RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 LINC00846Q9NV44 126 aa7.29□□□□□ -1.24
TIMP1-201ENST00000218388 J3QR89 54 aa7.28□□□□□ -1.24
TIMP1-201ENST00000218388 NDUFB1O75438 58 aa7.28□□□□□ -1.24
TIMP1-201ENST00000218388 C9orf92A6NGG3 77 aa7.27□□□□□ -1.25
TIMP1-201ENST00000218388 BPY2O14599 106 aa7.26□□□□□ -1.25
TIMP1-201ENST00000218388 A8MWP4 228 aa7.25□□□□□ -1.25
TIMP1-201ENST00000218388 IGHV6-1A0A0B4J1U7 121 aa7.24□□□□□ -1.25
TIMP1-201ENST00000218388 A0A1B0GVX0 72 aa7.24□□□□□ -1.25
TIMP1-201ENST00000218388 C8orf87E5RJ46 101 aa7.23□□□□□ -1.25
TIMP1-201ENST00000218388 LINC00313P59037 77 aa7.22□□□□□ -1.25
TIMP1-201ENST00000218388 XP32Q5T750 250 aa7.21□□□□□ -1.26
TIMP1-201ENST00000218388 IGKV3D-7A0A0C4DH55 119 aa7.2□□□□□ -1.26
TIMP1-201ENST00000218388 DSCR10P59022 87 aa7.2□□□□□ -1.26
TIMP1-201ENST00000218388 LPAP08519 4548 aa7.2□□□□□ -1.26
TIMP1-201ENST00000218388 PRR15Q8IV56 129 aa7.19□□□□□ -1.26
TIMP1-201ENST00000218388 CXCL6P80162 114 aa7.18□□□□□ -1.26
TIMP1-201ENST00000218388 LRP2P98164 4655 aa7.17□□□□□ -1.26
TIMP1-201ENST00000218388 K7EQZ3 153 aa7.17□□□□□ -1.26
TIMP1-201ENST00000218388 ATP5EP2Q5VTU8 51 aa7.17□□□□□ -1.26
TIMP1-201ENST00000218388 K7ERU9 68 aa7.16□□□□□ -1.26
TIMP1-201ENST00000218388 C8orf17Q9NRJ1 99 aa7.16□□□□□ -1.26
TIMP1-201ENST00000218388 SEC61BP60468 96 aaKnown RBP7.14□□□□□ -1.27
TIMP1-201ENST00000218388 RPL37P61927 97 aaKnown RBP7.13□□□□□ -1.27
TIMP1-201ENST00000218388 Q75L30 129 aa7.13□□□□□ -1.27
TIMP1-201ENST00000218388 NOTCH2NLQ7Z3S9 236 aa7.13□□□□□ -1.27
TIMP1-201ENST00000218388 LINC00643Q86TS7 51 aa7.13□□□□□ -1.27
TIMP1-201ENST00000218388 Q8N9L7 120 aa7.12□□□□□ -1.27
TIMP1-201ENST00000218388 C20orf166-AS1Q96NR2 134 aa7.12□□□□□ -1.27
TIMP1-201ENST00000218388 MMP24-AS1A0A0U1RRL7 71 aa7.11□□□□□ -1.27
TIMP1-201ENST00000218388 KRTAP16-1A8MUX0 517 aa7.11□□□□□ -1.27
TIMP1-201ENST00000218388 hDV103S1A0JD37 113 aa7.1□□□□□ -1.27
TIMP1-201ENST00000218388 A8MUU9 505 aa7.1□□□□□ -1.27
TIMP1-201ENST00000218388 TMEM254Q8TBM7 123 aa7.09□□□□□ -1.27
TIMP1-201ENST00000218388 ATP11AUNQ6ZP68 121 aa7.08□□□□□ -1.28
TIMP1-201ENST00000218388 CASC2Q6XLA1 102 aa7.07□□□□□ -1.28
TIMP1-201ENST00000218388 MRPL34Q9BQ48 92 aaKnown RBP7.07□□□□□ -1.28
TIMP1-201ENST00000218388 HCG22E2RYF7 251 aa7.06□□□□□ -1.28
TIMP1-201ENST00000218388 WFDC13Q8IUB5 93 aa7.06□□□□□ -1.28
TIMP1-201ENST00000218388 UBR4Q5T4S7 5183 aa7.06□□□□□ -1.28
TIMP1-201ENST00000218388 LOC100996750A0A140TA64 210 aa7.05□□□□□ -1.28
TIMP1-201ENST00000218388 HIST1H4AP62805 103 aaKnown RBP7.05□□□□□ -1.28
TIMP1-201ENST00000218388 PCOTHQ58A44 107 aa7.05□□□□□ -1.28
TIMP1-201ENST00000218388 Q8N9P0 234 aaPredicted RBP7.05□□□□□ -1.28
TIMP1-201ENST00000218388 KRTAP4-6Q9BYQ5 205 aa7.05□□□□□ -1.28
TIMP1-201ENST00000218388 MUC17Q685J3 4493 aa7.04□□□□□ -1.28
TIMP1-201ENST00000218388 NDUFS5O43920 106 aa7.02□□□□□ -1.29
TIMP1-201ENST00000218388 ZCCHC13Q8WW36 166 aaKnown RBP6.98□□□□□ -1.29
TIMP1-201ENST00000218388 RNF213Q63HN8 5207 aa6.96□□□□□ -1.3
TIMP1-201ENST00000218388 A0A087WVE0 104 aa6.94□□□□□ -1.3
TIMP1-201ENST00000218388 IMUPQ9GZP8 106 aa6.94□□□□□ -1.3
TIMP1-201ENST00000218388 TP53AIP1Q9HCN2 124 aa6.93□□□□□ -1.3
TIMP1-201ENST00000218388 MT-ATP8P03928 68 aa6.91□□□□□ -1.3
TIMP1-201ENST00000218388 KRTAP4-1Q9BYQ7 146 aa6.89□□□□□ -1.31
TIMP1-201ENST00000218388 H3BS24 57 aa6.88□□□□□ -1.31
TIMP1-201ENST00000218388 A0A0U1RQV1 116 aa6.87□□□□□ -1.31
TIMP1-201ENST00000218388 SCGB1A1P11684 91 aa6.85□□□□□ -1.31
TIMP1-201ENST00000218388 Q5W150 140 aa6.84□□□□□ -1.31
TIMP1-201ENST00000218388 UQCRQO14949 82 aa6.83□□□□□ -1.32
TIMP1-201ENST00000218388 SPINK7P58062 85 aa6.83□□□□□ -1.32
TIMP1-201ENST00000218388 MUC2Q02817 5179 aa6.83□□□□□ -1.32
TIMP1-201ENST00000218388 TRAV22A0A0B4J277 110 aa6.81□□□□□ -1.32
TIMP1-201ENST00000218388 C7orf65Q6ZTY9 151 aa6.81□□□□□ -1.32
TIMP1-201ENST00000218388 FAM236AA0A1B0GUQ0 79 aa6.8□□□□□ -1.32
TIMP1-201ENST00000218388 FAM236BA0A1B0GV22 79 aa6.8□□□□□ -1.32
TIMP1-201ENST00000218388 IGKV2D-30A0A075B6S6 120 aa6.79□□□□□ -1.32
TIMP1-201ENST00000218388 IGKV2-30P06310 120 aa6.79□□□□□ -1.32
TIMP1-201ENST00000218388 ATOX1O00244 68 aa6.78□□□□□ -1.32
TIMP1-201ENST00000218388 OCR1Q9BZK8 76 aa6.77□□□□□ -1.33
TIMP1-201ENST00000218388 RBM12B-AS1Q9P1G2 102 aa6.77□□□□□ -1.33
TIMP1-201ENST00000218388 H0Y9P7 68 aa6.76□□□□□ -1.33
TIMP1-201ENST00000218388 SMIM20Q8N5G0 67 aa6.76□□□□□ -1.33
TIMP1-201ENST00000218388 HRES1P13985 223 aa6.75□□□□□ -1.33
TIMP1-201ENST00000218388 COX6B2Q6YFQ2 88 aa6.75□□□□□ -1.33
TIMP1-201ENST00000218388 LOC101927531A0A1B0GV80 90 aa6.74□□□□□ -1.33
TIMP1-201ENST00000218388 MP68P56378 58 aa6.74□□□□□ -1.33
TIMP1-201ENST00000218388 C5orf47Q569G3 176 aa6.73□□□□□ -1.33
TIMP1-201ENST00000218388 FAM236DA0A1B0GTK5 79 aa6.72□□□□□ -1.33
TIMP1-201ENST00000218388 FAM236CP0DP71 79 aa6.72□□□□□ -1.33
TIMP1-201ENST00000218388 TRAV7A0A075B6U4 112 aa6.7□□□□□ -1.34
TIMP1-201ENST00000218388 MPLKIPQ8TAP9 179 aa6.7□□□□□ -1.34
TIMP1-201ENST00000218388 H3BPC8 53 aa6.69□□□□□ -1.34
TIMP1-201ENST00000218388 KRTAP19-2Q3LHN2 52 aa6.68□□□□□ -1.34
TIMP1-201ENST00000218388 C1orf64Q8NEQ6 169 aa6.68□□□□□ -1.34
TIMP1-201ENST00000218388 LINC00208Q96KT6 92 aa6.68□□□□□ -1.34
TIMP1-201ENST00000218388 CYP4F30PQ9H0H9 118 aa6.68□□□□□ -1.34
TIMP1-201ENST00000218388 FAT4Q6V0I7 4981 aa6.65□□□□□ -1.35
TIMP1-201ENST00000218388 C4orf26Q17RF5 130 aa6.61□□□□□ -1.35
TIMP1-201ENST00000218388 SERP2Q8N6R1 65 aa6.61□□□□□ -1.35
TIMP1-201ENST00000218388 KRTAP4-8Q9BYQ9 185 aa6.6□□□□□ -1.35
TIMP1-201ENST00000218388 MT1HP80294 61 aa6.56□□□□□ -1.36
TIMP1-201ENST00000218388 H1FX-AS1Q4G0G2 97 aa6.56□□□□□ -1.36
TIMP1-201ENST00000218388 M0R2T5 61 aa6.54□□□□□ -1.36
TIMP1-201ENST00000218388 KLKP1Q107X0 134 aa6.54□□□□□ -1.36
TIMP1-201ENST00000218388 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
TIMP1-201ENST00000218388 COX7CP15954 63 aa6.52□□□□□ -1.37
TIMP1-201ENST00000218388 C20orf197Q8N268 126 aa6.52□□□□□ -1.37
TIMP1-201ENST00000218388 ANAPC13Q9BS18 74 aa6.51□□□□□ -1.37
TIMP1-201ENST00000218388 SNURFQ9Y675 71 aa6.5□□□□□ -1.37
TIMP1-201ENST00000218388 A8MUN3 132 aa6.49□□□□□ -1.37
TIMP1-201ENST00000218388 KRTAP3-1Q9BYR8 98 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms