RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 CELSR2Q9HCU4 2923 aa9.46□□□□□ -0.89
SIN3B-201ENST00000248054 CELSR1Q9NYQ6 3014 aa9.44□□□□□ -0.9
SIN3B-201ENST00000248054 PANO1I0J062 215 aa9.44□□□□□ -0.9
SIN3B-201ENST00000248054 A0A1B0GU33 70 aa9.44□□□□□ -0.9
SIN3B-201ENST00000248054 CSAG1Q6PB30 78 aa9.4□□□□□ -0.9
SIN3B-201ENST00000248054 COX6B2Q6YFQ2 88 aa9.4□□□□□ -0.9
SIN3B-201ENST00000248054 NIPBLQ6KC79 2804 aaeCLIP9.4□□□□□ -0.9
SIN3B-201ENST00000248054 KRTAP29-1A8MX34 341 aaPredicted RBP9.4□□□□□ -0.91
SIN3B-201ENST00000248054 Q5W150 140 aa9.39□□□□□ -0.91
SIN3B-201ENST00000248054 KRTAP7-1Q8IUC3 87 aa9.38□□□□□ -0.91
SIN3B-201ENST00000248054 FBN2P35556 2912 aa9.36□□□□□ -0.91
SIN3B-201ENST00000248054 DMAC1Q96GE9 116 aa9.34□□□□□ -0.91
SIN3B-201ENST00000248054 NBEAL1Q6ZS30 2694 aa9.33□□□□□ -0.92
SIN3B-201ENST00000248054 ADM2Q7Z4H4 148 aa9.32□□□□□ -0.92
SIN3B-201ENST00000248054 A0A0D9SG42 100 aa9.32□□□□□ -0.92
SIN3B-201ENST00000248054 MXRA5Q9NR99 2828 aa9.3□□□□□ -0.92
SIN3B-201ENST00000248054 KRTAP13-1Q8IUC0 172 aa9.29□□□□□ -0.92
SIN3B-201ENST00000248054 ASB16-AS1Q495Z4 193 aa9.29□□□□□ -0.92
SIN3B-201ENST00000248054 KRTAP11-1Q8IUC1 163 aa9.28□□□□□ -0.92
SIN3B-201ENST00000248054 CSMD2Q7Z408 3487 aa9.25□□□□□ -0.93
SIN3B-201ENST00000248054 Q6ZSA8 131 aa9.25□□□□□ -0.93
SIN3B-201ENST00000248054 NF1P21359 2839 aa9.25□□□□□ -0.93
SIN3B-201ENST00000248054 Q5VSD8 79 aa9.24□□□□□ -0.93
SIN3B-201ENST00000248054 RPS29P62273 56 aaKnown RBP9.23□□□□□ -0.93
SIN3B-201ENST00000248054 VPS13CQ709C8 3753 aa9.21□□□□□ -0.93
SIN3B-201ENST00000248054 LUZP6Q538Z0 58 aa9.18□□□□□ -0.94
SIN3B-201ENST00000248054 A0A087X002 238 aa9.18□□□□□ -0.94
SIN3B-201ENST00000248054 TENM4Q6N022 2769 aa9.17□□□□□ -0.94
SIN3B-201ENST00000248054 S4R3F8 94 aa9.17□□□□□ -0.94
SIN3B-201ENST00000248054 PDZD2O15018 2839 aa9.13□□□□□ -0.95
SIN3B-201ENST00000248054 SPATA8Q6RVD6 105 aa9.12□□□□□ -0.95
SIN3B-201ENST00000248054 ZFHX3Q15911 3703 aa9.08□□□□□ -0.96
SIN3B-201ENST00000248054 STAB2Q8WWQ8 2551 aa9.08□□□□□ -0.96
SIN3B-201ENST00000248054 RPL37P61927 97 aaKnown RBP9.06□□□□□ -0.96
SIN3B-201ENST00000248054 CAMK2N1Q7Z7J9 78 aa9.06□□□□□ -0.96
SIN3B-201ENST00000248054 H1FX-AS1Q4G0G2 97 aa9.05□□□□□ -0.96
SIN3B-201ENST00000248054 KRTAP13-2Q52LG2 175 aa9.04□□□□□ -0.96
SIN3B-201ENST00000248054 ROMO1P60602 79 aa9.02□□□□□ -0.97
SIN3B-201ENST00000248054 NOTCH2NLQ7Z3S9 236 aa9□□□□□ -0.97
SIN3B-201ENST00000248054 SEC61BP60468 96 aaKnown RBP9□□□□□ -0.97
SIN3B-201ENST00000248054 NBPF19A0A087WUL8 3843 aa8.98□□□□□ -0.97
SIN3B-201ENST00000248054 R4GN34 69 aa8.93□□□□□ -0.98
SIN3B-201ENST00000248054 CUBNO60494 3623 aa8.93□□□□□ -0.98
SIN3B-201ENST00000248054 KRTAP25-1Q3LHN0 102 aa8.9□□□□□ -0.98
SIN3B-201ENST00000248054 ZNF469Q96JG9 3925 aaPredicted RBP8.88□□□□□ -0.99
SIN3B-201ENST00000248054 OTOGQ6ZRI0 2925 aa8.85□□□□□ -0.99
SIN3B-201ENST00000248054 A0A0A0MQY5 61 aa8.82□□□□□ -1
SIN3B-201ENST00000248054 KRTAP1-4P0C5Y4 121 aa8.8□□□□□ -1
SIN3B-201ENST00000248054 TENM1Q9UKZ4 2725 aa8.79□□□□□ -1
SIN3B-201ENST00000248054 VWFP04275 2813 aa8.78□□□□□ -1
SIN3B-201ENST00000248054 ANK3Q12955 4377 aaKnown RBP8.78□□□□□ -1
SIN3B-201ENST00000248054 TENM3Q9P273 2699 aa8.77□□□□□ -1
SIN3B-201ENST00000248054 FLG2Q5D862 2391 aaPredicted RBP8.76□□□□□ -1.01
SIN3B-201ENST00000248054 M0QZ58 72 aa8.76□□□□□ -1.01
SIN3B-201ENST00000248054 A8MUU9 505 aa8.72□□□□□ -1.01
SIN3B-201ENST00000248054 M0R2T5 61 aa8.72□□□□□ -1.01
SIN3B-201ENST00000248054 C20orf166-AS1Q96NR2 134 aa8.71□□□□□ -1.02
SIN3B-201ENST00000248054 AKAP9Q99996 3911 aa8.66□□□□□ -1.02
SIN3B-201ENST00000248054 DMBT1Q9UGM3 2413 aaPredicted RBP8.65□□□□□ -1.02
SIN3B-201ENST00000248054 NDUFAF8A1L188 74 aa8.62□□□□□ -1.03
SIN3B-201ENST00000248054 KRTAP16-1A8MUX0 517 aa8.61□□□□□ -1.03
SIN3B-201ENST00000248054 A0A1B0GVY2 172 aa8.56□□□□□ -1.04
SIN3B-201ENST00000248054 TRRAPQ9Y4A5 3859 aa8.55□□□□□ -1.04
SIN3B-201ENST00000248054 PLAC4Q8WY50 150 aa8.51□□□□□ -1.05
SIN3B-201ENST00000248054 H0YAA0 97 aa8.48□□□□□ -1.05
SIN3B-201ENST00000248054 FBN1P35555 2871 aaKnown RBP8.47□□□□□ -1.05
SIN3B-201ENST00000248054 TENM2Q9NT68 2774 aa8.45□□□□□ -1.06
SIN3B-201ENST00000248054 PKD1L1Q8TDX9 2849 aa8.45□□□□□ -1.06
SIN3B-201ENST00000248054 XP32Q5T750 250 aa8.44□□□□□ -1.06
SIN3B-201ENST00000248054 KRTAP13-3Q3SY46 172 aa8.42□□□□□ -1.06
SIN3B-201ENST00000248054 TPRXLQ17RH7 258 aa8.41□□□□□ -1.06
SIN3B-201ENST00000248054 KRTAP10-8P60410 259 aa8.36□□□□□ -1.07
SIN3B-201ENST00000248054 TGP01266 2768 aa8.29□□□□□ -1.08
SIN3B-201ENST00000248054 C10orf95Q9H7T3 257 aa8.29□□□□□ -1.08
SIN3B-201ENST00000248054 PP632Q6XCG6 107 aa8.25□□□□□ -1.09
SIN3B-201ENST00000248054 TNP1P09430 55 aa8.22□□□□□ -1.09
SIN3B-201ENST00000248054 SRRM2Q9UQ35 2752 aaKnown RBP8.2□□□□□ -1.1
SIN3B-201ENST00000248054 P0C880 135 aa8.19□□□□□ -1.1
SIN3B-201ENST00000248054 HUWE1Q7Z6Z7 4374 aaKnown RBP8.1□□□□□ -1.11
SIN3B-201ENST00000248054 FBN3Q75N90 2809 aa7.95□□□□□ -1.14
SIN3B-201ENST00000248054 MEGF8Q7Z7M0 2845 aa7.94□□□□□ -1.14
SIN3B-201ENST00000248054 ANK2Q01484 3957 aa7.94□□□□□ -1.14
SIN3B-201ENST00000248054 CMYA5Q8N3K9 4069 aa7.88□□□□□ -1.15
SIN3B-201ENST00000248054 ALMS1Q8TCU4 4167 aa7.87□□□□□ -1.15
SIN3B-201ENST00000248054 KRTAP10-4P60372 401 aaPredicted RBP7.87□□□□□ -1.15
SIN3B-201ENST00000248054 COL7A1Q02388 2944 aa7.86□□□□□ -1.15
SIN3B-201ENST00000248054 DNAH9Q9NYC9 4486 aa7.85□□□□□ -1.15
SIN3B-201ENST00000248054 DNAH3Q8TD57 4116 aa7.81□□□□□ -1.16
SIN3B-201ENST00000248054 KRTAP3-1Q9BYR8 98 aa7.81□□□□□ -1.16
SIN3B-201ENST00000248054 KRTAP15-1Q3LI76 137 aa7.79□□□□□ -1.16
SIN3B-201ENST00000248054 MT1HL1P0DM35 61 aa7.79□□□□□ -1.16
SIN3B-201ENST00000248054 KRTAP12-2P59991 146 aa7.75□□□□□ -1.17
SIN3B-201ENST00000248054 CSMD3Q7Z407 3707 aa7.72□□□□□ -1.17
SIN3B-201ENST00000248054 KRTAP13-4Q3LI77 160 aa7.7□□□□□ -1.18
SIN3B-201ENST00000248054 DNAH10Q8IVF4 4471 aa7.68□□□□□ -1.18
SIN3B-201ENST00000248054 PLECQ15149 4684 aaKnown RBP7.67□□□□□ -1.18
SIN3B-201ENST00000248054 KRTAP10-10P60014 251 aa7.64□□□□□ -1.19
SIN3B-201ENST00000248054 PRO2289Q9P1D8 64 aa7.63□□□□□ -1.19
SIN3B-201ENST00000248054 KRTAP10-6P60371 365 aaPredicted RBP7.62□□□□□ -1.19
SIN3B-201ENST00000248054 LYSTQ99698 3801 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms