RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 MRPL34Q9BQ48 92 aaKnown RBP11.07□□□□□ -0.64
CHPF-201ENST00000243776 FBN3Q75N90 2809 aa11.07□□□□□ -0.64
CHPF-201ENST00000243776 ASB16-AS1Q495Z4 193 aa11.07□□□□□ -0.64
CHPF-201ENST00000243776 Q75L30 129 aa11.06□□□□□ -0.64
CHPF-201ENST00000243776 Q6ZR54 194 aa11.05□□□□□ -0.64
CHPF-201ENST00000243776 RETNLBQ9BQ08 111 aa11.05□□□□□ -0.64
CHPF-201ENST00000243776 Q5W150 140 aa11.05□□□□□ -0.64
CHPF-201ENST00000243776 DNAH17Q9UFH2 4485 aa11.05□□□□□ -0.64
CHPF-201ENST00000243776 PRR26Q8N8Z3 221 aa11.04□□□□□ -0.64
CHPF-201ENST00000243776 LOC101927531A0A1B0GV80 90 aa11.03□□□□□ -0.64
CHPF-201ENST00000243776 CIRBP-AS1Q8TBR5 109 aa11.03□□□□□ -0.64
CHPF-201ENST00000243776 DNAH2Q9P225 4427 aa11.03□□□□□ -0.64
CHPF-201ENST00000243776 SPINK7P58062 85 aa11.02□□□□□ -0.65
CHPF-201ENST00000243776 A0A087WTM6 91 aa11.01□□□□□ -0.65
CHPF-201ENST00000243776 LINC00483Q53H64 154 aa11.01□□□□□ -0.65
CHPF-201ENST00000243776 RTL8CO15255 209 aa11.01□□□□□ -0.65
CHPF-201ENST00000243776 IGLV5-52A0A0A0MRZ9 124 aa11□□□□□ -0.65
CHPF-201ENST00000243776 VPS13DQ5THJ4 4388 aa10.99□□□□□ -0.65
CHPF-201ENST00000243776 ZNF861PO60384 105 aa10.96□□□□□ -0.65
CHPF-201ENST00000243776 ZNF706Q9Y5V0 76 aaPredicted RBP10.96□□□□□ -0.65
CHPF-201ENST00000243776 LINC01558Q9Y6Z2 57 aa10.96□□□□□ -0.66
CHPF-201ENST00000243776 PRKDCP78527 4128 aaKnown RBP10.95□□□□□ -0.66
CHPF-201ENST00000243776 ATP11AUNQ6ZP68 121 aa10.94□□□□□ -0.66
CHPF-201ENST00000243776 CDC42SE1Q9NRR8 79 aa10.92□□□□□ -0.66
CHPF-201ENST00000243776 DNAH6Q9C0G6 4158 aa10.92□□□□□ -0.66
CHPF-201ENST00000243776 NUPR2A6NF83 97 aa10.9□□□□□ -0.66
CHPF-201ENST00000243776 KTN1-AS1Q86SY8 53 aa10.9□□□□□ -0.67
CHPF-201ENST00000243776 PLAC8Q9NZF1 115 aa10.88□□□□□ -0.67
CHPF-201ENST00000243776 A6NN06 94 aa10.87□□□□□ -0.67
CHPF-201ENST00000243776 DNAH11Q96DT5 4516 aa10.85□□□□□ -0.67
CHPF-201ENST00000243776 ALMS1Q8TCU4 4167 aa10.83□□□□□ -0.68
CHPF-201ENST00000243776 RBM12B-AS1Q9P1G2 102 aa10.82□□□□□ -0.68
CHPF-201ENST00000243776 IGLV7-43P04211 117 aa10.82□□□□□ -0.68
CHPF-201ENST00000243776 KRTAP13-3Q3SY46 172 aa10.8□□□□□ -0.68
CHPF-201ENST00000243776 ACYP2P14621 99 aa10.76□□□□□ -0.69
CHPF-201ENST00000243776 LINC00313P59037 77 aa10.74□□□□□ -0.69
CHPF-201ENST00000243776 LRP1BQ9NZR2 4599 aa10.71□□□□□ -0.69
CHPF-201ENST00000243776 DNAH5Q8TE73 4624 aa10.7□□□□□ -0.7
CHPF-201ENST00000243776 C1orf134Q5TEV5 83 aa10.7□□□□□ -0.7
CHPF-201ENST00000243776 LY6G6CO95867 125 aa10.7□□□□□ -0.7
CHPF-201ENST00000243776 IGKV2D-30A0A075B6S6 120 aa10.68□□□□□ -0.7
CHPF-201ENST00000243776 IGKV2-30P06310 120 aa10.68□□□□□ -0.7
CHPF-201ENST00000243776 C7orf65Q6ZTY9 151 aa10.68□□□□□ -0.7
CHPF-201ENST00000243776 PRAC1Q96KF2 57 aa10.68□□□□□ -0.7
CHPF-201ENST00000243776 KRTAP10-2P60368 255 aa10.67□□□□□ -0.7
CHPF-201ENST00000243776 A0A1B0GU69 56 aa10.65□□□□□ -0.71
CHPF-201ENST00000243776 KRTAP13-2Q52LG2 175 aa10.65□□□□□ -0.71
CHPF-201ENST00000243776 DMAC1Q96GE9 116 aa10.65□□□□□ -0.71
CHPF-201ENST00000243776 ADM2Q7Z4H4 148 aa10.64□□□□□ -0.71
CHPF-201ENST00000243776 SSBP3-AS1Q7Z2R9 100 aa10.63□□□□□ -0.71
CHPF-201ENST00000243776 C8orf87E5RJ46 101 aa10.63□□□□□ -0.71
CHPF-201ENST00000243776 FAM229AH3BQW9 127 aa10.62□□□□□ -0.71
CHPF-201ENST00000243776 SPINK1P00995 79 aa10.57□□□□□ -0.72
CHPF-201ENST00000243776 DNHD1Q96M86 4753 aa10.55□□□□□ -0.72
CHPF-201ENST00000243776 VPS13BQ7Z7G8 4022 aa10.55□□□□□ -0.72
CHPF-201ENST00000243776 KRTAP16-1A8MUX0 517 aa10.51□□□□□ -0.73
CHPF-201ENST00000243776 HYDINQ4G0P3 5121 aa10.5□□□□□ -0.73
CHPF-201ENST00000243776 KRTAP10-1P60331 282 aa10.5□□□□□ -0.73
CHPF-201ENST00000243776 FAT2Q9NYQ8 4349 aa10.48□□□□□ -0.73
CHPF-201ENST00000243776 Q8N1X5 172 aa10.48□□□□□ -0.73
CHPF-201ENST00000243776 MIR22HGQ0VDD5 57 aa10.47□□□□□ -0.73
CHPF-201ENST00000243776 PKD1P98161 4303 aa10.43□□□□□ -0.74
CHPF-201ENST00000243776 UQCR11O14957 56 aa10.42□□□□□ -0.74
CHPF-201ENST00000243776 PLA2G1BP04054 148 aaKnown RBP10.42□□□□□ -0.74
CHPF-201ENST00000243776 SPATA8Q6RVD6 105 aa10.42□□□□□ -0.74
CHPF-201ENST00000243776 KRTAP1-4P0C5Y4 121 aa10.41□□□□□ -0.74
CHPF-201ENST00000243776 C4orf48Q5BLP8 95 aa10.4□□□□□ -0.74
CHPF-201ENST00000243776 TYMSOSQ8TAI1 123 aa10.36□□□□□ -0.75
CHPF-201ENST00000243776 PKHD1P08F94 4074 aa10.33□□□□□ -0.76
CHPF-201ENST00000243776 C9orf92A6NGG3 77 aa10.28□□□□□ -0.76
CHPF-201ENST00000243776 Q6ZSA8 131 aa10.28□□□□□ -0.76
CHPF-201ENST00000243776 FLG2Q5D862 2391 aaPredicted RBP10.25□□□□□ -0.77
CHPF-201ENST00000243776 CSAG1Q6PB30 78 aa10.24□□□□□ -0.77
CHPF-201ENST00000243776 SMR3BP02814 79 aaPredicted RBP10.22□□□□□ -0.77
CHPF-201ENST00000243776 FAT1Q14517 4588 aa10.2□□□□□ -0.78
CHPF-201ENST00000243776 LINC01554Q52M75 96 aa10.18□□□□□ -0.78
CHPF-201ENST00000243776 LINC00304Q8N9R0 145 aa10.17□□□□□ -0.78
CHPF-201ENST00000243776 H0YAA0 97 aa10.1□□□□□ -0.79
CHPF-201ENST00000243776 KRTAP3-1Q9BYR8 98 aa10.06□□□□□ -0.8
CHPF-201ENST00000243776 DYNC1H1Q14204 4646 aaKnown RBP10.05□□□□□ -0.8
CHPF-201ENST00000243776 DMBT1Q9UGM3 2413 aaPredicted RBP10.03□□□□□ -0.8
CHPF-201ENST00000243776 SACSQ9NZJ4 4579 aa10.01□□□□□ -0.81
CHPF-201ENST00000243776 CRIPTQ9P021 101 aa10□□□□□ -0.81
CHPF-201ENST00000243776 A0A1B0GU33 70 aa10□□□□□ -0.81
CHPF-201ENST00000243776 A8MUU9 505 aa9.93□□□□□ -0.82
CHPF-201ENST00000243776 H1FX-AS1Q4G0G2 97 aa9.9□□□□□ -0.82
CHPF-201ENST00000243776 C20orf166-AS1Q96NR2 134 aa9.9□□□□□ -0.83
CHPF-201ENST00000243776 MYCBP2O75592 4640 aa9.85□□□□□ -0.83
CHPF-201ENST00000243776 APOBP04114 4563 aaKnown RBP9.83□□□□□ -0.84
CHPF-201ENST00000243776 LRP1Q07954 4544 aaKnown RBP9.83□□□□□ -0.84
CHPF-201ENST00000243776 RPS29P62273 56 aaKnown RBP9.82□□□□□ -0.84
CHPF-201ENST00000243776 PKHD1L1Q86WI1 4243 aa9.81□□□□□ -0.84
CHPF-201ENST00000243776 COX6B2Q6YFQ2 88 aa9.79□□□□□ -0.84
CHPF-201ENST00000243776 KRTAP25-1Q3LHN0 102 aa9.78□□□□□ -0.84
CHPF-201ENST00000243776 HSPG2P98160 4391 aa9.77□□□□□ -0.85
CHPF-201ENST00000243776 A0A0D9SG42 100 aa9.74□□□□□ -0.85
CHPF-201ENST00000243776 H3BS24 57 aa9.73□□□□□ -0.85
CHPF-201ENST00000243776 KRTAP10-4P60372 401 aaPredicted RBP9.7□□□□□ -0.86
CHPF-201ENST00000243776 FAT3Q8TDW7 4589 aa9.66□□□□□ -0.86
CHPF-201ENST00000243776 K7ERS5 55 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms