0GU69 56 aa10.89□□□□□ -0.67
SNX4-201ENST00000251775 ADM2Q7Z4H4 148 aa10.87□□□□□ -0.67
SNX4-201ENST00000251775 SPATA8Q6RVD6 105 aa10.86□□□□□ -0.67
SNX4-201ENST00000251775 RETNLBQ9BQ08 111 aa10.85□□□□□ -0.67
SNX4-201ENST00000251775 PLA2G1BP04054 148 aaKnown RBP10.85□□□□□ -0.67
SNX4-201ENST00000251775 KRTAP13-2Q52LG2 175 aa10.85□□□□□ -0.67
SNX4-201ENST00000251775 PKD1P98161 4303 aa10.84□□□□□ -0.67
SNX4-201ENST00000251775 FAM229AH3BQW9 127 aa10.84□□□□□ -0.67
SNX4-201ENST00000251775 HYDINQ4G0P3 5121 aa10.84□□□□□ -0.67
SNX4-201ENST00000251775 IGKV2-30P06310 120 aa10.83□□□□□ -0.68
SNX4-201ENST00000251775 LRP1BQ9NZR2 4599 aa10.8□□□□□ -0.68
SNX4-201ENST00000251775 FAT2Q9NYQ8 4349 aa10.79□□□□□ -0.68
SNX4-201ENST00000251775 MIR22HGQ0VDD5 57 aa10.76□□□□□ -0.69
SNX4-201ENST00000251775 KRTAP1-4P0C5Y4 121 aa10.75□□□□□ -0.69
SNX4-201ENST00000251775 UQCR11O14957 56 aa10.74□□□□□ -0.69
SNX4-201ENST00000251775 KRTAP16-1A8MUX0 517 aa10.71□□□□□ -0.7
SNX4-201ENST00000251775 LINC01554Q52M75 96 aa10.67□□□□□ -0.7
SNX4-201ENST00000251775 IGKV2D-30A0A075B6S6 120 aa10.65□□□□□ -0.7
SNX4-201ENST00000251775 VPS13BQ7Z7G8 4022 aa10.65□□□□□ -0.71
SNX4-201ENST00000251775 KRTAP21-3Q3LHN1 58 aa10.61□□□□□ -0.71
SNX4-201ENST00000251775 TYMSOSQ8TAI1 123 aa10.58□□□□□ -0.72
SNX4-201ENST00000251775 C4orf48Q5BLP8 95 aa10.55□□□□□ -0.72
SNX4-201ENST00000251775 CSAG1Q6PB30 78 aa10.53□□□□□ -0.72
SNX4-201ENST00000251775 PKHD1P08F94 4074 aa10.51□□□□□ -0.73
SNX4-201ENST00000251775 SPINK1P00995 79 aa10.51□□□□□ -0.73
SNX4-201ENST00000251775 SACSQ9NZJ4 4579 aa10.49□□□□□ -0.73
SNX4-201ENST00000251775 SMR3BP02814 79 aaPredicted RBP10.46□□□□□ -0.74
SNX4-201ENST00000251775 Q8N1X5 172 aa10.44□□□□□ -0.74
SNX4-201ENST00000251775 LINC00304Q8N9R0 145 aa10.43□□□□□ -0.74
SNX4-201ENST00000251775 DYNC1H1Q14204 4646 aaKnown RBP10.4□□□□□ -0.74
SNX4-201ENST00000251775 A0A1B0GVY2 172 aa10.39□□□□□ -0.75
SNX4-201ENST00000251775 RPS29P62273 56 aaKnown RBP10.37□□□□□ -0.75
SNX4-201ENST00000251775 H0YAA0 97 aa10.34□□□□□ -0.75
SNX4-201ENST00000251775 KRTAP10-4P60372 401 aaPredicted RBP10.34□□□□□ -0.75
SNX4-201ENST00000251775 A8MUU9 505 aa10.31□□□□□ -0.76
SNX4-201ENST00000251775 FAT1Q14517 4588 aa10.27□□□□□ -0.76
SNX4-201ENST00000251775 APOBP04114 4563 aaKnown RBP10.27□□□□□ -0.77
SNX4-201ENST00000251775 H3BS24 57 aa10.23□□□□□ -0.77
SNX4-201ENST00000251775 C9orf92A6NGG3 77 aa10.22□□□□□ -0.77
SNX4-201ENST00000251775 PKHD1L1Q86WI1 4243 aa10.21□□□□□ -0.77
SNX4-201ENST00000251775 A0A1B0GU33 70 aa10.2□□□□□ -0.78
SNX4-201ENST00000251775 KRTAP25-1Q3LHN0 102 aa10.19□□□□□ -0.78
SNX4-201ENST00000251775 KRTAP3-1Q9BYR8 98 aa10.18□□□□□ -0.78
SNX4-201ENST00000251775 RYR2Q92736 4967 aa10.17□□□□□ -0.78
SNX4-201ENST00000251775 H1FX-AS1Q4G0G2 97 aa10.15□□□□□ -0.78
SNX4-201ENST00000251775 C20orf166-AS1Q96NR2 134 aa10.15□□□□□ -0.78
SNX4-201ENST00000251775 FLG2Q5D862 2391 aaPredicted RBP10.05□□□□□ -0.8
SNX4-201ENST00000251775 KMT2CQ8NEZ4 4911 aaKnown RBP10.05□□□□□ -0.8
SNX4-201ENST00000251775 ROMO1P60602 79 aa10.02□□□□□ -0.8
SNX4-201ENST00000251775 COX6B2Q6YFQ2 88 aa9.96□□□□□ -0.81
SNX4-201ENST00000251775 CRIPTQ9P021 101 aa9.96□□□□□ -0.82
SNX4-201ENST00000251775 K7ERS5 55 aa9.92□□□□□ -0.82
SNX4-201ENST00000251775 KRTAP10-8P60410 259 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms