RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 REG3GQ6UW15 175 aa8.76□□□□□ -1.01
PHGDH-233ENST00000642021 K7EQZ3 153 aa8.76□□□□□ -1.01
PHGDH-233ENST00000642021 SRRM2Q9UQ35 2752 aaKnown RBP8.75□□□□□ -1.01
PHGDH-233ENST00000642021 DNAH9Q9NYC9 4486 aa8.74□□□□□ -1.01
PHGDH-233ENST00000642021 LINC00476Q8WZB0 136 aa8.74□□□□□ -1.01
PHGDH-233ENST00000642021 KRTAP1-5Q9BYS1 174 aa8.73□□□□□ -1.01
PHGDH-233ENST00000642021 A0A096LNI7 61 aa8.73□□□□□ -1.01
PHGDH-233ENST00000642021 IGKV2-24A0A0C4DH68 120 aa8.73□□□□□ -1.01
PHGDH-233ENST00000642021 PRLHP81277 87 aa8.73□□□□□ -1.01
PHGDH-233ENST00000642021 DEFB116Q30KQ4 102 aa8.72□□□□□ -1.01
PHGDH-233ENST00000642021 KTN1-AS1Q86SY8 53 aa8.72□□□□□ -1.01
PHGDH-233ENST00000642021 IGFL1Q6UW32 110 aa8.71□□□□□ -1.01
PHGDH-233ENST00000642021 K7EIL1 84 aa8.7□□□□□ -1.02
PHGDH-233ENST00000642021 LCE6AA0A183 80 aa8.7□□□□□ -1.02
PHGDH-233ENST00000642021 STAB2Q8WWQ8 2551 aa8.7□□□□□ -1.02
PHGDH-233ENST00000642021 MGAM2Q2M2H8 2515 aa8.68□□□□□ -1.02
PHGDH-233ENST00000642021 KRTAP11-1Q8IUC1 163 aa8.68□□□□□ -1.02
PHGDH-233ENST00000642021 COL7A1Q02388 2944 aa8.67□□□□□ -1.02
PHGDH-233ENST00000642021 C16orf90A8MZG2 172 aa8.67□□□□□ -1.02
PHGDH-233ENST00000642021 PSCAO43653 123 aa8.67□□□□□ -1.02
PHGDH-233ENST00000642021 TENM2Q9NT68 2774 aa8.66□□□□□ -1.02
PHGDH-233ENST00000642021 PSPHP1O15172 72 aa8.66□□□□□ -1.02
PHGDH-233ENST00000642021 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-233ENST00000642021 A0A087WSZ3 146 aa8.65□□□□□ -1.02
PHGDH-233ENST00000642021 DNAH7Q8WXX0 4024 aa8.65□□□□□ -1.03
PHGDH-233ENST00000642021 HCG22E2RYF7 251 aa8.65□□□□□ -1.03
PHGDH-233ENST00000642021 CHTF8P0CG12 524 aa8.65□□□□□ -1.03
PHGDH-233ENST00000642021 ZCCHC13Q8WW36 166 aaKnown RBP8.65□□□□□ -1.03
PHGDH-233ENST00000642021 LRCOL1A6NCL2 159 aa8.64□□□□□ -1.03
PHGDH-233ENST00000642021 C8orf87E5RJ46 101 aa8.64□□□□□ -1.03
PHGDH-233ENST00000642021 CNBPP62633 177 aaKnown RBP8.63□□□□□ -1.03
PHGDH-233ENST00000642021 A8MU10 97 aa8.63□□□□□ -1.03
PHGDH-233ENST00000642021 RPL37AP61513 92 aaKnown RBP8.63□□□□□ -1.03
PHGDH-233ENST00000642021 PHF5AQ7RTV0 110 aaKnown RBP8.63□□□□□ -1.03
PHGDH-233ENST00000642021 IGLV8-61A0A075B6I0 122 aa8.62□□□□□ -1.03
PHGDH-233ENST00000642021 WFDC13Q8IUB5 93 aa8.61□□□□□ -1.03
PHGDH-233ENST00000642021 Q1T7F1 81 aa8.61□□□□□ -1.03
PHGDH-233ENST00000642021 UBE2AP49459 152 aa8.6□□□□□ -1.03
PHGDH-233ENST00000642021 hDV103S1A0JD37 113 aa8.57□□□□□ -1.04
PHGDH-233ENST00000642021 PRR4Q16378 134 aa8.57□□□□□ -1.04
PHGDH-233ENST00000642021 C1orf64Q8NEQ6 169 aa8.57□□□□□ -1.04
PHGDH-233ENST00000642021 PLECQ15149 4684 aaKnown RBP8.56□□□□□ -1.04
PHGDH-233ENST00000642021 TRAV22A0A0B4J277 110 aa8.55□□□□□ -1.04
PHGDH-233ENST00000642021 KRTAP29-1A8MX34 341 aaPredicted RBP8.55□□□□□ -1.04
PHGDH-233ENST00000642021 NDUFS5O43920 106 aa8.55□□□□□ -1.04
PHGDH-233ENST00000642021 UBE2DNLQ8IWF7 75 aa8.55□□□□□ -1.04
PHGDH-233ENST00000642021 PRR26Q8N8Z3 221 aa8.54□□□□□ -1.04
PHGDH-233ENST00000642021 APLNQ9ULZ1 77 aa8.54□□□□□ -1.04
PHGDH-233ENST00000642021 PANO1I0J062 215 aa8.54□□□□□ -1.04
PHGDH-233ENST00000642021 SPTSSBQ8NFR3 76 aa8.54□□□□□ -1.04
PHGDH-233ENST00000642021 SPRR1BP22528 89 aa8.53□□□□□ -1.04
PHGDH-233ENST00000642021 H0Y9J4 135 aa8.51□□□□□ -1.05
PHGDH-233ENST00000642021 C9orf163Q8N9P6 203 aa8.51□□□□□ -1.05
PHGDH-233ENST00000642021 LINC00472Q9H8W2 130 aa8.51□□□□□ -1.05
PHGDH-233ENST00000642021 A8MUN3 132 aa8.5□□□□□ -1.05
PHGDH-233ENST00000642021 DYNC2H1Q8NCM8 4307 aaKnown RBP8.5□□□□□ -1.05
PHGDH-233ENST00000642021 LINC00208Q96KT6 92 aa8.5□□□□□ -1.05
PHGDH-233ENST00000642021 CASC2Q6XLA1 102 aa8.49□□□□□ -1.05
PHGDH-233ENST00000642021 C14orf177Q52M58 125 aa8.48□□□□□ -1.05
PHGDH-233ENST00000642021 CYP4F30PQ9H0H9 118 aa8.48□□□□□ -1.05
PHGDH-233ENST00000642021 MP68P56378 58 aa8.47□□□□□ -1.05
PHGDH-233ENST00000642021 A8MWP4 228 aa8.47□□□□□ -1.05
PHGDH-233ENST00000642021 KRTAP13-1Q8IUC0 172 aa8.45□□□□□ -1.06
PHGDH-233ENST00000642021 B9D2Q9BPU9 175 aa8.44□□□□□ -1.06
PHGDH-233ENST00000642021 H0Y9P7 68 aa8.44□□□□□ -1.06
PHGDH-233ENST00000642021 NDUFB1O75438 58 aa8.44□□□□□ -1.06
PHGDH-233ENST00000642021 A6NN06 94 aa8.43□□□□□ -1.06
PHGDH-233ENST00000642021 Q5VV11 94 aa8.43□□□□□ -1.06
PHGDH-233ENST00000642021 Q6ZRN7 208 aaPredicted RBP8.43□□□□□ -1.06
PHGDH-233ENST00000642021 LCA10Q71F78 164 aa8.43□□□□□ -1.06
PHGDH-233ENST00000642021 NBDYA0A0U1RRE5 68 aa8.42□□□□□ -1.06
PHGDH-233ENST00000642021 C7orf65Q6ZTY9 151 aa8.42□□□□□ -1.06
PHGDH-233ENST00000642021 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.42□□□□□ -1.06
PHGDH-233ENST00000642021 CHKB-CPT1BH3BT56 60 aa8.41□□□□□ -1.06
PHGDH-233ENST00000642021 ATP11AUNQ6ZP68 121 aa8.41□□□□□ -1.06
PHGDH-233ENST00000642021 MDFIQ99750 246 aa8.41□□□□□ -1.06
PHGDH-233ENST00000642021 IGLV9-49A0A0B4J1Y8 123 aa8.4□□□□□ -1.06
PHGDH-233ENST00000642021 MMP24-AS1A0A0U1RRL7 71 aa8.4□□□□□ -1.06
PHGDH-233ENST00000642021 STARD9Q9P2P6 4700 aa8.4□□□□□ -1.06
PHGDH-233ENST00000642021 FRAS1Q86XX4 4008 aa8.39□□□□□ -1.07
PHGDH-233ENST00000642021 Q96NJ1 140 aa8.38□□□□□ -1.07
PHGDH-233ENST00000642021 HECTD4Q9Y4D8 3996 aa8.37□□□□□ -1.07
PHGDH-233ENST00000642021 SPACA4Q8TDM5 124 aa8.36□□□□□ -1.07
PHGDH-233ENST00000642021 H3BPC8 53 aa8.35□□□□□ -1.07
PHGDH-233ENST00000642021 DNAH8Q96JB1 4490 aa8.35□□□□□ -1.07
PHGDH-233ENST00000642021 SPANXA2-OT1Q8N9U9 137 aa8.34□□□□□ -1.07
PHGDH-233ENST00000642021 MOBPQ13875 183 aa8.34□□□□□ -1.07
PHGDH-233ENST00000642021 VPS13DQ5THJ4 4388 aa8.34□□□□□ -1.08
PHGDH-233ENST00000642021 ANAPC11Q9NYG5 84 aa8.33□□□□□ -1.08
PHGDH-233ENST00000642021 KMT2AQ03164 3969 aa8.33□□□□□ -1.08
PHGDH-233ENST00000642021 DNAH2Q9P225 4427 aa8.31□□□□□ -1.08
PHGDH-233ENST00000642021 ASB16-AS1Q495Z4 193 aa8.31□□□□□ -1.08
PHGDH-233ENST00000642021 LINC00483Q53H64 154 aa8.3□□□□□ -1.08
PHGDH-233ENST00000642021 WWC2-AS2Q96NR7 200 aa8.29□□□□□ -1.08
PHGDH-233ENST00000642021 A0A087WTM6 91 aa8.29□□□□□ -1.08
PHGDH-233ENST00000642021 PSORS1C2Q9UIG4 136 aa8.29□□□□□ -1.08
PHGDH-233ENST00000642021 A6NED7 52 aa8.28□□□□□ -1.08
PHGDH-233ENST00000642021 PRR15LQ9BU68 103 aa8.28□□□□□ -1.08
PHGDH-233ENST00000642021 NUPR2A6NF83 97 aa8.28□□□□□ -1.08
PHGDH-233ENST00000642021 PCOTHQ58A44 107 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms