RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 C8orf87E5RJ46 101 aa5.67□□□□□ -1.5
COL21A1-201ENST00000244728 TGP01266 2768 aa5.67□□□□□ -1.5
COL21A1-201ENST00000244728 KRTAP29-1A8MX34 341 aaPredicted RBP5.67□□□□□ -1.5
COL21A1-201ENST00000244728 PANO1I0J062 215 aa5.65□□□□□ -1.5
COL21A1-201ENST00000244728 TENM2Q9NT68 2774 aa5.65□□□□□ -1.5
COL21A1-201ENST00000244728 KRTAP7-1Q8IUC3 87 aa5.65□□□□□ -1.51
COL21A1-201ENST00000244728 LINC01558Q9Y6Z2 57 aa5.65□□□□□ -1.51
COL21A1-201ENST00000244728 SPRR1BP22528 89 aa5.65□□□□□ -1.51
COL21A1-201ENST00000244728 LCA10Q71F78 164 aa5.65□□□□□ -1.51
COL21A1-201ENST00000244728 UQCR11O14957 56 aa5.64□□□□□ -1.51
COL21A1-201ENST00000244728 A8MU10 97 aa5.63□□□□□ -1.51
COL21A1-201ENST00000244728 HRES1P13985 223 aa5.63□□□□□ -1.51
COL21A1-201ENST00000244728 SPINK7P58062 85 aa5.62□□□□□ -1.51
COL21A1-201ENST00000244728 MIR22HGQ0VDD5 57 aa5.62□□□□□ -1.51
COL21A1-201ENST00000244728 AKAP9Q99996 3911 aa5.61□□□□□ -1.51
COL21A1-201ENST00000244728 Q8N1X5 172 aa5.61□□□□□ -1.51
COL21A1-201ENST00000244728 KRTAP10-2P60368 255 aa5.6□□□□□ -1.51
COL21A1-201ENST00000244728 J3QL48 77 aa5.6□□□□□ -1.51
COL21A1-201ENST00000244728 PLAC8Q9NZF1 115 aa5.58□□□□□ -1.52
COL21A1-201ENST00000244728 PRAC1Q96KF2 57 aa5.57□□□□□ -1.52
COL21A1-201ENST00000244728 KRTAP11-1Q8IUC1 163 aa5.57□□□□□ -1.52
COL21A1-201ENST00000244728 KRTAP10-1P60331 282 aa5.55□□□□□ -1.52
COL21A1-201ENST00000244728 Q6ZR54 194 aa5.52□□□□□ -1.53
COL21A1-201ENST00000244728 A0A087X002 238 aa5.51□□□□□ -1.53
COL21A1-201ENST00000244728 NOTCH2NLQ7Z3S9 236 aa5.51□□□□□ -1.53
COL21A1-201ENST00000244728 ZNF469Q96JG9 3925 aaPredicted RBP5.51□□□□□ -1.53
COL21A1-201ENST00000244728 Q5W150 140 aa5.49□□□□□ -1.53
COL21A1-201ENST00000244728 A6NN06 94 aa5.48□□□□□ -1.53
COL21A1-201ENST00000244728 COX6B2Q6YFQ2 88 aa5.47□□□□□ -1.53
COL21A1-201ENST00000244728 LINC01554Q52M75 96 aa5.46□□□□□ -1.53
COL21A1-201ENST00000244728 LINC00483Q53H64 154 aa5.45□□□□□ -1.54
COL21A1-201ENST00000244728 Q6ZRN7 208 aaPredicted RBP5.44□□□□□ -1.54
COL21A1-201ENST00000244728 A0A0D9SG42 100 aa5.43□□□□□ -1.54
COL21A1-201ENST00000244728 DMAC1Q96GE9 116 aa5.43□□□□□ -1.54
COL21A1-201ENST00000244728 CSAG1Q6PB30 78 aa5.4□□□□□ -1.54
COL21A1-201ENST00000244728 KRTAP13-1Q8IUC0 172 aa5.4□□□□□ -1.55
COL21A1-201ENST00000244728 ADM2Q7Z4H4 148 aa5.37□□□□□ -1.55
COL21A1-201ENST00000244728 Q5VSD8 79 aa5.36□□□□□ -1.55
COL21A1-201ENST00000244728 Q6ZSA8 131 aa5.36□□□□□ -1.55
COL21A1-201ENST00000244728 FBN3Q75N90 2809 aa5.35□□□□□ -1.55
COL21A1-201ENST00000244728 SPINT4Q6UDR6 99 aa5.35□□□□□ -1.55
COL21A1-201ENST00000244728 TRRAPQ9Y4A5 3859 aa5.34□□□□□ -1.55
COL21A1-201ENST00000244728 A0A1B0GU33 70 aa5.34□□□□□ -1.55
COL21A1-201ENST00000244728 SPATA8Q6RVD6 105 aa5.34□□□□□ -1.56
COL21A1-201ENST00000244728 H3BS24 57 aa5.33□□□□□ -1.56
COL21A1-201ENST00000244728 COL7A1Q02388 2944 aa5.31□□□□□ -1.56
COL21A1-201ENST00000244728 ASB16-AS1Q495Z4 193 aa5.3□□□□□ -1.56
COL21A1-201ENST00000244728 KRTAP13-2Q52LG2 175 aa5.28□□□□□ -1.56
COL21A1-201ENST00000244728 CRIPTQ9P021 101 aa5.28□□□□□ -1.56
COL21A1-201ENST00000244728 CSMD3Q7Z407 3707 aa5.2□□□□□ -1.58
COL21A1-201ENST00000244728 M0R2T5 61 aa5.19□□□□□ -1.58
COL21A1-201ENST00000244728 H1FX-AS1Q4G0G2 97 aa5.18□□□□□ -1.58
COL21A1-201ENST00000244728 MEGF8Q7Z7M0 2845 aa5.17□□□□□ -1.58
COL21A1-201ENST00000244728 S4R3F8 94 aa5.17□□□□□ -1.58
COL21A1-201ENST00000244728 ANK3Q12955 4377 aaKnown RBP5.16□□□□□ -1.58
COL21A1-201ENST00000244728 CAMK2N1Q7Z7J9 78 aa5.13□□□□□ -1.59
COL21A1-201ENST00000244728 KRTAP13-3Q3SY46 172 aa5.12□□□□□ -1.59
COL21A1-201ENST00000244728 KRTAP25-1Q3LHN0 102 aa5.12□□□□□ -1.59
COL21A1-201ENST00000244728 R4GN34 69 aa5.1□□□□□ -1.59
COL21A1-201ENST00000244728 SEC61BP60468 96 aaKnown RBP5.1□□□□□ -1.59
COL21A1-201ENST00000244728 RPL37P61927 97 aaKnown RBP5.1□□□□□ -1.59
COL21A1-201ENST00000244728 ROMO1P60602 79 aa5.09□□□□□ -1.59
COL21A1-201ENST00000244728 KRTAP1-4P0C5Y4 121 aa5.07□□□□□ -1.6
COL21A1-201ENST00000244728 ANK2Q01484 3957 aa5.07□□□□□ -1.6
COL21A1-201ENST00000244728 KRTAP16-1A8MUX0 517 aa5.06□□□□□ -1.6
COL21A1-201ENST00000244728 KRTAP21-3Q3LHN1 58 aa5.05□□□□□ -1.6
COL21A1-201ENST00000244728 M0QZ58 72 aa5.03□□□□□ -1.6
COL21A1-201ENST00000244728 H0YAA0 97 aa5.03□□□□□ -1.6
COL21A1-201ENST00000244728 A8MUU9 505 aa5.01□□□□□ -1.61
COL21A1-201ENST00000244728 RPS29P62273 56 aaKnown RBP5□□□□□ -1.61
COL21A1-201ENST00000244728 C20orf166-AS1Q96NR2 134 aa4.95□□□□□ -1.62
COL21A1-201ENST00000244728 LYSTQ99698 3801 aa4.88□□□□□ -1.63
COL21A1-201ENST00000244728 NDUFAF8A1L188 74 aa4.88□□□□□ -1.63
COL21A1-201ENST00000244728 XP32Q5T750 250 aa4.88□□□□□ -1.63
COL21A1-201ENST00000244728 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
COL21A1-201ENST00000244728 LUZP6Q538Z0 58 aa4.85□□□□□ -1.63
COL21A1-201ENST00000244728 KRTAP3-1Q9BYR8 98 aa4.79□□□□□ -1.64
COL21A1-201ENST00000244728 A0A1B0GVY2 172 aa4.79□□□□□ -1.64
COL21A1-201ENST00000244728 HUWE1Q7Z6Z7 4374 aaKnown RBP4.79□□□□□ -1.64
COL21A1-201ENST00000244728 CMYA5Q8N3K9 4069 aa4.76□□□□□ -1.65
COL21A1-201ENST00000244728 P0C880 135 aa4.76□□□□□ -1.65
COL21A1-201ENST00000244728 PLAC4Q8WY50 150 aa4.76□□□□□ -1.65
COL21A1-201ENST00000244728 KRTAP10-8P60410 259 aa4.74□□□□□ -1.65
COL21A1-201ENST00000244728 DNAH10Q8IVF4 4471 aa4.74□□□□□ -1.65
COL21A1-201ENST00000244728 TPRXLQ17RH7 258 aa4.7□□□□□ -1.66
COL21A1-201ENST00000244728 A0A0A0MQY5 61 aa4.68□□□□□ -1.66
COL21A1-201ENST00000244728 DNHD1Q96M86 4753 aa4.67□□□□□ -1.66
COL21A1-201ENST00000244728 DNAH7Q8WXX0 4024 aa4.65□□□□□ -1.66
COL21A1-201ENST00000244728 KRTAP13-4Q3LI77 160 aa4.65□□□□□ -1.67
COL21A1-201ENST00000244728 KRTAP12-2P59991 146 aa4.64□□□□□ -1.67
COL21A1-201ENST00000244728 KRTAP10-6P60371 365 aaPredicted RBP4.63□□□□□ -1.67
COL21A1-201ENST00000244728 PLECQ15149 4684 aaKnown RBP4.6□□□□□ -1.67
COL21A1-201ENST00000244728 DNAH9Q9NYC9 4486 aa4.58□□□□□ -1.68
COL21A1-201ENST00000244728 KRTAP12-1P59990 96 aa4.57□□□□□ -1.68
COL21A1-201ENST00000244728 TNP1P09430 55 aa4.56□□□□□ -1.68
COL21A1-201ENST00000244728 DNAH1Q9P2D7 4330 aa4.55□□□□□ -1.68
COL21A1-201ENST00000244728 KRTAP10-10P60014 251 aa4.55□□□□□ -1.68
COL21A1-201ENST00000244728 KRTAP3-3Q9BYR6 98 aa4.52□□□□□ -1.69
COL21A1-201ENST00000244728 KRTAP3-2Q9BYR7 98 aa4.52□□□□□ -1.69
COL21A1-201ENST00000244728 DNAH11Q96DT5 4516 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms