RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 IGFL1Q6UW32 110 aa8.19□□□□□ -1.1
UPK3A-201ENST00000216211 IMUPQ9GZP8 106 aa8.19□□□□□ -1.1
UPK3A-201ENST00000216211 LCE2CQ5TA81 110 aa8.17□□□□□ -1.1
UPK3A-201ENST00000216211 ATP5EP2Q5VTU8 51 aa8.17□□□□□ -1.1
UPK3A-201ENST00000216211 Q6ZVQ6 151 aa8.17□□□□□ -1.1
UPK3A-201ENST00000216211 PCOTHQ58A44 107 aa8.16□□□□□ -1.1
UPK3A-201ENST00000216211 CD164Q04900 197 aa8.14□□□□□ -1.11
UPK3A-201ENST00000216211 LCE2DQ5TA82 110 aaPredicted RBP8.14□□□□□ -1.11
UPK3A-201ENST00000216211 IGKV3D-7A0A0C4DH55 119 aa8.13□□□□□ -1.11
UPK3A-201ENST00000216211 KRTAP19-2Q3LHN2 52 aa8.13□□□□□ -1.11
UPK3A-201ENST00000216211 A0A0G2JQZ4 141 aa8.12□□□□□ -1.11
UPK3A-201ENST00000216211 CXCL6P80162 114 aa8.11□□□□□ -1.11
UPK3A-201ENST00000216211 NREPQ16612 68 aa8.11□□□□□ -1.11
UPK3A-201ENST00000216211 FSIP2Q5CZC0 6907 aa8.11□□□□□ -1.11
UPK3A-201ENST00000216211 MT1HP80294 61 aa8.08□□□□□ -1.12
UPK3A-201ENST00000216211 C1orf195Q5TG92 126 aa8.08□□□□□ -1.12
UPK3A-201ENST00000216211 Q5XG85 94 aa8.08□□□□□ -1.12
UPK3A-201ENST00000216211 A0A087WSZ3 146 aa8.04□□□□□ -1.12
UPK3A-201ENST00000216211 BPY2O14599 106 aa8.03□□□□□ -1.12
UPK3A-201ENST00000216211 PCP4P48539 62 aa8.03□□□□□ -1.12
UPK3A-201ENST00000216211 HIST1H4AP62805 103 aaKnown RBP8.02□□□□□ -1.13
UPK3A-201ENST00000216211 FLGP20930 4061 aaPredicted RBP8.01□□□□□ -1.13
UPK3A-201ENST00000216211 RPL37P61927 97 aaKnown RBP8.01□□□□□ -1.13
UPK3A-201ENST00000216211 CRCT1Q9UGL9 99 aa8.01□□□□□ -1.13
UPK3A-201ENST00000216211 A0A087WVE0 104 aa7.99□□□□□ -1.13
UPK3A-201ENST00000216211 FAM236AA0A1B0GUQ0 79 aa7.99□□□□□ -1.13
UPK3A-201ENST00000216211 FAM236BA0A1B0GV22 79 aa7.99□□□□□ -1.13
UPK3A-201ENST00000216211 LINC00472Q9H8W2 130 aa7.97□□□□□ -1.13
UPK3A-201ENST00000216211 IGKV4-1P06312 121 aa7.96□□□□□ -1.14
UPK3A-201ENST00000216211 DSCR10P59022 87 aa7.96□□□□□ -1.14
UPK3A-201ENST00000216211 SS18L2Q9UHA2 77 aa7.96□□□□□ -1.14
UPK3A-201ENST00000216211 LORP23490 312 aaPredicted RBP7.95□□□□□ -1.14
UPK3A-201ENST00000216211 KRTAP10-6P60371 365 aaPredicted RBP7.95□□□□□ -1.14
UPK3A-201ENST00000216211 J3KT08 172 aa7.93□□□□□ -1.14
UPK3A-201ENST00000216211 M0R2T5 61 aa7.93□□□□□ -1.14
UPK3A-201ENST00000216211 ATOX1O00244 68 aa7.93□□□□□ -1.14
UPK3A-201ENST00000216211 ANAPC13Q9BS18 74 aa7.93□□□□□ -1.14
UPK3A-201ENST00000216211 COX6B2Q6YFQ2 88 aa7.92□□□□□ -1.14
UPK3A-201ENST00000216211 Q8N9L7 120 aa7.92□□□□□ -1.14
UPK3A-201ENST00000216211 Q96NJ1 140 aa7.91□□□□□ -1.14
UPK3A-201ENST00000216211 DEFB116Q30KQ4 102 aa7.9□□□□□ -1.14
UPK3A-201ENST00000216211 A8MWP4 228 aa7.88□□□□□ -1.15
UPK3A-201ENST00000216211 K7EQZ3 153 aa7.88□□□□□ -1.15
UPK3A-201ENST00000216211 PRR15Q8IV56 129 aa7.86□□□□□ -1.15
UPK3A-201ENST00000216211 SMIM20Q8N5G0 67 aa7.84□□□□□ -1.15
UPK3A-201ENST00000216211 NDUFB1O75438 58 aa7.83□□□□□ -1.16
UPK3A-201ENST00000216211 ATP11AUNQ6ZP68 121 aa7.82□□□□□ -1.16
UPK3A-201ENST00000216211 Q75L30 129 aa7.82□□□□□ -1.16
UPK3A-201ENST00000216211 SERP2Q8N6R1 65 aa7.82□□□□□ -1.16
UPK3A-201ENST00000216211 HCG22E2RYF7 251 aa7.81□□□□□ -1.16
UPK3A-201ENST00000216211 COX7CP15954 63 aa7.8□□□□□ -1.16
UPK3A-201ENST00000216211 TRAV7A0A075B6U4 112 aa7.79□□□□□ -1.16
UPK3A-201ENST00000216211 A0A1B0GVX0 72 aa7.78□□□□□ -1.16
UPK3A-201ENST00000216211 UQCRQO14949 82 aa7.78□□□□□ -1.16
UPK3A-201ENST00000216211 MMP24-AS1A0A0U1RRL7 71 aa7.76□□□□□ -1.17
UPK3A-201ENST00000216211 CCDC179H3BU77 68 aa7.76□□□□□ -1.17
UPK3A-201ENST00000216211 OCR1Q9BZK8 76 aa7.76□□□□□ -1.17
UPK3A-201ENST00000216211 CASC2Q6XLA1 102 aa7.75□□□□□ -1.17
UPK3A-201ENST00000216211 WFDC13Q8IUB5 93 aa7.74□□□□□ -1.17
UPK3A-201ENST00000216211 C8orf17Q9NRJ1 99 aa7.74□□□□□ -1.17
UPK3A-201ENST00000216211 IGHV6-1A0A0B4J1U7 121 aa7.72□□□□□ -1.17
UPK3A-201ENST00000216211 hDV103S1A0JD37 113 aa7.71□□□□□ -1.18
UPK3A-201ENST00000216211 C20orf166-AS1Q96NR2 134 aa7.71□□□□□ -1.18
UPK3A-201ENST00000216211 A8MUU9 505 aa7.7□□□□□ -1.18
UPK3A-201ENST00000216211 C8orf87E5RJ46 101 aa7.7□□□□□ -1.18
UPK3A-201ENST00000216211 TMEM254Q8TBM7 123 aa7.68□□□□□ -1.18
UPK3A-201ENST00000216211 NOTCH2NLQ7Z3S9 236 aa7.67□□□□□ -1.18
UPK3A-201ENST00000216211 MRPL34Q9BQ48 92 aaKnown RBP7.65□□□□□ -1.18
UPK3A-201ENST00000216211 LINC00313P59037 77 aa7.63□□□□□ -1.19
UPK3A-201ENST00000216211 C5orf47Q569G3 176 aa7.63□□□□□ -1.19
UPK3A-201ENST00000216211 C20orf197Q8N268 126 aa7.63□□□□□ -1.19
UPK3A-201ENST00000216211 USH2AO75445 5202 aa7.62□□□□□ -1.19
UPK3A-201ENST00000216211 KLKP1Q107X0 134 aa7.62□□□□□ -1.19
UPK3A-201ENST00000216211 TP53AIP1Q9HCN2 124 aa7.62□□□□□ -1.19
UPK3A-201ENST00000216211 KRTAP9-8Q9BYQ0 159 aa7.61□□□□□ -1.19
UPK3A-201ENST00000216211 SSPOA2VEC9 5147 aa7.59□□□□□ -1.19
UPK3A-201ENST00000216211 KRTAP16-1A8MUX0 517 aa7.59□□□□□ -1.19
UPK3A-201ENST00000216211 CYSTM1Q9H1C7 97 aa7.57□□□□□ -1.2
UPK3A-201ENST00000216211 H3BPC8 53 aa7.56□□□□□ -1.2
UPK3A-201ENST00000216211 Q8N9P0 234 aaPredicted RBP7.56□□□□□ -1.2
UPK3A-201ENST00000216211 SNURFQ9Y675 71 aa7.56□□□□□ -1.2
UPK3A-201ENST00000216211 NDUFS5O43920 106 aa7.55□□□□□ -1.2
UPK3A-201ENST00000216211 MP68P56378 58 aa7.55□□□□□ -1.2
UPK3A-201ENST00000216211 FAM236DA0A1B0GTK5 79 aa7.54□□□□□ -1.2
UPK3A-201ENST00000216211 H0Y9P7 68 aa7.54□□□□□ -1.2
UPK3A-201ENST00000216211 NDUFC1O43677 76 aa7.54□□□□□ -1.2
UPK3A-201ENST00000216211 FAM236CP0DP71 79 aa7.54□□□□□ -1.2
UPK3A-201ENST00000216211 ZCCHC13Q8WW36 166 aaKnown RBP7.54□□□□□ -1.2
UPK3A-201ENST00000216211 TRAV22A0A0B4J277 110 aa7.52□□□□□ -1.21
UPK3A-201ENST00000216211 H7BZZ5 65 aa7.51□□□□□ -1.21
UPK3A-201ENST00000216211 MT2AP02795 61 aa7.5□□□□□ -1.21
UPK3A-201ENST00000216211 HRES1P13985 223 aa7.5□□□□□ -1.21
UPK3A-201ENST00000216211 TMEM258P61165 79 aa7.49□□□□□ -1.21
UPK3A-201ENST00000216211 LINC00208Q96KT6 92 aa7.49□□□□□ -1.21
UPK3A-201ENST00000216211 MPLKIPQ8TAP9 179 aa7.48□□□□□ -1.21
UPK3A-201ENST00000216211 RBM12B-AS1Q9P1G2 102 aa7.48□□□□□ -1.21
UPK3A-201ENST00000216211 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.47□□□□□ -1.21
UPK3A-201ENST00000216211 C1orf64Q8NEQ6 169 aa7.47□□□□□ -1.21
UPK3A-201ENST00000216211 Q5W150 140 aa7.46□□□□□ -1.22
UPK3A-201ENST00000216211 MT1FP04733 61 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms