RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 BC030500E9Q6W0 185 aa11.67□□□□□ -0.54
Nup54-201ENSMUST00000038514 Olfr235E9Q9Z6 312 aa11.67□□□□□ -0.54
Nup54-201ENSMUST00000038514 Svs5P30933 122 aa11.67□□□□□ -0.54
Nup54-201ENSMUST00000038514 Tdgf1P51865 171 aa11.67□□□□□ -0.54
Nup54-201ENSMUST00000038514 Tmem88bQ3TYP4 173 aa11.67□□□□□ -0.54
Nup54-201ENSMUST00000038514 Snrnp40Q6PE01 358 aa11.67□□□□□ -0.54
Nup54-201ENSMUST00000038514 Ube2l6Q9QZU9 153 aa11.67□□□□□ -0.54
Nup54-201ENSMUST00000038514 Ighv6-7A0A0A6YWU3 119 aa11.66□□□□□ -0.54
Nup54-201ENSMUST00000038514 Esp38A8R0X1 80 aa11.66□□□□□ -0.54
Nup54-201ENSMUST00000038514 Gm2174F6ZVF2 133 aa11.66□□□□□ -0.54
Nup54-201ENSMUST00000038514 G0s2Q61585 103 aa11.66□□□□□ -0.54
Nup54-201ENSMUST00000038514 Olfr553Q7TRS6 326 aa11.66□□□□□ -0.54
Nup54-201ENSMUST00000038514 Rnf185Q91YT2 192 aa11.66□□□□□ -0.54
Nup54-201ENSMUST00000038514 Tctex1d1Q9D5I4 173 aa11.66□□□□□ -0.54
Nup54-201ENSMUST00000038514 Hspb8Q9JK92 196 aa11.66□□□□□ -0.54
Nup54-201ENSMUST00000038514 Arpc1aQ9R0Q6 370 aa11.66□□□□□ -0.54
Nup54-201ENSMUST00000038514 Ighv9-1A0A0B4J1P3 117 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 PdpnQ62011 172 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 Wfdc21Q8BTE6 63 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 Olfr981Q8VEU2 310 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 Olfr873Q8VFJ0 319 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 Q9D131 166 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 Ttc32Q9DAC7 148 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 Gvin1Q80SU7 2427 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 Ighv8-8A0A0A6YXQ0 119 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 Ighv1-77A0A0G2JGS9 117 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 Tmem29A2ANF5 204 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 Nsun4C4P6S0 806 aaKnown RBP11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 Gp9O88186 177 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 Adrb3P25962 400 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 Gm5150Q1AN92 299 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 Gm10604Q3V0X7 143 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 Ndufc2Q9CQ54 120 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 Znhit3Q9CQK1 151 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 CklfQ9DAS1 152 aa11.65□□□□□ -0.54
Nup54-201ENSMUST00000038514 P01756 117 aa11.64□□□□□ -0.55
Nup54-201ENSMUST00000038514 P01757 117 aa11.64□□□□□ -0.55
Nup54-201ENSMUST00000038514 Pxt1Q8K459 51 aa11.64□□□□□ -0.55
Nup54-201ENSMUST00000038514 Rbms1Q91W59 403 aaKnown RBP11.64□□□□□ -0.55
Nup54-201ENSMUST00000038514 Tmem210Q9D2F0 147 aa11.64□□□□□ -0.55
Nup54-201ENSMUST00000038514 Gm5157A0A087WRH8 301 aa11.64□□□□□ -0.55
Nup54-201ENSMUST00000038514 Ighv1-31A0A0A6YWK5 117 aa11.64□□□□□ -0.55
Nup54-201ENSMUST00000038514 H2-DMb1P35737 261 aa11.64□□□□□ -0.55
Nup54-201ENSMUST00000038514 Srsf2Q62093 221 aaKnown RBP11.64□□□□□ -0.55
Nup54-201ENSMUST00000038514 Slc35d2Q762D5 326 aa11.64□□□□□ -0.55
Nup54-201ENSMUST00000038514 RpeQ8VEE0 228 aa11.64□□□□□ -0.55
Nup54-201ENSMUST00000038514 Mrpl33Q9CQP0 65 aa11.64□□□□□ -0.55
Nup54-201ENSMUST00000038514 Gtsf1lQ9CWD0 151 aa11.64□□□□□ -0.55
Nup54-201ENSMUST00000038514 Wfdc2Q9DAU7 174 aa11.64□□□□□ -0.55
Nup54-201ENSMUST00000038514 Zzef1Q5SSH7 2924 aa11.63□□□□□ -0.55
Nup54-201ENSMUST00000038514 Olfr365Q8VFT2 312 aa11.63□□□□□ -0.55
Nup54-201ENSMUST00000038514 Fmc1Q9CR13 113 aa11.63□□□□□ -0.55
Nup54-201ENSMUST00000038514 Tmem141A2AJB2 108 aa11.63□□□□□ -0.55
Nup54-201ENSMUST00000038514 7420426K07RikQ3UX66 186 aa11.63□□□□□ -0.55
Nup54-201ENSMUST00000038514 Vwc2lQ505H4 222 aa11.63□□□□□ -0.55
Nup54-201ENSMUST00000038514 Cd52Q64389 74 aa11.63□□□□□ -0.55
Nup54-201ENSMUST00000038514 Snx22Q8C084 192 aa11.63□□□□□ -0.55
Nup54-201ENSMUST00000038514 D630044L22RikQ8C701 164 aa11.63□□□□□ -0.55
Nup54-201ENSMUST00000038514 NpbQ8K4P1 119 aa11.63□□□□□ -0.55
Nup54-201ENSMUST00000038514 Trav14-2A0A075B694 121 aa11.62□□□□□ -0.55
Nup54-201ENSMUST00000038514 Smim13E9Q942 88 aa11.62□□□□□ -0.55
Nup54-201ENSMUST00000038514 Defa9P50707 93 aa11.62□□□□□ -0.55
Nup54-201ENSMUST00000038514 Map1lc3aQ91VR7 121 aa11.62□□□□□ -0.55
Nup54-201ENSMUST00000038514 Mrpl16Q99N93 251 aa11.62□□□□□ -0.55
Nup54-201ENSMUST00000038514 Gnb1lQ9EQ15 326 aa11.62□□□□□ -0.55
Nup54-201ENSMUST00000038514 Psmg4P0C7N9 123 aa11.62□□□□□ -0.55
Nup54-201ENSMUST00000038514 MycbQ6P8Z1 170 aa11.62□□□□□ -0.55
Nup54-201ENSMUST00000038514 Vmn1r62Q8R2C0 300 aa11.62□□□□□ -0.55
Nup54-201ENSMUST00000038514 Plrg1Q922V4 513 aaKnown RBP11.62□□□□□ -0.55
Nup54-201ENSMUST00000038514 Vmn1r63Q9EPT1 300 aa11.62□□□□□ -0.55
Nup54-201ENSMUST00000038514 Dkk2Q9QYZ8 259 aa11.62□□□□□ -0.55
Nup54-201ENSMUST00000038514 Gm17359A0A0G2JEB7 487 aa11.61□□□□□ -0.55
Nup54-201ENSMUST00000038514 1520401A03RikA0A0J9YVH6 598 aa11.61□□□□□ -0.55
Nup54-201ENSMUST00000038514 Cd24P24807 76 aa11.61□□□□□ -0.55
Nup54-201ENSMUST00000038514 Ube2tQ9CQ37 204 aa11.61□□□□□ -0.55
Nup54-201ENSMUST00000038514 Dppa2Q9CWH0 301 aa11.61□□□□□ -0.55
Nup54-201ENSMUST00000038514 Cnot1Q6ZQ08 2375 aaKnown RBP11.61□□□□□ -0.55
Nup54-201ENSMUST00000038514 Abca1P41233 2261 aa11.61□□□□□ -0.55
Nup54-201ENSMUST00000038514 Sptbn2Q68FG2 2388 aa11.61□□□□□ -0.55
Nup54-201ENSMUST00000038514 Igsf23B2RTN2 239 aa11.61□□□□□ -0.55
Nup54-201ENSMUST00000038514 Q3UNZ8 350 aa11.61□□□□□ -0.55
Nup54-201ENSMUST00000038514 Gm7489Q3UT34 171 aa11.61□□□□□ -0.55
Nup54-201ENSMUST00000038514 Gm10118Q8C8J5 116 aa11.61□□□□□ -0.55
Nup54-201ENSMUST00000038514 AhspQ9CY02 102 aa11.61□□□□□ -0.55
Nup54-201ENSMUST00000038514 Cnn3Q9DAW9 330 aaKnown RBP11.61□□□□□ -0.55
Nup54-201ENSMUST00000038514 Slc25a20Q9Z2Z6 301 aaKnown RBP11.61□□□□□ -0.55
Nup54-201ENSMUST00000038514 Obox8V9GWY9 217 aa11.61□□□□□ -0.55
Nup54-201ENSMUST00000038514 Gm6525A0A0A6YW33 106 aa11.6□□□□□ -0.55
Nup54-201ENSMUST00000038514 Ccdc71lE9Q4T4 218 aa11.6□□□□□ -0.55
Nup54-201ENSMUST00000038514 Vsig4F6TUL9 280 aa11.6□□□□□ -0.55
Nup54-201ENSMUST00000038514 Prima1Q810F0 153 aa11.6□□□□□ -0.55
Nup54-201ENSMUST00000038514 MturnQ8CGA4 131 aa11.6□□□□□ -0.55
Nup54-201ENSMUST00000038514 Obp2aQ8K1H9 176 aa11.6□□□□□ -0.55
Nup54-201ENSMUST00000038514 Trpt1Q8K3A2 249 aa11.6□□□□□ -0.55
Nup54-201ENSMUST00000038514 Gm15293D3YX02 93 aa11.6□□□□□ -0.55
Nup54-201ENSMUST00000038514 Mtatp8P03930 67 aa11.6□□□□□ -0.55
Nup54-201ENSMUST00000038514 Gm5464Q3UY29 175 aa11.6□□□□□ -0.55
Nup54-201ENSMUST00000038514 Ndufa4l2Q4FZG9 87 aa11.6□□□□□ -0.55
Nup54-201ENSMUST00000038514 Crip3Q6Q6R3 243 aa11.6□□□□□ -0.55
Nup54-201ENSMUST00000038514 Zfp493E9Q1L8 384 aa11.59□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 104.7 ms