RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 C5orf47Q569G3 176 aa8.29□□□□□ -1.08
RTFDC1-201ENST00000023939 EPPK1P58107 5090 aaKnown RBP8.29□□□□□ -1.08
RTFDC1-201ENST00000023939 hDV103S1A0JD37 113 aa8.28□□□□□ -1.08
RTFDC1-201ENST00000023939 SVIPQ8NHG7 77 aa8.28□□□□□ -1.08
RTFDC1-201ENST00000023939 H7BZZ5 65 aa8.27□□□□□ -1.09
RTFDC1-201ENST00000023939 SNURFQ9Y675 71 aa8.27□□□□□ -1.09
RTFDC1-201ENST00000023939 TYMSOSQ8TAI1 123 aa8.26□□□□□ -1.09
RTFDC1-201ENST00000023939 LIMD2Q9BT23 127 aa8.26□□□□□ -1.09
RTFDC1-201ENST00000023939 APOBP04114 4563 aaKnown RBP8.25□□□□□ -1.09
RTFDC1-201ENST00000023939 IGHV6-1A0A0B4J1U7 121 aa8.25□□□□□ -1.09
RTFDC1-201ENST00000023939 SPINK1P00995 79 aa8.23□□□□□ -1.09
RTFDC1-201ENST00000023939 C1orf195Q5TG92 126 aa8.23□□□□□ -1.09
RTFDC1-201ENST00000023939 RPS29P62273 56 aaKnown RBP8.23□□□□□ -1.09
RTFDC1-201ENST00000023939 ZCCHC13Q8WW36 166 aaKnown RBP8.23□□□□□ -1.09
RTFDC1-201ENST00000023939 C8orf87E5RJ46 101 aa8.21□□□□□ -1.09
RTFDC1-201ENST00000023939 TP53AIP1Q9HCN2 124 aa8.21□□□□□ -1.09
RTFDC1-201ENST00000023939 SPAG11AQ6PDA7 123 aa8.2□□□□□ -1.1
RTFDC1-201ENST00000023939 PRR26Q8N8Z3 221 aa8.2□□□□□ -1.1
RTFDC1-201ENST00000023939 H3BPC8 53 aa8.2□□□□□ -1.1
RTFDC1-201ENST00000023939 BIRC6Q9NR09 4857 aa8.19□□□□□ -1.1
RTFDC1-201ENST00000023939 MP68P56378 58 aa8.19□□□□□ -1.1
RTFDC1-201ENST00000023939 NOTCH2NLQ7Z3S9 236 aa8.19□□□□□ -1.1
RTFDC1-201ENST00000023939 MRPL34Q9BQ48 92 aaKnown RBP8.19□□□□□ -1.1
RTFDC1-201ENST00000023939 LINC00304Q8N9R0 145 aa8.18□□□□□ -1.1
RTFDC1-201ENST00000023939 FAM236DA0A1B0GTK5 79 aa8.17□□□□□ -1.1
RTFDC1-201ENST00000023939 FAM236CP0DP71 79 aa8.17□□□□□ -1.1
RTFDC1-201ENST00000023939 FAM229AH3BQW9 127 aa8.15□□□□□ -1.1
RTFDC1-201ENST00000023939 RPS28P62857 69 aaKnown RBP8.15□□□□□ -1.1
RTFDC1-201ENST00000023939 H0Y9P7 68 aa8.15□□□□□ -1.11
RTFDC1-201ENST00000023939 ATP5EP56381 51 aaPredicted RBP8.15□□□□□ -1.11
RTFDC1-201ENST00000023939 TRAV22A0A0B4J277 110 aa8.14□□□□□ -1.11
RTFDC1-201ENST00000023939 FAT1Q14517 4588 aa8.12□□□□□ -1.11
RTFDC1-201ENST00000023939 LINC00313P59037 77 aa8.12□□□□□ -1.11
RTFDC1-201ENST00000023939 LINC00208Q96KT6 92 aa8.11□□□□□ -1.11
RTFDC1-201ENST00000023939 NDUFS5O43920 106 aa8.09□□□□□ -1.11
RTFDC1-201ENST00000023939 C1orf64Q8NEQ6 169 aa8.08□□□□□ -1.12
RTFDC1-201ENST00000023939 Q8N9P0 234 aaPredicted RBP8.07□□□□□ -1.12
RTFDC1-201ENST00000023939 KRTAP16-1A8MUX0 517 aa8.06□□□□□ -1.12
RTFDC1-201ENST00000023939 Q5VSD8 79 aa8.06□□□□□ -1.12
RTFDC1-201ENST00000023939 SERP1Q9Y6X1 66 aa8.05□□□□□ -1.12
RTFDC1-201ENST00000023939 KRTAP13-3Q3SY46 172 aa8.04□□□□□ -1.12
RTFDC1-201ENST00000023939 PKHD1L1Q86WI1 4243 aa8.03□□□□□ -1.12
RTFDC1-201ENST00000023939 LCE2AQ5TA79 106 aaPredicted RBP8.02□□□□□ -1.13
RTFDC1-201ENST00000023939 LCE2CQ5TA81 110 aa8.02□□□□□ -1.13
RTFDC1-201ENST00000023939 SPANXA2-OT1Q8N9U9 137 aa8.01□□□□□ -1.13
RTFDC1-201ENST00000023939 KRTAP10-8P60410 259 aa8□□□□□ -1.13
RTFDC1-201ENST00000023939 Q5W150 140 aa8□□□□□ -1.13
RTFDC1-201ENST00000023939 CYP4F30PQ9H0H9 118 aa8□□□□□ -1.13
RTFDC1-201ENST00000023939 RYR1P21817 5038 aa7.99□□□□□ -1.13
RTFDC1-201ENST00000023939 HSPG2P98160 4391 aa7.99□□□□□ -1.13
RTFDC1-201ENST00000023939 LOC101927531A0A1B0GV80 90 aa7.98□□□□□ -1.13
RTFDC1-201ENST00000023939 OXTP01178 125 aa7.98□□□□□ -1.13
RTFDC1-201ENST00000023939 Q8N1X5 172 aa7.95□□□□□ -1.14
RTFDC1-201ENST00000023939 KRTAP17-1Q9BYP8 105 aa7.95□□□□□ -1.14
RTFDC1-201ENST00000023939 IGLV7-46A0A075B6I9 117 aa7.92□□□□□ -1.14
RTFDC1-201ENST00000023939 HERC2O95714 4834 aa7.9□□□□□ -1.14
RTFDC1-201ENST00000023939 KIAA1109Q2LD37 5005 aa7.89□□□□□ -1.15
RTFDC1-201ENST00000023939 PCOTHQ58A44 107 aa7.89□□□□□ -1.15
RTFDC1-201ENST00000023939 FLG2Q5D862 2391 aaPredicted RBP7.88□□□□□ -1.15
RTFDC1-201ENST00000023939 SMIM26A0A096LP01 95 aa7.87□□□□□ -1.15
RTFDC1-201ENST00000023939 IGKV2-30P06310 120 aa7.87□□□□□ -1.15
RTFDC1-201ENST00000023939 PRR4Q16378 134 aa7.86□□□□□ -1.15
RTFDC1-201ENST00000023939 C20orf166-AS1Q96NR2 134 aa7.86□□□□□ -1.15
RTFDC1-201ENST00000023939 A8MUU9 505 aa7.85□□□□□ -1.15
RTFDC1-201ENST00000023939 RETNLBQ9BQ08 111 aa7.85□□□□□ -1.15
RTFDC1-201ENST00000023939 FP248Q71RG6 208 aaPredicted RBP7.83□□□□□ -1.16
RTFDC1-201ENST00000023939 MT1HL1P0DM35 61 aa7.83□□□□□ -1.16
RTFDC1-201ENST00000023939 TNXBP22105 4242 aa7.82□□□□□ -1.16
RTFDC1-201ENST00000023939 C9orf92A6NGG3 77 aa7.81□□□□□ -1.16
RTFDC1-201ENST00000023939 LRP1Q07954 4544 aaKnown RBP7.79□□□□□ -1.16
RTFDC1-201ENST00000023939 LORP23490 312 aaPredicted RBP7.79□□□□□ -1.16
RTFDC1-201ENST00000023939 PCLOQ9Y6V0 5065 aa7.78□□□□□ -1.16
RTFDC1-201ENST00000023939 FAT3Q8TDW7 4589 aa7.78□□□□□ -1.16
RTFDC1-201ENST00000023939 HRES1P13985 223 aa7.77□□□□□ -1.17
RTFDC1-201ENST00000023939 Q75L30 129 aa7.75□□□□□ -1.17
RTFDC1-201ENST00000023939 IGKV2D-30A0A075B6S6 120 aa7.74□□□□□ -1.17
RTFDC1-201ENST00000023939 COA5Q86WW8 74 aa7.74□□□□□ -1.17
RTFDC1-201ENST00000023939 C7orf65Q6ZTY9 151 aa7.72□□□□□ -1.17
RTFDC1-201ENST00000023939 DMAC1Q96GE9 116 aa7.72□□□□□ -1.17
RTFDC1-201ENST00000023939 KRTAP4-5Q9BYR2 181 aa7.72□□□□□ -1.17
RTFDC1-201ENST00000023939 ACYP2P14621 99 aa7.68□□□□□ -1.18
RTFDC1-201ENST00000023939 C4orf26Q17RF5 130 aa7.68□□□□□ -1.18
RTFDC1-201ENST00000023939 Q1T7F1 81 aa7.68□□□□□ -1.18
RTFDC1-201ENST00000023939 DMBT1Q9UGM3 2413 aaPredicted RBP7.68□□□□□ -1.18
RTFDC1-201ENST00000023939 ABCA13Q86UQ4 5058 aa7.67□□□□□ -1.18
RTFDC1-201ENST00000023939 MPLKIPQ8TAP9 179 aa7.64□□□□□ -1.19
RTFDC1-201ENST00000023939 V9GYY9 64 aa7.64□□□□□ -1.19
RTFDC1-201ENST00000023939 RPL37P61927 97 aaKnown RBP7.63□□□□□ -1.19
RTFDC1-201ENST00000023939 XP32Q5T750 250 aa7.61□□□□□ -1.19
RTFDC1-201ENST00000023939 SPINK7P58062 85 aa7.6□□□□□ -1.19
RTFDC1-201ENST00000023939 ATP11AUNQ6ZP68 121 aa7.6□□□□□ -1.19
RTFDC1-201ENST00000023939 MYCBP2O75592 4640 aa7.59□□□□□ -1.19
RTFDC1-201ENST00000023939 A8MUN3 132 aa7.59□□□□□ -1.19
RTFDC1-201ENST00000023939 TPRXLQ17RH7 258 aa7.56□□□□□ -1.2
RTFDC1-201ENST00000023939 CHKB-CPT1BH3BT56 60 aa7.53□□□□□ -1.2
RTFDC1-201ENST00000023939 LINC01558Q9Y6Z2 57 aa7.52□□□□□ -1.21
RTFDC1-201ENST00000023939 PRO0628Q9UI54 55 aa7.5□□□□□ -1.21
RTFDC1-201ENST00000023939 KRTAP3-1Q9BYR8 98 aa7.47□□□□□ -1.21
RTFDC1-201ENST00000023939 PSPHP1O15172 72 aa7.47□□□□□ -1.21
RTFDC1-201ENST00000023939 COX6B2Q6YFQ2 88 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms