RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 VPS13BQ7Z7G8 4022 aa8.87□□□□□ -0.99
MBD4-201ENST00000249910 KRTAP10-1P60331 282 aa8.86□□□□□ -0.99
MBD4-201ENST00000249910 MOBPQ13875 183 aa8.85□□□□□ -0.99
MBD4-201ENST00000249910 LINC00483Q53H64 154 aa8.85□□□□□ -0.99
MBD4-201ENST00000249910 HCG22E2RYF7 251 aa8.83□□□□□ -1
MBD4-201ENST00000249910 IGLV7-43P04211 117 aa8.83□□□□□ -1
MBD4-201ENST00000249910 CHKB-CPT1BH3BT56 60 aa8.82□□□□□ -1
MBD4-201ENST00000249910 WFDC13Q8IUB5 93 aa8.81□□□□□ -1
MBD4-201ENST00000249910 LINC00472Q9H8W2 130 aa8.81□□□□□ -1
MBD4-201ENST00000249910 ZNF706Q9Y5V0 76 aaPredicted RBP8.81□□□□□ -1
MBD4-201ENST00000249910 KMT2CQ8NEZ4 4911 aaKnown RBP8.8□□□□□ -1
MBD4-201ENST00000249910 CYP4F30PQ9H0H9 118 aa8.79□□□□□ -1
MBD4-201ENST00000249910 LCE2DQ5TA82 110 aaPredicted RBP8.78□□□□□ -1
MBD4-201ENST00000249910 Q6ZSA8 131 aa8.77□□□□□ -1.01
MBD4-201ENST00000249910 LIMD2Q9BT23 127 aa8.75□□□□□ -1.01
MBD4-201ENST00000249910 Q96NJ1 140 aa8.74□□□□□ -1.01
MBD4-201ENST00000249910 LCE6AA0A183 80 aa8.73□□□□□ -1.01
MBD4-201ENST00000249910 A8MWP4 228 aa8.73□□□□□ -1.01
MBD4-201ENST00000249910 ZCCHC13Q8WW36 166 aaKnown RBP8.71□□□□□ -1.02
MBD4-201ENST00000249910 FAT1Q14517 4588 aa8.7□□□□□ -1.02
MBD4-201ENST00000249910 DYNC1H1Q14204 4646 aaKnown RBP8.7□□□□□ -1.02
MBD4-201ENST00000249910 A0A087X002 238 aa8.7□□□□□ -1.02
MBD4-201ENST00000249910 Q8N9P0 234 aaPredicted RBP8.7□□□□□ -1.02
MBD4-201ENST00000249910 CDC42SE1Q9NRR8 79 aa8.7□□□□□ -1.02
MBD4-201ENST00000249910 CASC2Q6XLA1 102 aa8.69□□□□□ -1.02
MBD4-201ENST00000249910 Q75L30 129 aa8.69□□□□□ -1.02
MBD4-201ENST00000249910 KRTAP29-1A8MX34 341 aaPredicted RBP8.69□□□□□ -1.02
MBD4-201ENST00000249910 PRR15LQ9BU68 103 aa8.68□□□□□ -1.02
MBD4-201ENST00000249910 A6NED7 52 aa8.68□□□□□ -1.02
MBD4-201ENST00000249910 LINC01554Q52M75 96 aa8.67□□□□□ -1.02
MBD4-201ENST00000249910 KRTAP3-3Q9BYR6 98 aa8.67□□□□□ -1.02
MBD4-201ENST00000249910 KRTAP3-2Q9BYR7 98 aa8.67□□□□□ -1.02
MBD4-201ENST00000249910 SPINK6Q6UWN8 80 aa8.66□□□□□ -1.02
MBD4-201ENST00000249910 NDUFB1O75438 58 aa8.65□□□□□ -1.02
MBD4-201ENST00000249910 RYR2Q92736 4967 aa8.64□□□□□ -1.03
MBD4-201ENST00000249910 IGHV6-1A0A0B4J1U7 121 aa8.64□□□□□ -1.03
MBD4-201ENST00000249910 MMP24-AS1A0A0U1RRL7 71 aa8.63□□□□□ -1.03
MBD4-201ENST00000249910 KRTAP13-2Q52LG2 175 aa8.63□□□□□ -1.03
MBD4-201ENST00000249910 LINC00313P59037 77 aa8.62□□□□□ -1.03
MBD4-201ENST00000249910 PRR4Q16378 134 aa8.62□□□□□ -1.03
MBD4-201ENST00000249910 NOTCH2NLQ7Z3S9 236 aa8.62□□□□□ -1.03
MBD4-201ENST00000249910 LOC101927531A0A1B0GV80 90 aa8.62□□□□□ -1.03
MBD4-201ENST00000249910 SMR3BP02814 79 aaPredicted RBP8.61□□□□□ -1.03
MBD4-201ENST00000249910 KRTAP1-4P0C5Y4 121 aa8.59□□□□□ -1.03
MBD4-201ENST00000249910 SSBP3-AS1Q7Z2R9 100 aa8.58□□□□□ -1.04
MBD4-201ENST00000249910 CDK2AP2O75956 126 aa8.57□□□□□ -1.04
MBD4-201ENST00000249910 C8orf17Q9NRJ1 99 aa8.57□□□□□ -1.04
MBD4-201ENST00000249910 APOBP04114 4563 aaKnown RBP8.57□□□□□ -1.04
MBD4-201ENST00000249910 A0A1B0GVX0 72 aa8.57□□□□□ -1.04
MBD4-201ENST00000249910 LINC00208Q96KT6 92 aa8.57□□□□□ -1.04
MBD4-201ENST00000249910 PLA2G1BP04054 148 aaKnown RBP8.55□□□□□ -1.04
MBD4-201ENST00000249910 MP68P56378 58 aa8.54□□□□□ -1.04
MBD4-201ENST00000249910 H0Y9P7 68 aa8.53□□□□□ -1.04
MBD4-201ENST00000249910 PRAC1Q96KF2 57 aa8.53□□□□□ -1.04
MBD4-201ENST00000249910 A0A1B0GVY2 172 aa8.52□□□□□ -1.05
MBD4-201ENST00000249910 ASB16-AS1Q495Z4 193 aa8.52□□□□□ -1.05
MBD4-201ENST00000249910 RYR3Q15413 4870 aa8.5□□□□□ -1.05
MBD4-201ENST00000249910 SPANXA2-OT1Q8N9U9 137 aa8.48□□□□□ -1.05
MBD4-201ENST00000249910 MRPL34Q9BQ48 92 aaKnown RBP8.47□□□□□ -1.05
MBD4-201ENST00000249910 TYMSOSQ8TAI1 123 aa8.46□□□□□ -1.06
MBD4-201ENST00000249910 ADM2Q7Z4H4 148 aa8.41□□□□□ -1.06
MBD4-201ENST00000249910 TP53AIP1Q9HCN2 124 aa8.41□□□□□ -1.06
MBD4-201ENST00000249910 LINC01558Q9Y6Z2 57 aa8.4□□□□□ -1.06
MBD4-201ENST00000249910 PCOTHQ58A44 107 aa8.4□□□□□ -1.07
MBD4-201ENST00000249910 Q5W150 140 aa8.39□□□□□ -1.07
MBD4-201ENST00000249910 H3BPC8 53 aa8.37□□□□□ -1.07
MBD4-201ENST00000249910 SPINK7P58062 85 aa8.37□□□□□ -1.07
MBD4-201ENST00000249910 KRTAP10-4P60372 401 aaPredicted RBP8.37□□□□□ -1.07
MBD4-201ENST00000249910 LRP1Q07954 4544 aaKnown RBP8.37□□□□□ -1.07
MBD4-201ENST00000249910 COA5Q86WW8 74 aa8.36□□□□□ -1.07
MBD4-201ENST00000249910 RETNLBQ9BQ08 111 aa8.35□□□□□ -1.07
MBD4-201ENST00000249910 SPINK1P00995 79 aa8.34□□□□□ -1.07
MBD4-201ENST00000249910 LINC00304Q8N9R0 145 aa8.32□□□□□ -1.08
MBD4-201ENST00000249910 HSPG2P98160 4391 aa8.31□□□□□ -1.08
MBD4-201ENST00000249910 J3QL48 77 aa8.3□□□□□ -1.08
MBD4-201ENST00000249910 PKHD1L1Q86WI1 4243 aa8.3□□□□□ -1.08
MBD4-201ENST00000249910 KRTAP13-3Q3SY46 172 aa8.28□□□□□ -1.08
MBD4-201ENST00000249910 SPAG11AQ6PDA7 123 aa8.28□□□□□ -1.08
MBD4-201ENST00000249910 FLG2Q5D862 2391 aaPredicted RBP8.28□□□□□ -1.08
MBD4-201ENST00000249910 KIAA1109Q2LD37 5005 aa8.27□□□□□ -1.09
MBD4-201ENST00000249910 KRTAP16-1A8MUX0 517 aa8.27□□□□□ -1.09
MBD4-201ENST00000249910 IGLV7-46A0A075B6I9 117 aa8.24□□□□□ -1.09
MBD4-201ENST00000249910 DMBT1Q9UGM3 2413 aaPredicted RBP8.23□□□□□ -1.09
MBD4-201ENST00000249910 MYCBP2O75592 4640 aa8.22□□□□□ -1.09
MBD4-201ENST00000249910 RYR1P21817 5038 aa8.22□□□□□ -1.09
MBD4-201ENST00000249910 EPPK1P58107 5090 aaKnown RBP8.21□□□□□ -1.1
MBD4-201ENST00000249910 FAM229AH3BQW9 127 aa8.19□□□□□ -1.1
MBD4-201ENST00000249910 A0A0A0MQY5 61 aa8.18□□□□□ -1.1
MBD4-201ENST00000249910 CSAG1Q6PB30 78 aa8.18□□□□□ -1.1
MBD4-201ENST00000249910 TNXBP22105 4242 aa8.18□□□□□ -1.1
MBD4-201ENST00000249910 C9orf92A6NGG3 77 aa8.17□□□□□ -1.1
MBD4-201ENST00000249910 KRTAP17-1Q9BYP8 105 aa8.17□□□□□ -1.1
MBD4-201ENST00000249910 RPS29P62273 56 aaKnown RBP8.16□□□□□ -1.1
MBD4-201ENST00000249910 Q5VSD8 79 aa8.15□□□□□ -1.1
MBD4-201ENST00000249910 IGKV2D-30A0A075B6S6 120 aa8.13□□□□□ -1.11
MBD4-201ENST00000249910 IGKV2-30P06310 120 aa8.13□□□□□ -1.11
MBD4-201ENST00000249910 HRES1P13985 223 aa8.12□□□□□ -1.11
MBD4-201ENST00000249910 Q8N1X5 172 aa8.12□□□□□ -1.11
MBD4-201ENST00000249910 FAT3Q8TDW7 4589 aa8.1□□□□□ -1.11
MBD4-201ENST00000249910 ROMO1P60602 79 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms