RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 MYO15AQ9UKN7 3530 aa6.74□□□□□ -1.33
USP31-201ENST00000219689 R4GN34 69 aa6.73□□□□□ -1.33
USP31-201ENST00000219689 Q6ZR54 194 aa6.72□□□□□ -1.33
USP31-201ENST00000219689 TENM2Q9NT68 2774 aa6.72□□□□□ -1.33
USP31-201ENST00000219689 SPTBN5Q9NRC6 3674 aaKnown RBP6.72□□□□□ -1.33
USP31-201ENST00000219689 Q6ZSA8 131 aa6.71□□□□□ -1.34
USP31-201ENST00000219689 COL7A1Q02388 2944 aa6.71□□□□□ -1.34
USP31-201ENST00000219689 KRTAP26-1Q6PEX3 210 aa6.7□□□□□ -1.34
USP31-201ENST00000219689 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.7□□□□□ -1.34
USP31-201ENST00000219689 TENM4Q6N022 2769 aa6.66□□□□□ -1.34
USP31-201ENST00000219689 KRTAP24-1Q3LI83 254 aa6.66□□□□□ -1.34
USP31-201ENST00000219689 KRTAP10-3P60369 221 aa6.66□□□□□ -1.34
USP31-201ENST00000219689 SPRR1AP35321 89 aa6.66□□□□□ -1.34
USP31-201ENST00000219689 SZT2Q5T011 3432 aa6.64□□□□□ -1.35
USP31-201ENST00000219689 TNP2Q05952 138 aa6.63□□□□□ -1.35
USP31-201ENST00000219689 ZFHX3Q15911 3703 aa6.63□□□□□ -1.35
USP31-201ENST00000219689 KRTAP29-1A8MX34 341 aaPredicted RBP6.62□□□□□ -1.35
USP31-201ENST00000219689 WWC2-AS2Q96NR7 200 aa6.62□□□□□ -1.35
USP31-201ENST00000219689 M0QZ58 72 aa6.61□□□□□ -1.35
USP31-201ENST00000219689 M0R2T5 61 aa6.6□□□□□ -1.35
USP31-201ENST00000219689 SPEGQ15772 3267 aa6.6□□□□□ -1.35
USP31-201ENST00000219689 A8MUU9 505 aa6.59□□□□□ -1.35
USP31-201ENST00000219689 PLAC4Q8WY50 150 aa6.59□□□□□ -1.35
USP31-201ENST00000219689 PANO1I0J062 215 aa6.58□□□□□ -1.36
USP31-201ENST00000219689 LCE6AA0A183 80 aa6.57□□□□□ -1.36
USP31-201ENST00000219689 A0A087X002 238 aa6.53□□□□□ -1.36
USP31-201ENST00000219689 ASPMQ8IZT6 3477 aa6.53□□□□□ -1.36
USP31-201ENST00000219689 C20orf166-AS1Q96NR2 134 aa6.52□□□□□ -1.37
USP31-201ENST00000219689 SPRR1BP22528 89 aa6.51□□□□□ -1.37
USP31-201ENST00000219689 NOTCH2NLQ7Z3S9 236 aa6.5□□□□□ -1.37
USP31-201ENST00000219689 SMG1Q96Q15 3661 aaKnown RBP6.5□□□□□ -1.37
USP31-201ENST00000219689 EYSQ5T1H1 3165 aa6.49□□□□□ -1.37
USP31-201ENST00000219689 FBN1P35555 2871 aaKnown RBP6.47□□□□□ -1.37
USP31-201ENST00000219689 LAMA5O15230 3695 aa6.46□□□□□ -1.38
USP31-201ENST00000219689 KRTAP4-16G5E9R7 235 aaPredicted RBP6.45□□□□□ -1.38
USP31-201ENST00000219689 PLAC8Q9NZF1 115 aa6.44□□□□□ -1.38
USP31-201ENST00000219689 KRTAP11-1Q8IUC1 163 aa6.43□□□□□ -1.38
USP31-201ENST00000219689 DMDP11532 3685 aa6.42□□□□□ -1.38
USP31-201ENST00000219689 MEGF8Q7Z7M0 2845 aa6.42□□□□□ -1.38
USP31-201ENST00000219689 LOC400499M0QZD8 3231 aa6.41□□□□□ -1.38
USP31-201ENST00000219689 C10orf95Q9H7T3 257 aa6.4□□□□□ -1.38
USP31-201ENST00000219689 SPENQ96T58 3664 aaKnown RBP6.39□□□□□ -1.39
USP31-201ENST00000219689 OTOGQ6ZRI0 2925 aa6.35□□□□□ -1.39
USP31-201ENST00000219689 CSMD1Q96PZ7 3565 aa6.32□□□□□ -1.4
USP31-201ENST00000219689 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
USP31-201ENST00000219689 DCHS1Q96JQ0 3298 aa6.29□□□□□ -1.4
USP31-201ENST00000219689 KRTAP1-3Q8IUG1 177 aa6.29□□□□□ -1.4
USP31-201ENST00000219689 RELNP78509 3460 aa6.29□□□□□ -1.4
USP31-201ENST00000219689 ZFHX4Q86UP3 3567 aa6.27□□□□□ -1.41
USP31-201ENST00000219689 H0YAA0 97 aa6.25□□□□□ -1.41
USP31-201ENST00000219689 FBN3Q75N90 2809 aa6.24□□□□□ -1.41
USP31-201ENST00000219689 KRTAP1-1Q07627 177 aa6.22□□□□□ -1.41
USP31-201ENST00000219689 NBPF19A0A087WUL8 3843 aa6.17□□□□□ -1.42
USP31-201ENST00000219689 P0C880 135 aa6.16□□□□□ -1.42
USP31-201ENST00000219689 Q5VSD8 79 aa6.15□□□□□ -1.42
USP31-201ENST00000219689 KRTAP7-1Q8IUC3 87 aa6.14□□□□□ -1.43
USP31-201ENST00000219689 KRTAP10-1P60331 282 aa6.13□□□□□ -1.43
USP31-201ENST00000219689 PP632Q6XCG6 107 aa6.12□□□□□ -1.43
USP31-201ENST00000219689 TNP1P09430 55 aa6.11□□□□□ -1.43
USP31-201ENST00000219689 KRTAP10-2P60368 255 aa6.11□□□□□ -1.43
USP31-201ENST00000219689 CUBNO60494 3623 aa6.09□□□□□ -1.44
USP31-201ENST00000219689 VPS13CQ709C8 3753 aa6.07□□□□□ -1.44
USP31-201ENST00000219689 KRTAP10-8P60410 259 aa6.06□□□□□ -1.44
USP31-201ENST00000219689 RPS29P62273 56 aaKnown RBP6.03□□□□□ -1.44
USP31-201ENST00000219689 KRTAP13-1Q8IUC0 172 aa5.99□□□□□ -1.45
USP31-201ENST00000219689 KRTAP13-2Q52LG2 175 aa5.99□□□□□ -1.45
USP31-201ENST00000219689 Q6ZRN7 208 aaPredicted RBP5.93□□□□□ -1.46
USP31-201ENST00000219689 AKAP9Q99996 3911 aa5.92□□□□□ -1.46
USP31-201ENST00000219689 SVEP1Q4LDE5 3571 aa5.88□□□□□ -1.47
USP31-201ENST00000219689 TRRAPQ9Y4A5 3859 aa5.83□□□□□ -1.48
USP31-201ENST00000219689 ALMS1Q8TCU4 4167 aa5.82□□□□□ -1.48
USP31-201ENST00000219689 TPRXLQ17RH7 258 aa5.82□□□□□ -1.48
USP31-201ENST00000219689 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
USP31-201ENST00000219689 CSMD3Q7Z407 3707 aa5.77□□□□□ -1.49
USP31-201ENST00000219689 MUC3AQ02505 3323 aa5.72□□□□□ -1.49
USP31-201ENST00000219689 KRTAP13-3Q3SY46 172 aa5.65□□□□□ -1.51
USP31-201ENST00000219689 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
USP31-201ENST00000219689 CSMD2Q7Z408 3487 aa5.63□□□□□ -1.51
USP31-201ENST00000219689 XP32Q5T750 250 aa5.63□□□□□ -1.51
USP31-201ENST00000219689 A0A1B0GVY2 172 aa5.62□□□□□ -1.51
USP31-201ENST00000219689 KRTAP12-1P59990 96 aa5.57□□□□□ -1.52
USP31-201ENST00000219689 PRO2289Q9P1D8 64 aa5.57□□□□□ -1.52
USP31-201ENST00000219689 KRTAP13-4Q3LI77 160 aa5.54□□□□□ -1.52
USP31-201ENST00000219689 KRTAP1-4P0C5Y4 121 aa5.53□□□□□ -1.52
USP31-201ENST00000219689 BSNQ9UPA5 3926 aa5.49□□□□□ -1.53
USP31-201ENST00000219689 LYSTQ99698 3801 aa5.47□□□□□ -1.53
USP31-201ENST00000219689 INE1O15225 51 aa5.47□□□□□ -1.53
USP31-201ENST00000219689 KRTAP10-10P60014 251 aa5.44□□□□□ -1.54
USP31-201ENST00000219689 CMYA5Q8N3K9 4069 aa5.34□□□□□ -1.55
USP31-201ENST00000219689 KRTAP3-1Q9BYR8 98 aa5.34□□□□□ -1.56
USP31-201ENST00000219689 KRTAP10-6P60371 365 aaPredicted RBP5.28□□□□□ -1.56
USP31-201ENST00000219689 ZNF469Q96JG9 3925 aaPredicted RBP5.14□□□□□ -1.59
USP31-201ENST00000219689 KRTAP23-1A1A580 65 aa5.14□□□□□ -1.59
USP31-201ENST00000219689 HECTD4Q9Y4D8 3996 aa5.1□□□□□ -1.59
USP31-201ENST00000219689 DNAH3Q8TD57 4116 aa5.09□□□□□ -1.59
USP31-201ENST00000219689 FRAS1Q86XX4 4008 aa5.09□□□□□ -1.6
USP31-201ENST00000219689 KRTAP3-2Q9BYR7 98 aa5.06□□□□□ -1.6
USP31-201ENST00000219689 DNAH2Q9P225 4427 aa5.01□□□□□ -1.61
USP31-201ENST00000219689 KRTAP3-3Q9BYR6 98 aa5.01□□□□□ -1.61
USP31-201ENST00000219689 DNAH7Q8WXX0 4024 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms