RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Cox6b1P56391 86 aaKnown RBP11.28□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Mbd6Q3TY92 1003 aa11.28□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Gm10188Q3V432 135 aa11.28□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Socs3O35718 225 aa11.27□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Stpg1Q9D2F5 341 aa11.27□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Atg2bQ80XK6 2075 aa11.27□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Cep290Q6A078 2472 aa11.27□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Cox6a1P43024 111 aa11.27□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Igll1P20764 209 aa11.27□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Pygo1Q9D0P5 417 aa11.27□□□□□ -0.61
Col3a1-201ENSMUST00000087883 BC035044E0CXF8 138 aa11.27□□□□□ -0.61
Col3a1-201ENSMUST00000087883 P01812 117 aa11.27□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Rpl32-psP17932 135 aa11.27□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Fam240bJ3QMB3 78 aa11.27□□□□□ -0.61
Col3a1-201ENSMUST00000087883 LeprotO89013 131 aa11.27□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Tnfrsf26P83626 204 aa11.27□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Zfp648D3Z0W3 525 aa11.26□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Inafm1E9PV59 130 aa11.26□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Sigmar1O55242 223 aa11.26□□□□□ -0.61
Col3a1-201ENSMUST00000087883 P04946 108 aa11.26□□□□□ -0.61
Col3a1-201ENSMUST00000087883 RhohQ9D3G9 191 aa11.26□□□□□ -0.61
Col3a1-201ENSMUST00000087883 OtofQ9ESF1 1997 aa11.26□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Zfp36P22893 319 aaKnown RBP11.26□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Gm26558Q8BLW8 286 aa11.26□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Igkv3-2A0A075B5P0 119 aa11.26□□□□□ -0.61
Col3a1-201ENSMUST00000087883 P01789 122 aa11.26□□□□□ -0.61
Col3a1-201ENSMUST00000087883 H2-DMb1P35737 261 aa11.26□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Tpsab1Q02844 273 aa11.26□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Rnf166Q3U9F6 237 aa11.26□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Parm1Q923D3 296 aa11.26□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Pip4p2Q9CZX7 257 aa11.26□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Gm7075D3Z497 112 aa11.25□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Atp6v0e1Q9CQD8 81 aa11.25□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Gm28038F7BCN9 126 aa11.25□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Gatd1Q8BFQ8 220 aa11.25□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Gm33815A0A087WNV3 176 aa11.25□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Ttc9cQ810A3 171 aa11.25□□□□□ -0.61
Col3a1-201ENSMUST00000087883 OtosQ8R448 89 aa11.25□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Gm15093A2BI72 449 aa11.25□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Gm15097E9QA14 449 aa11.25□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Ca1P13634 261 aa11.25□□□□□ -0.61
Col3a1-201ENSMUST00000087883 P01741 114 aa11.25□□□□□ -0.61
Col3a1-201ENSMUST00000087883 P0C1Z5 52 aa11.25□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Tex26Q0VB26 296 aa11.25□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Clec4b2Q67DU8 208 aa11.25□□□□□ -0.61
Col3a1-201ENSMUST00000087883 COA4Q8BT51 87 aa11.25□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Col11a1Q61245 1804 aa11.25□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Ralgapa1Q6GYP7 2035 aa11.24□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Trav14n-2A0A0G2JDF5 121 aa11.24□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Ly6c1P0CW02 131 aa11.24□□□□□ -0.61
Col3a1-201ENSMUST00000087883 MplkipQ9D011 178 aa11.24□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Ly86O88188 162 aa11.24□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Defa21Q8C1P2 93 aa11.24□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Mcm3apQ9WUU9 1971 aa11.24□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Gm28778A0A087WSK7 233 aa11.24□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Gm5294J3QP53 216 aa11.24□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Mrps21P58059 87 aa11.24□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Gm10881P01642 115 aa11.24□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Prok2Q9QXU7 128 aa11.23□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Gm45861A0A1B0GRY3 1923 aa11.23□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Vmo1Q5SXG7 201 aa11.23□□□□□ -0.61
Col3a1-201ENSMUST00000087883 E130218I03RikA0A0U1RNU5 63 aa11.23□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Runx1Q03347 451 aa11.23□□□□□ -0.61
Col3a1-201ENSMUST00000087883 H1fxQ80ZM5 188 aa11.23□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Trav14d-3-dv8A0A075B619 120 aa11.23□□□□□ -0.61
Col3a1-201ENSMUST00000087883 B230307C23RikQ8BLB2 64 aa11.23□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Taf15Q8BQ46 557 aaKnown RBP11.23□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Dennd4aE9Q8V6 1869 aa11.23□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Gm9747Q810H1 104 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Arid2E9Q7E2 1828 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Ang2Q64438 145 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Leap2Q91V13 76 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Igkv4-59A0A0B4J1I8 117 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 1700084M14RikB1AT01 78 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Tcl1b4P56844 120 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 A930003A15RikQ3U552 87 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Pom121l2Q5SW25 972 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Ighv6-7A0A0A6YWU3 119 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Igkv4-61A0A0G2JH00 117 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 H2al1jA2BFR3 109 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Gm12830F6XVH0 157 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 ElaneQ3UP87 265 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Msrb2Q78J03 175 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Igkv4-81A0A0G2JEY5 119 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Vopp1Q8R1C3 172 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Pfn2Q9JJV2 140 aa11.22□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Tal2Q62282 108 aa11.21□□□□□ -0.61
Col3a1-201ENSMUST00000087883 Dock10Q8BZN6 2150 aa11.21□□□□□ -0.61
Col3a1-201ENSMUST00000087883 P01793 123 aa11.21□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Trav14-3A0A075B607 120 aa11.21□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Smim26Q3V460 107 aa11.21□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Foxi1Q922I5 372 aa11.21□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Lrrk1Q3UHC2 2014 aa11.21□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Trav14-2A0A075B694 121 aa11.2□□□□□ -0.62
Col3a1-201ENSMUST00000087883 A0A1L1SR50 188 aa11.2□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Cd300eQ8K249 196 aa11.2□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Igkv3-1A0A075B5P1 119 aa11.2□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Igkv4-63A0A0G2JFU6 117 aa11.2□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Gm2564F6Z9S8 108 aa11.2□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Ccl19O70460 108 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 59 ms