RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 ZFHX4Q86UP3 3567 aa6.63□□□□□ -1.35
COPA-201ENST00000241704 Q6ZR54 194 aa6.62□□□□□ -1.35
COPA-201ENST00000241704 ADM2Q7Z4H4 148 aa6.62□□□□□ -1.35
COPA-201ENST00000241704 DMDP11532 3685 aa6.62□□□□□ -1.35
COPA-201ENST00000241704 CSMD1Q96PZ7 3565 aa6.61□□□□□ -1.35
COPA-201ENST00000241704 MXRA5Q9NR99 2828 aa6.61□□□□□ -1.35
COPA-201ENST00000241704 LAMA5O15230 3695 aa6.61□□□□□ -1.35
COPA-201ENST00000241704 M0R2T5 61 aa6.6□□□□□ -1.35
COPA-201ENST00000241704 SMG1Q96Q15 3661 aaKnown RBP6.59□□□□□ -1.35
COPA-201ENST00000241704 SPATA8Q6RVD6 105 aa6.57□□□□□ -1.36
COPA-201ENST00000241704 PANO1I0J062 215 aa6.56□□□□□ -1.36
COPA-201ENST00000241704 A0A087X002 238 aa6.55□□□□□ -1.36
COPA-201ENST00000241704 Q8N1X5 172 aa6.55□□□□□ -1.36
COPA-201ENST00000241704 TENM3Q9P273 2699 aa6.54□□□□□ -1.36
COPA-201ENST00000241704 Q6ZRN7 208 aaPredicted RBP6.53□□□□□ -1.36
COPA-201ENST00000241704 SPINT4Q6UDR6 99 aa6.52□□□□□ -1.37
COPA-201ENST00000241704 SEC61BP60468 96 aaKnown RBP6.5□□□□□ -1.37
COPA-201ENST00000241704 DMAC1Q96GE9 116 aa6.5□□□□□ -1.37
COPA-201ENST00000241704 ASPMQ8IZT6 3477 aa6.5□□□□□ -1.37
COPA-201ENST00000241704 LINC00483Q53H64 154 aa6.5□□□□□ -1.37
COPA-201ENST00000241704 KRTAP7-1Q8IUC3 87 aa6.47□□□□□ -1.37
COPA-201ENST00000241704 TENM1Q9UKZ4 2725 aa6.45□□□□□ -1.38
COPA-201ENST00000241704 PDZD2O15018 2839 aa6.45□□□□□ -1.38
COPA-201ENST00000241704 Q5W150 140 aa6.44□□□□□ -1.38
COPA-201ENST00000241704 KRTAP11-1Q8IUC1 163 aa6.44□□□□□ -1.38
COPA-201ENST00000241704 SPENQ96T58 3664 aaKnown RBP6.43□□□□□ -1.38
COPA-201ENST00000241704 KRTAP25-1Q3LHN0 102 aa6.38□□□□□ -1.39
COPA-201ENST00000241704 PKD1L1Q8TDX9 2849 aa6.38□□□□□ -1.39
COPA-201ENST00000241704 TENM2Q9NT68 2774 aa6.37□□□□□ -1.39
COPA-201ENST00000241704 A0A0D9SG42 100 aa6.37□□□□□ -1.39
COPA-201ENST00000241704 NOTCH2NLQ7Z3S9 236 aa6.36□□□□□ -1.39
COPA-201ENST00000241704 A0A1B0GU33 70 aa6.35□□□□□ -1.39
COPA-201ENST00000241704 ROMO1P60602 79 aa6.35□□□□□ -1.39
COPA-201ENST00000241704 KRTAP13-1Q8IUC0 172 aa6.35□□□□□ -1.39
COPA-201ENST00000241704 CELSR1Q9NYQ6 3014 aa6.33□□□□□ -1.4
COPA-201ENST00000241704 SVEP1Q4LDE5 3571 aa6.32□□□□□ -1.4
COPA-201ENST00000241704 ZFHX3Q15911 3703 aa6.32□□□□□ -1.4
COPA-201ENST00000241704 OTOGQ6ZRI0 2925 aa6.31□□□□□ -1.4
COPA-201ENST00000241704 CAMK2N1Q7Z7J9 78 aa6.3□□□□□ -1.4
COPA-201ENST00000241704 CRIPTQ9P021 101 aa6.29□□□□□ -1.4
COPA-201ENST00000241704 S4R3F8 94 aa6.28□□□□□ -1.4
COPA-201ENST00000241704 KRTAP13-2Q52LG2 175 aa6.22□□□□□ -1.41
COPA-201ENST00000241704 NBPF19A0A087WUL8 3843 aa6.22□□□□□ -1.41
COPA-201ENST00000241704 RPS29P62273 56 aaKnown RBP6.22□□□□□ -1.41
COPA-201ENST00000241704 VWFP04275 2813 aa6.22□□□□□ -1.41
COPA-201ENST00000241704 R4GN34 69 aa6.21□□□□□ -1.42
COPA-201ENST00000241704 H1FX-AS1Q4G0G2 97 aa6.2□□□□□ -1.42
COPA-201ENST00000241704 A8MUU9 505 aa6.19□□□□□ -1.42
COPA-201ENST00000241704 FBN1P35555 2871 aaKnown RBP6.16□□□□□ -1.42
COPA-201ENST00000241704 KRTAP16-1A8MUX0 517 aa6.14□□□□□ -1.43
COPA-201ENST00000241704 BSNQ9UPA5 3926 aa6.13□□□□□ -1.43
COPA-201ENST00000241704 KRTAP13-3Q3SY46 172 aa6.11□□□□□ -1.43
COPA-201ENST00000241704 NDUFAF8A1L188 74 aa6.1□□□□□ -1.43
COPA-201ENST00000241704 RPL37P61927 97 aaKnown RBP6.1□□□□□ -1.43
COPA-201ENST00000241704 TGP01266 2768 aa6.09□□□□□ -1.43
COPA-201ENST00000241704 ANK3Q12955 4377 aaKnown RBP6.08□□□□□ -1.44
COPA-201ENST00000241704 SRRM2Q9UQ35 2752 aaKnown RBP6.08□□□□□ -1.44
COPA-201ENST00000241704 H0YAA0 97 aa6.06□□□□□ -1.44
COPA-201ENST00000241704 M0QZ58 72 aa6.06□□□□□ -1.44
COPA-201ENST00000241704 KRTAP1-4P0C5Y4 121 aa6.05□□□□□ -1.44
COPA-201ENST00000241704 CSMD2Q7Z408 3487 aa6.04□□□□□ -1.44
COPA-201ENST00000241704 CUBNO60494 3623 aa6.03□□□□□ -1.44
COPA-201ENST00000241704 A0A0A0MQY5 61 aa6.02□□□□□ -1.45
COPA-201ENST00000241704 C20orf166-AS1Q96NR2 134 aa6□□□□□ -1.45
COPA-201ENST00000241704 PLAC4Q8WY50 150 aa5.99□□□□□ -1.45
COPA-201ENST00000241704 LUZP6Q538Z0 58 aa5.95□□□□□ -1.46
COPA-201ENST00000241704 TRRAPQ9Y4A5 3859 aa5.91□□□□□ -1.46
COPA-201ENST00000241704 P0C880 135 aa5.9□□□□□ -1.46
COPA-201ENST00000241704 A0A1B0GVY2 172 aa5.87□□□□□ -1.47
COPA-201ENST00000241704 XP32Q5T750 250 aa5.85□□□□□ -1.47
COPA-201ENST00000241704 C10orf95Q9H7T3 257 aa5.83□□□□□ -1.48
COPA-201ENST00000241704 TPRXLQ17RH7 258 aa5.82□□□□□ -1.48
COPA-201ENST00000241704 VPS13CQ709C8 3753 aa5.78□□□□□ -1.48
COPA-201ENST00000241704 FBN3Q75N90 2809 aa5.74□□□□□ -1.49
COPA-201ENST00000241704 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
COPA-201ENST00000241704 MEGF8Q7Z7M0 2845 aa5.7□□□□□ -1.5
COPA-201ENST00000241704 ZNF469Q96JG9 3925 aaPredicted RBP5.67□□□□□ -1.5
COPA-201ENST00000241704 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.5
COPA-201ENST00000241704 KRTAP10-10P60014 251 aa5.63□□□□□ -1.51
COPA-201ENST00000241704 AKAP9Q99996 3911 aa5.63□□□□□ -1.51
COPA-201ENST00000241704 COL7A1Q02388 2944 aa5.63□□□□□ -1.51
COPA-201ENST00000241704 HUWE1Q7Z6Z7 4374 aaKnown RBP5.61□□□□□ -1.51
COPA-201ENST00000241704 KRTAP3-1Q9BYR8 98 aa5.59□□□□□ -1.51
COPA-201ENST00000241704 ALMS1Q8TCU4 4167 aa5.59□□□□□ -1.51
COPA-201ENST00000241704 TNP1P09430 55 aa5.56□□□□□ -1.52
COPA-201ENST00000241704 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
COPA-201ENST00000241704 KRTAP13-4Q3LI77 160 aa5.49□□□□□ -1.53
COPA-201ENST00000241704 KRTAP10-6P60371 365 aaPredicted RBP5.47□□□□□ -1.53
COPA-201ENST00000241704 DNAH9Q9NYC9 4486 aa5.45□□□□□ -1.54
COPA-201ENST00000241704 PRO2289Q9P1D8 64 aa5.43□□□□□ -1.54
COPA-201ENST00000241704 KRTAP12-1P59990 96 aa5.43□□□□□ -1.54
COPA-201ENST00000241704 KRTAP10-4P60372 401 aaPredicted RBP5.4□□□□□ -1.54
COPA-201ENST00000241704 PP632Q6XCG6 107 aa5.39□□□□□ -1.55
COPA-201ENST00000241704 MT1HL1P0DM35 61 aa5.38□□□□□ -1.55
COPA-201ENST00000241704 KRTAP3-2Q9BYR7 98 aa5.34□□□□□ -1.55
COPA-201ENST00000241704 CSMD3Q7Z407 3707 aa5.3□□□□□ -1.56
COPA-201ENST00000241704 KRTAP4-5Q9BYR2 181 aa5.29□□□□□ -1.56
COPA-201ENST00000241704 PLECQ15149 4684 aaKnown RBP5.29□□□□□ -1.56
COPA-201ENST00000241704 DNHD1Q96M86 4753 aa5.28□□□□□ -1.56
COPA-201ENST00000241704 DNAH10Q8IVF4 4471 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms