RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 C8orf17Q9NRJ1 99 aa5.43□□□□□ -1.54
SYDE2-201ENST00000234668 PKIGQ9Y2B9 76 aa5.43□□□□□ -1.54
SYDE2-201ENST00000234668 CDK2AP2O75956 126 aa5.42□□□□□ -1.54
SYDE2-201ENST00000234668 LINC00483Q53H64 154 aa5.42□□□□□ -1.54
SYDE2-201ENST00000234668 IGLV7-43P04211 117 aa5.4□□□□□ -1.54
SYDE2-201ENST00000234668 RETNLBQ9BQ08 111 aa5.4□□□□□ -1.54
SYDE2-201ENST00000234668 A0A1B0GVX0 72 aa5.4□□□□□ -1.55
SYDE2-201ENST00000234668 ZNF706Q9Y5V0 76 aaPredicted RBP5.4□□□□□ -1.55
SYDE2-201ENST00000234668 A8MUN3 132 aa5.4□□□□□ -1.55
SYDE2-201ENST00000234668 CYP4F30PQ9H0H9 118 aa5.4□□□□□ -1.55
SYDE2-201ENST00000234668 PRO0628Q9UI54 55 aa5.4□□□□□ -1.55
SYDE2-201ENST00000234668 CD164Q04900 197 aa5.39□□□□□ -1.55
SYDE2-201ENST00000234668 A8MU10 97 aa5.38□□□□□ -1.55
SYDE2-201ENST00000234668 FAT2Q9NYQ8 4349 aa5.37□□□□□ -1.55
SYDE2-201ENST00000234668 VPS13BQ7Z7G8 4022 aa5.37□□□□□ -1.55
SYDE2-201ENST00000234668 Q5W150 140 aa5.37□□□□□ -1.55
SYDE2-201ENST00000234668 MRPL34Q9BQ48 92 aaKnown RBP5.36□□□□□ -1.55
SYDE2-201ENST00000234668 KRTAP10-1P60331 282 aa5.35□□□□□ -1.55
SYDE2-201ENST00000234668 H3BS24 57 aa5.35□□□□□ -1.55
SYDE2-201ENST00000234668 Q1T7F1 81 aa5.35□□□□□ -1.55
SYDE2-201ENST00000234668 FAM229AH3BQW9 127 aa5.34□□□□□ -1.55
SYDE2-201ENST00000234668 ASB16-AS1Q495Z4 193 aa5.34□□□□□ -1.55
SYDE2-201ENST00000234668 COA5Q86WW8 74 aa5.34□□□□□ -1.55
SYDE2-201ENST00000234668 PKD1P98161 4303 aa5.34□□□□□ -1.56
SYDE2-201ENST00000234668 H3BPC8 53 aa5.33□□□□□ -1.56
SYDE2-201ENST00000234668 PKHD1P08F94 4074 aa5.33□□□□□ -1.56
SYDE2-201ENST00000234668 SPANXA2-OT1Q8N9U9 137 aa5.32□□□□□ -1.56
SYDE2-201ENST00000234668 IGLV7-46A0A075B6I9 117 aa5.32□□□□□ -1.56
SYDE2-201ENST00000234668 Q8N9P0 234 aaPredicted RBP5.32□□□□□ -1.56
SYDE2-201ENST00000234668 TP53AIP1Q9HCN2 124 aa5.32□□□□□ -1.56
SYDE2-201ENST00000234668 KRTAP13-2Q52LG2 175 aa5.31□□□□□ -1.56
SYDE2-201ENST00000234668 SPAG11AQ6PDA7 123 aa5.31□□□□□ -1.56
SYDE2-201ENST00000234668 PRR15LQ9BU68 103 aa5.31□□□□□ -1.56
SYDE2-201ENST00000234668 CHKB-CPT1BH3BT56 60 aa5.3□□□□□ -1.56
SYDE2-201ENST00000234668 Q5VV11 94 aa5.3□□□□□ -1.56
SYDE2-201ENST00000234668 HRES1P13985 223 aa5.27□□□□□ -1.57
SYDE2-201ENST00000234668 PRR26Q8N8Z3 221 aa5.27□□□□□ -1.57
SYDE2-201ENST00000234668 FAT1Q14517 4588 aa5.27□□□□□ -1.57
SYDE2-201ENST00000234668 SSBP3-AS1Q7Z2R9 100 aa5.26□□□□□ -1.57
SYDE2-201ENST00000234668 LINC00313P59037 77 aa5.26□□□□□ -1.57
SYDE2-201ENST00000234668 C1orf195Q5TG92 126 aa5.26□□□□□ -1.57
SYDE2-201ENST00000234668 SMR3BP02814 79 aaPredicted RBP5.25□□□□□ -1.57
SYDE2-201ENST00000234668 PLA2G1BP04054 148 aaKnown RBP5.24□□□□□ -1.57
SYDE2-201ENST00000234668 SPTSSBQ8NFR3 76 aa5.23□□□□□ -1.57
SYDE2-201ENST00000234668 SACSQ9NZJ4 4579 aa5.22□□□□□ -1.57
SYDE2-201ENST00000234668 A6NED7 52 aa5.22□□□□□ -1.57
SYDE2-201ENST00000234668 KRTAP1-4P0C5Y4 121 aa5.22□□□□□ -1.57
SYDE2-201ENST00000234668 KRTAP13-3Q3SY46 172 aa5.22□□□□□ -1.57
SYDE2-201ENST00000234668 LIMD2Q9BT23 127 aa5.22□□□□□ -1.57
SYDE2-201ENST00000234668 V9GYY9 64 aa5.22□□□□□ -1.57
SYDE2-201ENST00000234668 Q6ZSA8 131 aa5.21□□□□□ -1.57
SYDE2-201ENST00000234668 IGKV2D-30A0A075B6S6 120 aa5.21□□□□□ -1.58
SYDE2-201ENST00000234668 LOC101927531A0A1B0GV80 90 aa5.21□□□□□ -1.58
SYDE2-201ENST00000234668 IGKV2-30P06310 120 aa5.21□□□□□ -1.58
SYDE2-201ENST00000234668 DYNC1H1Q14204 4646 aaKnown RBP5.2□□□□□ -1.58
SYDE2-201ENST00000234668 LCA10Q71F78 164 aa5.19□□□□□ -1.58
SYDE2-201ENST00000234668 KRTAP21-3Q3LHN1 58 aa5.19□□□□□ -1.58
SYDE2-201ENST00000234668 TYMSOSQ8TAI1 123 aa5.19□□□□□ -1.58
SYDE2-201ENST00000234668 C8orf87E5RJ46 101 aa5.17□□□□□ -1.58
SYDE2-201ENST00000234668 SPINK7P58062 85 aa5.17□□□□□ -1.58
SYDE2-201ENST00000234668 PMAIP1Q13794 54 aa5.16□□□□□ -1.58
SYDE2-201ENST00000234668 KRTAP16-1A8MUX0 517 aa5.15□□□□□ -1.58
SYDE2-201ENST00000234668 LINC01558Q9Y6Z2 57 aa5.14□□□□□ -1.59
SYDE2-201ENST00000234668 Q75L30 129 aa5.14□□□□□ -1.59
SYDE2-201ENST00000234668 ACYP2P14621 99 aa5.13□□□□□ -1.59
SYDE2-201ENST00000234668 C9orf92A6NGG3 77 aa5.12□□□□□ -1.59
SYDE2-201ENST00000234668 KMT2CQ8NEZ4 4911 aaKnown RBP5.11□□□□□ -1.59
SYDE2-201ENST00000234668 SPINK1P00995 79 aa5.11□□□□□ -1.59
SYDE2-201ENST00000234668 Q8N1X5 172 aa5.1□□□□□ -1.59
SYDE2-201ENST00000234668 DMAC1Q96GE9 116 aa5.09□□□□□ -1.59
SYDE2-201ENST00000234668 LINC00304Q8N9R0 145 aa5.09□□□□□ -1.6
SYDE2-201ENST00000234668 APOBP04114 4563 aaKnown RBP5.08□□□□□ -1.6
SYDE2-201ENST00000234668 C7orf65Q6ZTY9 151 aa5.08□□□□□ -1.6
SYDE2-201ENST00000234668 LRP1Q07954 4544 aaKnown RBP5.07□□□□□ -1.6
SYDE2-201ENST00000234668 DMBT1Q9UGM3 2413 aaPredicted RBP5.07□□□□□ -1.6
SYDE2-201ENST00000234668 FLG2Q5D862 2391 aaPredicted RBP5.07□□□□□ -1.6
SYDE2-201ENST00000234668 CDC42SE1Q9NRR8 79 aa5.06□□□□□ -1.6
SYDE2-201ENST00000234668 MYCBP2O75592 4640 aa5.05□□□□□ -1.6
SYDE2-201ENST00000234668 A0A1B0GU69 56 aa5.04□□□□□ -1.6
SYDE2-201ENST00000234668 ATP11AUNQ6ZP68 121 aa5.03□□□□□ -1.6
SYDE2-201ENST00000234668 RYR2Q92736 4967 aa5□□□□□ -1.61
SYDE2-201ENST00000234668 A6NN06 94 aa4.99□□□□□ -1.61
SYDE2-201ENST00000234668 PKHD1L1Q86WI1 4243 aa4.98□□□□□ -1.61
SYDE2-201ENST00000234668 A0A1B0GVY2 172 aa4.97□□□□□ -1.61
SYDE2-201ENST00000234668 KRTAP10-4P60372 401 aaPredicted RBP4.97□□□□□ -1.61
SYDE2-201ENST00000234668 SEC61GP60059 68 aa4.95□□□□□ -1.62
SYDE2-201ENST00000234668 KTN1-AS1Q86SY8 53 aa4.94□□□□□ -1.62
SYDE2-201ENST00000234668 ADM2Q7Z4H4 148 aa4.94□□□□□ -1.62
SYDE2-201ENST00000234668 HSPG2P98160 4391 aa4.94□□□□□ -1.62
SYDE2-201ENST00000234668 PRAC1Q96KF2 57 aa4.93□□□□□ -1.62
SYDE2-201ENST00000234668 KRTAP3-1Q9BYR8 98 aa4.92□□□□□ -1.62
SYDE2-201ENST00000234668 MIR22HGQ0VDD5 57 aa4.92□□□□□ -1.62
SYDE2-201ENST00000234668 RYR3Q15413 4870 aa4.91□□□□□ -1.62
SYDE2-201ENST00000234668 FAT3Q8TDW7 4589 aa4.91□□□□□ -1.62
SYDE2-201ENST00000234668 UQCR11O14957 56 aa4.9□□□□□ -1.62
SYDE2-201ENST00000234668 A8MUU9 505 aa4.89□□□□□ -1.63
SYDE2-201ENST00000234668 LCE2BO14633 110 aa4.89□□□□□ -1.63
SYDE2-201ENST00000234668 C20orf166-AS1Q96NR2 134 aa4.89□□□□□ -1.63
SYDE2-201ENST00000234668 RBM12B-AS1Q9P1G2 102 aa4.89□□□□□ -1.63
SYDE2-201ENST00000234668 SPATA8Q6RVD6 105 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms