RNA–Protein interactions for RNA: ENST00000229379.2

COX6A1-201, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COX6A1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-201ENST00000229379 FAM236CP0DP71 79 aa7.91□□□□□ -1.14
COX6A1-201ENST00000229379 RBM3P98179 157 aaKnown RBP7.91□□□□□ -1.14
COX6A1-201ENST00000229379 MT1FP04733 61 aa7.9□□□□□ -1.14
COX6A1-201ENST00000229379 DSCR8Q96T75 97 aa7.87□□□□□ -1.15
COX6A1-201ENST00000229379 LCE2BO14633 110 aa7.85□□□□□ -1.15
COX6A1-201ENST00000229379 Q6ZQT0 140 aa7.85□□□□□ -1.15
COX6A1-201ENST00000229379 C9JAW5 83 aa7.83□□□□□ -1.16
COX6A1-201ENST00000229379 C8orf87E5RJ46 101 aa7.83□□□□□ -1.16
COX6A1-201ENST00000229379 RBM12B-AS1Q9P1G2 102 aa7.83□□□□□ -1.16
COX6A1-201ENST00000229379 ZCCHC13Q8WW36 166 aaKnown RBP7.82□□□□□ -1.16
COX6A1-201ENST00000229379 KRTAP9-3Q9BYQ3 159 aa7.81□□□□□ -1.16
COX6A1-201ENST00000229379 FCGBPQ9Y6R7 5405 aaPredicted RBP7.81□□□□□ -1.16
COX6A1-201ENST00000229379 SPINK7P58062 85 aa7.79□□□□□ -1.16
COX6A1-201ENST00000229379 IGKV3D-7A0A0C4DH55 119 aa7.78□□□□□ -1.16
COX6A1-201ENST00000229379 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.78□□□□□ -1.16
COX6A1-201ENST00000229379 KRTAP10-10P60014 251 aa7.78□□□□□ -1.16
COX6A1-201ENST00000229379 Q8N9P0 234 aaPredicted RBP7.77□□□□□ -1.17
COX6A1-201ENST00000229379 C14orf132Q9NPU4 83 aa7.77□□□□□ -1.17
COX6A1-201ENST00000229379 C8orf17Q9NRJ1 99 aa7.77□□□□□ -1.17
COX6A1-201ENST00000229379 ATXN8Q156A1 80 aa7.76□□□□□ -1.17
COX6A1-201ENST00000229379 J3KT08 172 aa7.75□□□□□ -1.17
COX6A1-201ENST00000229379 LOC110117498A0A087WWA1 95 aa7.74□□□□□ -1.17
COX6A1-201ENST00000229379 A8MWP4 228 aa7.73□□□□□ -1.17
COX6A1-201ENST00000229379 KRTAP19-1Q8IUB9 90 aa7.73□□□□□ -1.17
COX6A1-201ENST00000229379 M0R143 59 aa7.72□□□□□ -1.17
COX6A1-201ENST00000229379 JMJD7-PLA2G4BH0Y9G9 81 aa7.7□□□□□ -1.18
COX6A1-201ENST00000229379 MTURNQ8N3F0 131 aa7.7□□□□□ -1.18
COX6A1-201ENST00000229379 KRTAP9-7A8MTY7 169 aa7.69□□□□□ -1.18
COX6A1-201ENST00000229379 NDUFB1O75438 58 aa7.69□□□□□ -1.18
COX6A1-201ENST00000229379 Q6ZVQ6 151 aa7.69□□□□□ -1.18
COX6A1-201ENST00000229379 WFDC13Q8IUB5 93 aa7.69□□□□□ -1.18
COX6A1-201ENST00000229379 BATFQ16520 125 aa7.68□□□□□ -1.18
COX6A1-201ENST00000229379 MMP24-AS1A0A0U1RRL7 71 aa7.67□□□□□ -1.18
COX6A1-201ENST00000229379 LYRM7Q5U5X0 104 aa7.66□□□□□ -1.18
COX6A1-201ENST00000229379 PRR15Q8IV56 129 aa7.66□□□□□ -1.18
COX6A1-201ENST00000229379 C21orf62-AS1Q17RA5 79 aa7.64□□□□□ -1.19
COX6A1-201ENST00000229379 K7EQZ3 153 aa7.63□□□□□ -1.19
COX6A1-201ENST00000229379 SMIM6P0DI80 62 aa7.63□□□□□ -1.19
COX6A1-201ENST00000229379 NREPQ16612 68 aa7.63□□□□□ -1.19
COX6A1-201ENST00000229379 A0A1B0GW54 56 aa7.6□□□□□ -1.19
COX6A1-201ENST00000229379 PDE6GP18545 87 aa7.6□□□□□ -1.19
COX6A1-201ENST00000229379 MRPL34Q9BQ48 92 aaKnown RBP7.6□□□□□ -1.19
COX6A1-201ENST00000229379 TAX1BP3O14907 124 aa7.59□□□□□ -1.19
COX6A1-201ENST00000229379 TMEM254Q8TBM7 123 aa7.59□□□□□ -1.19
COX6A1-201ENST00000229379 Q5W150 140 aa7.57□□□□□ -1.2
COX6A1-201ENST00000229379 hDV103S1A0JD37 113 aa7.56□□□□□ -1.2
COX6A1-201ENST00000229379 C9orf118A6NHY6 69 aa7.56□□□□□ -1.2
COX6A1-201ENST00000229379 Q8N9L7 120 aa7.56□□□□□ -1.2
COX6A1-201ENST00000229379 NDUFS5O43920 106 aa7.55□□□□□ -1.2
COX6A1-201ENST00000229379 LOC105371267A0A1B0GV96 52 aa7.54□□□□□ -1.2
COX6A1-201ENST00000229379 A0A1W2PPM0 123 aa7.54□□□□□ -1.2
COX6A1-201ENST00000229379 TSTD3H0UI37 97 aa7.53□□□□□ -1.2
COX6A1-201ENST00000229379 H3BT86 120 aa7.52□□□□□ -1.21
COX6A1-201ENST00000229379 IGKV2D-30A0A075B6S6 120 aa7.51□□□□□ -1.21
COX6A1-201ENST00000229379 IGKV2-30P06310 120 aa7.51□□□□□ -1.21
COX6A1-201ENST00000229379 SMCPP49901 116 aaPredicted RBP7.5□□□□□ -1.21
COX6A1-201ENST00000229379 MACF1Q9UPN3 7388 aaKnown RBP7.5□□□□□ -1.21
COX6A1-201ENST00000229379 BPY2O14599 106 aa7.49□□□□□ -1.21
COX6A1-201ENST00000229379 KRTAP19-6Q3LI70 58 aa7.49□□□□□ -1.21
COX6A1-201ENST00000229379 H1FX-AS1Q4G0G2 97 aa7.49□□□□□ -1.21
COX6A1-201ENST00000229379 SYNE2Q8WXH0 6885 aaKnown RBP7.43□□□□□ -1.22
COX6A1-201ENST00000229379 HCG22E2RYF7 251 aa7.43□□□□□ -1.22
COX6A1-201ENST00000229379 C4orf26Q17RF5 130 aa7.42□□□□□ -1.22
COX6A1-201ENST00000229379 CASC2Q6XLA1 102 aa7.42□□□□□ -1.22
COX6A1-201ENST00000229379 SPCS1Q9Y6A9 102 aa7.42□□□□□ -1.22
COX6A1-201ENST00000229379 C7orf65Q6ZTY9 151 aa7.41□□□□□ -1.22
COX6A1-201ENST00000229379 LINC00846Q9NV44 126 aa7.38□□□□□ -1.23
COX6A1-201ENST00000229379 PRO0461Q9UI25 63 aa7.38□□□□□ -1.23
COX6A1-201ENST00000229379 KRTAP3-1Q9BYR8 98 aa7.37□□□□□ -1.23
COX6A1-201ENST00000229379 C5orf47Q569G3 176 aa7.32□□□□□ -1.24
COX6A1-201ENST00000229379 CXCL6P80162 114 aa7.28□□□□□ -1.24
COX6A1-201ENST00000229379 K7EP34 96 aa7.27□□□□□ -1.25
COX6A1-201ENST00000229379 UBL5Q9BZL1 73 aa7.25□□□□□ -1.25
COX6A1-201ENST00000229379 COL5A1-AS1Q5SY13 56 aa7.24□□□□□ -1.25
COX6A1-201ENST00000229379 LCA10Q71F78 164 aa7.23□□□□□ -1.25
COX6A1-201ENST00000229379 MT1BP07438 61 aa7.22□□□□□ -1.25
COX6A1-201ENST00000229379 C1orf64Q8NEQ6 169 aa7.22□□□□□ -1.25
COX6A1-201ENST00000229379 S4R3F8 94 aa7.22□□□□□ -1.25
COX6A1-201ENST00000229379 FAM236AA0A1B0GUQ0 79 aa7.19□□□□□ -1.26
COX6A1-201ENST00000229379 FAM236BA0A1B0GV22 79 aa7.19□□□□□ -1.26
COX6A1-201ENST00000229379 A0A087WVE0 104 aa7.18□□□□□ -1.26
COX6A1-201ENST00000229379 KRTAP6-3Q3LI67 103 aa7.16□□□□□ -1.26
COX6A1-201ENST00000229379 KRTAP3-3Q9BYR6 98 aa7.16□□□□□ -1.26
COX6A1-201ENST00000229379 ETDBQ3ZM63 59 aa7.15□□□□□ -1.26
COX6A1-201ENST00000229379 KRTAP19-8Q3LI54 63 aa7.11□□□□□ -1.27
COX6A1-201ENST00000229379 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
COX6A1-201ENST00000229379 SPRR2GQ9BYE4 73 aa7.11□□□□□ -1.27
COX6A1-201ENST00000229379 PCP4L1A6NKN8 68 aa7.09□□□□□ -1.27
COX6A1-201ENST00000229379 Q5VV11 94 aa7.08□□□□□ -1.28
COX6A1-201ENST00000229379 CYP4F30PQ9H0H9 118 aa7.08□□□□□ -1.28
COX6A1-201ENST00000229379 TP53AIP1Q9HCN2 124 aa7.08□□□□□ -1.28
COX6A1-201ENST00000229379 A6NN06 94 aa7.07□□□□□ -1.28
COX6A1-201ENST00000229379 MUC12Q9UKN1 5478 aa7.06□□□□□ -1.28
COX6A1-201ENST00000229379 F8W1H4 67 aa7.06□□□□□ -1.28
COX6A1-201ENST00000229379 GTF2H5Q6ZYL4 71 aa7.06□□□□□ -1.28
COX6A1-201ENST00000229379 KLKP1Q107X0 134 aa7.04□□□□□ -1.28
COX6A1-201ENST00000229379 KRTAP10-5P60370 271 aa7.01□□□□□ -1.29
COX6A1-201ENST00000229379 TRAV22A0A0B4J277 110 aa6.98□□□□□ -1.29
COX6A1-201ENST00000229379 NEBP20929 6669 aa6.97□□□□□ -1.29
COX6A1-201ENST00000229379 LOC101927531A0A1B0GV80 90 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms