RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 LINC00483Q53H64 154 aa10.06□□□□□ -0.8
CDKN1A-201ENST00000244741 FLG2Q5D862 2391 aaPredicted RBP10.06□□□□□ -0.8
CDKN1A-201ENST00000244741 SPINK6Q6UWN8 80 aa10.04□□□□□ -0.8
CDKN1A-201ENST00000244741 CASC2Q6XLA1 102 aa10.04□□□□□ -0.8
CDKN1A-201ENST00000244741 HERC2O95714 4834 aa10.03□□□□□ -0.8
CDKN1A-201ENST00000244741 LRP1Q07954 4544 aaKnown RBP10.02□□□□□ -0.8
CDKN1A-201ENST00000244741 PKHD1L1Q86WI1 4243 aa10.02□□□□□ -0.81
CDKN1A-201ENST00000244741 SMIM26A0A096LP01 95 aa10.02□□□□□ -0.81
CDKN1A-201ENST00000244741 FP248Q71RG6 208 aaPredicted RBP10.02□□□□□ -0.81
CDKN1A-201ENST00000244741 MYCBP2O75592 4640 aa10.02□□□□□ -0.81
CDKN1A-201ENST00000244741 HRCT1Q6UXD1 115 aa10.01□□□□□ -0.81
CDKN1A-201ENST00000244741 ZNF706Q9Y5V0 76 aaPredicted RBP10□□□□□ -0.81
CDKN1A-201ENST00000244741 Q96NJ1 140 aa9.99□□□□□ -0.81
CDKN1A-201ENST00000244741 KRTAP1-4P0C5Y4 121 aa9.98□□□□□ -0.81
CDKN1A-201ENST00000244741 FAM229BQ4G0N7 80 aa9.98□□□□□ -0.81
CDKN1A-201ENST00000244741 MOBPQ13875 183 aa9.98□□□□□ -0.81
CDKN1A-201ENST00000244741 ABCA13Q86UQ4 5058 aa9.97□□□□□ -0.81
CDKN1A-201ENST00000244741 A0A087X002 238 aa9.97□□□□□ -0.81
CDKN1A-201ENST00000244741 MMP24-AS1A0A0U1RRL7 71 aa9.96□□□□□ -0.82
CDKN1A-201ENST00000244741 MP68P56378 58 aa9.96□□□□□ -0.82
CDKN1A-201ENST00000244741 LINC00208Q96KT6 92 aa9.94□□□□□ -0.82
CDKN1A-201ENST00000244741 NDUFB1O75438 58 aa9.94□□□□□ -0.82
CDKN1A-201ENST00000244741 H0Y9P7 68 aa9.92□□□□□ -0.82
CDKN1A-201ENST00000244741 PRR26Q8N8Z3 221 aa9.92□□□□□ -0.82
CDKN1A-201ENST00000244741 TRAV22A0A0B4J277 110 aa9.91□□□□□ -0.82
CDKN1A-201ENST00000244741 hDV103S1A0JD37 113 aa9.91□□□□□ -0.82
CDKN1A-201ENST00000244741 FAT3Q8TDW7 4589 aa9.9□□□□□ -0.82
CDKN1A-201ENST00000244741 KRTAP13-2Q52LG2 175 aa9.9□□□□□ -0.82
CDKN1A-201ENST00000244741 PRR4Q16378 134 aa9.9□□□□□ -0.83
CDKN1A-201ENST00000244741 C1orf64Q8NEQ6 169 aa9.89□□□□□ -0.83
CDKN1A-201ENST00000244741 ASB16-AS1Q495Z4 193 aa9.87□□□□□ -0.83
CDKN1A-201ENST00000244741 H3BPC8 53 aa9.86□□□□□ -0.83
CDKN1A-201ENST00000244741 CYP4F30PQ9H0H9 118 aa9.86□□□□□ -0.83
CDKN1A-201ENST00000244741 C8orf17Q9NRJ1 99 aa9.86□□□□□ -0.83
CDKN1A-201ENST00000244741 MPLKIPQ8TAP9 179 aa9.85□□□□□ -0.83
CDKN1A-201ENST00000244741 TNXBP22105 4242 aa9.85□□□□□ -0.83
CDKN1A-201ENST00000244741 IGHV6-1A0A0B4J1U7 121 aa9.84□□□□□ -0.83
CDKN1A-201ENST00000244741 A0A1B0GVX0 72 aa9.84□□□□□ -0.83
CDKN1A-201ENST00000244741 TYMSOSQ8TAI1 123 aa9.82□□□□□ -0.84
CDKN1A-201ENST00000244741 NOTCH2NLQ7Z3S9 236 aa9.8□□□□□ -0.84
CDKN1A-201ENST00000244741 PCLOQ9Y6V0 5065 aa9.78□□□□□ -0.84
CDKN1A-201ENST00000244741 TP53AIP1Q9HCN2 124 aa9.78□□□□□ -0.84
CDKN1A-201ENST00000244741 SPANXA2-OT1Q8N9U9 137 aa9.77□□□□□ -0.85
CDKN1A-201ENST00000244741 DMBT1Q9UGM3 2413 aaPredicted RBP9.75□□□□□ -0.85
CDKN1A-201ENST00000244741 NDUFS5O43920 106 aa9.74□□□□□ -0.85
CDKN1A-201ENST00000244741 SSBP3-AS1Q7Z2R9 100 aa9.74□□□□□ -0.85
CDKN1A-201ENST00000244741 MRPL34Q9BQ48 92 aaKnown RBP9.74□□□□□ -0.85
CDKN1A-201ENST00000244741 KRTAP10-8P60410 259 aa9.73□□□□□ -0.85
CDKN1A-201ENST00000244741 MT1HL1P0DM35 61 aa9.72□□□□□ -0.85
CDKN1A-201ENST00000244741 CD164Q04900 197 aa9.72□□□□□ -0.85
CDKN1A-201ENST00000244741 Q1T7F1 81 aa9.7□□□□□ -0.86
CDKN1A-201ENST00000244741 LINC00304Q8N9R0 145 aa9.7□□□□□ -0.86
CDKN1A-201ENST00000244741 PCOTHQ58A44 107 aa9.69□□□□□ -0.86
CDKN1A-201ENST00000244741 IGLV7-46A0A075B6I9 117 aa9.67□□□□□ -0.86
CDKN1A-201ENST00000244741 C4orf48Q5BLP8 95 aa9.67□□□□□ -0.86
CDKN1A-201ENST00000244741 PRO0628Q9UI54 55 aa9.64□□□□□ -0.87
CDKN1A-201ENST00000244741 J3QL48 77 aa9.63□□□□□ -0.87
CDKN1A-201ENST00000244741 Q5W150 140 aa9.61□□□□□ -0.87
CDKN1A-201ENST00000244741 BRK1Q8WUW1 75 aa9.61□□□□□ -0.87
CDKN1A-201ENST00000244741 PSPHP1O15172 72 aa9.59□□□□□ -0.87
CDKN1A-201ENST00000244741 SPINK1P00995 79 aa9.59□□□□□ -0.87
CDKN1A-201ENST00000244741 KRTAP13-3Q3SY46 172 aa9.58□□□□□ -0.88
CDKN1A-201ENST00000244741 COA5Q86WW8 74 aa9.58□□□□□ -0.88
CDKN1A-201ENST00000244741 C8orf87E5RJ46 101 aa9.57□□□□□ -0.88
CDKN1A-201ENST00000244741 SPAG11AQ6PDA7 123 aa9.57□□□□□ -0.88
CDKN1A-201ENST00000244741 C1orf195Q5TG92 126 aa9.57□□□□□ -0.88
CDKN1A-201ENST00000244741 RETNLBQ9BQ08 111 aa9.57□□□□□ -0.88
CDKN1A-201ENST00000244741 Q8N9P0 234 aaPredicted RBP9.56□□□□□ -0.88
CDKN1A-201ENST00000244741 LOC101927531A0A1B0GV80 90 aa9.53□□□□□ -0.88
CDKN1A-201ENST00000244741 LINC00313P59037 77 aa9.53□□□□□ -0.88
CDKN1A-201ENST00000244741 V9GYY9 64 aa9.53□□□□□ -0.88
CDKN1A-201ENST00000244741 A8MUN3 132 aa9.53□□□□□ -0.88
CDKN1A-201ENST00000244741 HERC1Q15751 4861 aa9.52□□□□□ -0.89
CDKN1A-201ENST00000244741 LIMD2Q9BT23 127 aa9.51□□□□□ -0.89
CDKN1A-201ENST00000244741 HRES1P13985 223 aa9.47□□□□□ -0.89
CDKN1A-201ENST00000244741 RPS29P62273 56 aaKnown RBP9.47□□□□□ -0.89
CDKN1A-201ENST00000244741 Q5VV11 94 aa9.46□□□□□ -0.89
CDKN1A-201ENST00000244741 KRTAP16-1A8MUX0 517 aa9.44□□□□□ -0.9
CDKN1A-201ENST00000244741 PRR15LQ9BU68 103 aa9.42□□□□□ -0.9
CDKN1A-201ENST00000244741 CHKB-CPT1BH3BT56 60 aa9.36□□□□□ -0.91
CDKN1A-201ENST00000244741 IGKV2-30P06310 120 aa9.35□□□□□ -0.91
CDKN1A-201ENST00000244741 LPAP08519 4548 aa9.35□□□□□ -0.91
CDKN1A-201ENST00000244741 LINC01558Q9Y6Z2 57 aa9.33□□□□□ -0.92
CDKN1A-201ENST00000244741 A8MU10 97 aa9.32□□□□□ -0.92
CDKN1A-201ENST00000244741 Q75L30 129 aa9.32□□□□□ -0.92
CDKN1A-201ENST00000244741 ACYP2P14621 99 aa9.31□□□□□ -0.92
CDKN1A-201ENST00000244741 C9orf92A6NGG3 77 aa9.3□□□□□ -0.92
CDKN1A-201ENST00000244741 DMAC1Q96GE9 116 aa9.29□□□□□ -0.92
CDKN1A-201ENST00000244741 IGKV2D-30A0A075B6S6 120 aa9.25□□□□□ -0.93
CDKN1A-201ENST00000244741 HMCN2Q8NDA2 5059 aa9.23□□□□□ -0.93
CDKN1A-201ENST00000244741 A6NED7 52 aa9.23□□□□□ -0.93
CDKN1A-201ENST00000244741 LCA10Q71F78 164 aa9.22□□□□□ -0.93
CDKN1A-201ENST00000244741 LRP2P98164 4655 aa9.21□□□□□ -0.93
CDKN1A-201ENST00000244741 SPINK7P58062 85 aa9.15□□□□□ -0.94
CDKN1A-201ENST00000244741 TPRXLQ17RH7 258 aa9.13□□□□□ -0.95
CDKN1A-201ENST00000244741 CDC42SE1Q9NRR8 79 aa9.12□□□□□ -0.95
CDKN1A-201ENST00000244741 C7orf65Q6ZTY9 151 aa9.11□□□□□ -0.95
CDKN1A-201ENST00000244741 XP32Q5T750 250 aa9.1□□□□□ -0.95
CDKN1A-201ENST00000244741 SPTSSBQ8NFR3 76 aa9.09□□□□□ -0.95
CDKN1A-201ENST00000244741 PMAIP1Q13794 54 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms