RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Tcrg-V6A0A075B5Y8 134 aa10.55□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Prr3Q811B5 190 aaKnown RBP10.55□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Pth2Q91W27 100 aa10.55□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Ash1lQ99MY8 2958 aa10.55□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Ighv5-6A0A075B5Q0 117 aa10.55□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Ighv1-80A0A075B5Y3 117 aa10.55□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Hist1h2bfP10853 126 aa10.55□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Rps20P60867 119 aaKnown RBP10.55□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Tmem256Q5F285 113 aa10.55□□□□□ -0.72
Clcn3-204ENSMUST00000110301 CrygcQ61597 174 aa10.55□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Hist1h2bbQ64475 126 aa10.55□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Gm9961Q8BNV2 113 aa10.55□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Saxo2Q8BQB6 394 aa10.55□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Hist1h2bkQ8CGP1 126 aaKnown RBP10.55□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Hist1h2bpQ8CGP2 126 aaKnown RBP10.55□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Tmed6Q9CQG0 239 aa10.55□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Cxcl14Q9WUQ5 99 aa10.55□□□□□ -0.72
Clcn3-204ENSMUST00000110301 P0C1Z5 52 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Fxyd7P59648 80 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Ypel3P61237 119 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Fam19a2Q7TPG7 131 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 D630044L22RikQ8C701 164 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Olfr954Q9EQB6 314 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Trdv1A0A075B657 112 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Zfp950A0A0U1RQ46 609 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Gm5105Q8C6Y9 112 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Gm9958Q8C9U4 106 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Gm13030A2APQ6 143 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Gm15293D3YX02 93 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Zfp983E9PUT0 460 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 PigyP0C1P0 71 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 NdpP48744 131 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Wfdc21Q8BTE6 63 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Hist3h2bbQ8CGP0 126 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Hist3h2baQ9D2U9 126 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Epg5Q80TA9 2572 aa10.54□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Gm5129F6YHA9 99 aa10.53□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Nbl1Q61477 178 aa10.53□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Sox21Q811W0 276 aa10.53□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Ighv8-2A0A0A6YW58 119 aa10.53□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Fgf5P15656 264 aa10.53□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Khdc1cQ4KL78 166 aa10.53□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Vmn1r70Q8R254 298 aa10.53□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Leprotl1Q9CQ74 131 aa10.53□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Polr3kQ9CQZ7 108 aa10.53□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Trav7n-4A0A075B620 113 aa10.53□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Iglv1A0A075B663 117 aa10.53□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Scgb1b3J3QJY4 93 aa10.53□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Rbfox3Q8BIF2 374 aa10.53□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Gm6904E9PVF1 202 aa10.53□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Gm16686Q3UMN9 131 aa10.53□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Olfr235E9Q9Z6 312 aa10.52□□□□□ -0.72
Clcn3-204ENSMUST00000110301 P01727 129 aa10.52□□□□□ -0.72
Clcn3-204ENSMUST00000110301 MymxQ2Q5T5 84 aa10.52□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Ormdl3Q9CPZ6 153 aa10.52□□□□□ -0.72
Clcn3-204ENSMUST00000110301 LbhQ9CX60 105 aa10.52□□□□□ -0.72
Clcn3-204ENSMUST00000110301 Cks1brtQ3UNC9 96 aa10.52□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Olfr1323Q8VF35 309 aa10.52□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Ighv3-8A0A075B5T0 131 aa10.52□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Gm15557A6PWY0 234 aa10.52□□□□□ -0.73
Clcn3-204ENSMUST00000110301 P01659 112 aa10.52□□□□□ -0.73
Clcn3-204ENSMUST00000110301 P01812 117 aa10.52□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Olfr317Q5NCD6 327 aa10.52□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Olfr1381Q7TQT4 311 aa10.52□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Olfr1012Q8VFJ7 311 aa10.52□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Zfp119aQ9JIC0 545 aa10.52□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Prrc2aQ7TSC1 2158 aaKnown RBP10.51□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Trbv3A0A0A6YYE2 117 aa10.51□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Cdx4Q07424 282 aa10.51□□□□□ -0.73
Clcn3-204ENSMUST00000110301 5730522E02RikQ5SP45 163 aa10.51□□□□□ -0.73
Clcn3-204ENSMUST00000110301 AamdcQ8R0P4 122 aa10.51□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Ifitm2Q99J93 144 aa10.51□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Tomm40Q9QYA2 361 aa10.51□□□□□ -0.73
Clcn3-204ENSMUST00000110301 TctaQ8VEA7 122 aa10.51□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Tm4sf19E9Q9H8 206 aa10.5□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Bak1O08734 209 aa10.5□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Ighv1-62-3P01754 117 aa10.5□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Hnrnpa3Q8BG05 379 aaKnown RBP10.5□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Tctex1d4Q8CDY7 219 aa10.5□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Gm10203F6QJ09 66 aa10.5□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Crip1P63254 77 aa10.5□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Znf575Q3TXZ1 239 aa10.5□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Q9DAA3 117 aa10.5□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Ighv1-74A0A0G2JGK2 117 aa10.5□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Esp3J3QN49 87 aa10.5□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Olfr1404Q8VGE1 313 aa10.5□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Dusp14Q9JLY7 198 aa10.5□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Cep192E9Q4Y4 2514 aaKnown RBP10.5□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Wdfy3Q6VNB8 3508 aa10.5□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Ccl17F6R5P4 103 aa10.49□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Dmrtc2Q8CGW9 370 aa10.49□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Malsu1Q9CWV0 228 aa10.49□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Pex7P97865 318 aa10.49□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Znf329Q6GQR8 522 aa10.49□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Olfr1437Q7TQR7 312 aa10.49□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Map1lc3aQ91VR7 121 aa10.49□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Spata45Q9CVW4 97 aa10.49□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Gm12057A0A087WR21 115 aa10.49□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Gm21874J3QNZ6 232 aa10.49□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Bsph1Q3UW26 133 aa10.49□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 74.7 ms