RNA–Protein interactions for RNA: ENST00000229866.10

RNF8-201, Transcript of ring finger protein 8, humanhuman

TSL 2

Gene RNF8, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-201ENST00000229866 SPINK6Q6UWN8 80 aa12.65□□□□□ -0.38
RNF8-201ENST00000229866 Q1T7F1 81 aa12.64□□□□□ -0.39
RNF8-201ENST00000229866 ALMS1Q8TCU4 4167 aa12.62□□□□□ -0.39
RNF8-201ENST00000229866 IGLV7-46A0A075B6I9 117 aa12.62□□□□□ -0.39
RNF8-201ENST00000229866 C8orf87E5RJ46 101 aa12.62□□□□□ -0.39
RNF8-201ENST00000229866 A0A087X002 238 aa12.61□□□□□ -0.39
RNF8-201ENST00000229866 NOTCH2NLQ7Z3S9 236 aa12.61□□□□□ -0.39
RNF8-201ENST00000229866 LINC00336Q6ZUF6 198 aa12.61□□□□□ -0.39
RNF8-201ENST00000229866 V9GYY9 64 aa12.56□□□□□ -0.4
RNF8-201ENST00000229866 KRTAP13-2Q52LG2 175 aa12.55□□□□□ -0.4
RNF8-201ENST00000229866 PCOTHQ58A44 107 aa12.55□□□□□ -0.4
RNF8-201ENST00000229866 PRO0628Q9UI54 55 aa12.54□□□□□ -0.4
RNF8-201ENST00000229866 FRAS1Q86XX4 4008 aa12.53□□□□□ -0.4
RNF8-201ENST00000229866 LOC101927531A0A1B0GV80 90 aa12.51□□□□□ -0.41
RNF8-201ENST00000229866 SACSQ9NZJ4 4579 aa12.51□□□□□ -0.41
RNF8-201ENST00000229866 DNAH11Q96DT5 4516 aa12.5□□□□□ -0.41
RNF8-201ENST00000229866 DNAH5Q8TE73 4624 aa12.49□□□□□ -0.41
RNF8-201ENST00000229866 C1orf195Q5TG92 126 aa12.48□□□□□ -0.41
RNF8-201ENST00000229866 LIMD2Q9BT23 127 aa12.47□□□□□ -0.41
RNF8-201ENST00000229866 LINC00313P59037 77 aa12.47□□□□□ -0.41
RNF8-201ENST00000229866 KRTAP1-4P0C5Y4 121 aa12.46□□□□□ -0.42
RNF8-201ENST00000229866 COA5Q86WW8 74 aa12.46□□□□□ -0.42
RNF8-201ENST00000229866 BRK1Q8WUW1 75 aa12.44□□□□□ -0.42
RNF8-201ENST00000229866 KRTAP13-3Q3SY46 172 aa12.43□□□□□ -0.42
RNF8-201ENST00000229866 HYDINQ4G0P3 5121 aa12.43□□□□□ -0.42
RNF8-201ENST00000229866 Q5W150 140 aa12.41□□□□□ -0.42
RNF8-201ENST00000229866 KMT2CQ8NEZ4 4911 aaKnown RBP12.41□□□□□ -0.42
RNF8-201ENST00000229866 PKD1P98161 4303 aa12.39□□□□□ -0.43
RNF8-201ENST00000229866 C4orf48Q5BLP8 95 aa12.38□□□□□ -0.43
RNF8-201ENST00000229866 PSPHP1O15172 72 aa12.38□□□□□ -0.43
RNF8-201ENST00000229866 Q8N9P0 234 aaPredicted RBP12.38□□□□□ -0.43
RNF8-201ENST00000229866 FAM229AH3BQW9 127 aa12.37□□□□□ -0.43
RNF8-201ENST00000229866 PLA2G1BP04054 148 aaKnown RBP12.37□□□□□ -0.43
RNF8-201ENST00000229866 TYMSOSQ8TAI1 123 aa12.35□□□□□ -0.43
RNF8-201ENST00000229866 FAT2Q9NYQ8 4349 aa12.32□□□□□ -0.44
RNF8-201ENST00000229866 SPINK1P00995 79 aa12.32□□□□□ -0.44
RNF8-201ENST00000229866 A8MUN3 132 aa12.31□□□□□ -0.44
RNF8-201ENST00000229866 RYR2Q92736 4967 aa12.29□□□□□ -0.44
RNF8-201ENST00000229866 HRES1P13985 223 aa12.28□□□□□ -0.44
RNF8-201ENST00000229866 LRP1BQ9NZR2 4599 aa12.27□□□□□ -0.45
RNF8-201ENST00000229866 KRTAP16-1A8MUX0 517 aa12.27□□□□□ -0.45
RNF8-201ENST00000229866 Q5VV11 94 aa12.25□□□□□ -0.45
RNF8-201ENST00000229866 PRR15LQ9BU68 103 aa12.24□□□□□ -0.45
RNF8-201ENST00000229866 RPS29P62273 56 aaKnown RBP12.22□□□□□ -0.45
RNF8-201ENST00000229866 IGKV2-30P06310 120 aa12.21□□□□□ -0.45
RNF8-201ENST00000229866 ACYP2P14621 99 aa12.2□□□□□ -0.46
RNF8-201ENST00000229866 SPAG11AQ6PDA7 123 aa12.2□□□□□ -0.46
RNF8-201ENST00000229866 RYR3Q15413 4870 aa12.2□□□□□ -0.46
RNF8-201ENST00000229866 LINC00304Q8N9R0 145 aa12.19□□□□□ -0.46
RNF8-201ENST00000229866 LINC01558Q9Y6Z2 57 aa12.19□□□□□ -0.46
RNF8-201ENST00000229866 RETNLBQ9BQ08 111 aa12.17□□□□□ -0.46
RNF8-201ENST00000229866 CHKB-CPT1BH3BT56 60 aa12.16□□□□□ -0.46
RNF8-201ENST00000229866 Q75L30 129 aa12.16□□□□□ -0.46
RNF8-201ENST00000229866 PRR26Q8N8Z3 221 aa12.15□□□□□ -0.46
RNF8-201ENST00000229866 DMAC1Q96GE9 116 aa12.15□□□□□ -0.46
RNF8-201ENST00000229866 A0A1B0GVY2 172 aa12.11□□□□□ -0.47
RNF8-201ENST00000229866 VPS13BQ7Z7G8 4022 aa12.11□□□□□ -0.47
RNF8-201ENST00000229866 SMR3BP02814 79 aaPredicted RBP12.08□□□□□ -0.48
RNF8-201ENST00000229866 IGKV2D-30A0A075B6S6 120 aa12.02□□□□□ -0.48
RNF8-201ENST00000229866 A6NED7 52 aa12.02□□□□□ -0.49
RNF8-201ENST00000229866 KRTAP10-4P60372 401 aaPredicted RBP11.98□□□□□ -0.49
RNF8-201ENST00000229866 PKHD1P08F94 4074 aa11.93□□□□□ -0.5
RNF8-201ENST00000229866 C7orf65Q6ZTY9 151 aa11.92□□□□□ -0.5
RNF8-201ENST00000229866 CDC42SE1Q9NRR8 79 aa11.9□□□□□ -0.5
RNF8-201ENST00000229866 LCA10Q71F78 164 aa11.89□□□□□ -0.51
RNF8-201ENST00000229866 DYNC1H1Q14204 4646 aaKnown RBP11.88□□□□□ -0.51
RNF8-201ENST00000229866 A8MU10 97 aa11.86□□□□□ -0.51
RNF8-201ENST00000229866 ATP11AUNQ6ZP68 121 aa11.85□□□□□ -0.51
RNF8-201ENST00000229866 C20orf166-AS1Q96NR2 134 aa11.84□□□□□ -0.51
RNF8-201ENST00000229866 A8MUU9 505 aa11.83□□□□□ -0.52
RNF8-201ENST00000229866 SPINK7P58062 85 aa11.81□□□□□ -0.52
RNF8-201ENST00000229866 C9orf92A6NGG3 77 aa11.79□□□□□ -0.52
RNF8-201ENST00000229866 PMAIP1Q13794 54 aa11.78□□□□□ -0.52
RNF8-201ENST00000229866 A0A1B0GU69 56 aa11.78□□□□□ -0.52
RNF8-201ENST00000229866 SPTSSBQ8NFR3 76 aa11.77□□□□□ -0.53
RNF8-201ENST00000229866 APOBP04114 4563 aaKnown RBP11.74□□□□□ -0.53
RNF8-201ENST00000229866 EPPK1P58107 5090 aaKnown RBP11.74□□□□□ -0.53
RNF8-201ENST00000229866 PKHD1L1Q86WI1 4243 aa11.71□□□□□ -0.53
RNF8-201ENST00000229866 Q8N1X5 172 aa11.68□□□□□ -0.54
RNF8-201ENST00000229866 FAT1Q14517 4588 aa11.62□□□□□ -0.55
RNF8-201ENST00000229866 A6NN06 94 aa11.59□□□□□ -0.55
RNF8-201ENST00000229866 KRTAP10-8P60410 259 aa11.57□□□□□ -0.56
RNF8-201ENST00000229866 UQCR11O14957 56 aa11.56□□□□□ -0.56
RNF8-201ENST00000229866 Q5VSD8 79 aa11.56□□□□□ -0.56
RNF8-201ENST00000229866 SPATA8Q6RVD6 105 aa11.54□□□□□ -0.56
RNF8-201ENST00000229866 SEC61GP60059 68 aa11.53□□□□□ -0.56
RNF8-201ENST00000229866 HSPG2P98160 4391 aa11.51□□□□□ -0.57
RNF8-201ENST00000229866 KTN1-AS1Q86SY8 53 aa11.51□□□□□ -0.57
RNF8-201ENST00000229866 RYR1P21817 5038 aa11.49□□□□□ -0.57
RNF8-201ENST00000229866 MIR22HGQ0VDD5 57 aa11.49□□□□□ -0.57
RNF8-201ENST00000229866 FLG2Q5D862 2391 aaPredicted RBP11.49□□□□□ -0.57
RNF8-201ENST00000229866 KIAA1109Q2LD37 5005 aa11.46□□□□□ -0.57
RNF8-201ENST00000229866 KRTAP3-1Q9BYR8 98 aa11.46□□□□□ -0.57
RNF8-201ENST00000229866 BIRC6Q9NR09 4857 aa11.45□□□□□ -0.58
RNF8-201ENST00000229866 COX6B2Q6YFQ2 88 aa11.41□□□□□ -0.58
RNF8-201ENST00000229866 RPL37P61927 97 aaKnown RBP11.35□□□□□ -0.59
RNF8-201ENST00000229866 TNXBP22105 4242 aa11.29□□□□□ -0.6
RNF8-201ENST00000229866 KRTAP17-1Q9BYP8 105 aa11.29□□□□□ -0.6
RNF8-201ENST00000229866 FAT3Q8TDW7 4589 aa11.28□□□□□ -0.6
RNF8-201ENST00000229866 XP32Q5T750 250 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms