RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 A8MWP4 228 aa3.61□□□□□ -1.83
SCN3A-210ENST00000640652 EPM2AB3EWF7 344 aa3.61□□□□□ -1.83
SCN3A-210ENST00000640652 C1orf195Q5TG92 126 aa3.61□□□□□ -1.83
SCN3A-210ENST00000640652 TRAV22A0A0B4J277 110 aa3.61□□□□□ -1.83
SCN3A-210ENST00000640652 MOBPQ13875 183 aa3.61□□□□□ -1.83
SCN3A-210ENST00000640652 CHKB-CPT1BH3BT56 60 aa3.6□□□□□ -1.83
SCN3A-210ENST00000640652 ST20-AS1Q8NBB2 130 aa3.6□□□□□ -1.83
SCN3A-210ENST00000640652 PRB2P02812 416 aaPredicted RBP3.6□□□□□ -1.83
SCN3A-210ENST00000640652 A0A096LNI7 61 aa3.6□□□□□ -1.83
SCN3A-210ENST00000640652 A6NED7 52 aa3.6□□□□□ -1.83
SCN3A-210ENST00000640652 RPL37AP61513 92 aaKnown RBP3.6□□□□□ -1.83
SCN3A-210ENST00000640652 C1orf64Q8NEQ6 169 aa3.59□□□□□ -1.83
SCN3A-210ENST00000640652 IGLV9-49A0A0B4J1Y8 123 aa3.59□□□□□ -1.83
SCN3A-210ENST00000640652 IGFL1Q6UW32 110 aa3.59□□□□□ -1.83
SCN3A-210ENST00000640652 PRR4Q16378 134 aa3.59□□□□□ -1.83
SCN3A-210ENST00000640652 PRR15LQ9BU68 103 aa3.59□□□□□ -1.83
SCN3A-210ENST00000640652 SPANXA2-OT1Q8N9U9 137 aa3.59□□□□□ -1.83
SCN3A-210ENST00000640652 PSPHP1O15172 72 aa3.59□□□□□ -1.84
SCN3A-210ENST00000640652 M0R2N4 97 aa3.58□□□□□ -1.84
SCN3A-210ENST00000640652 SPRR1AP35321 89 aa3.58□□□□□ -1.84
SCN3A-210ENST00000640652 Q5XG85 94 aa3.58□□□□□ -1.84
SCN3A-210ENST00000640652 DEFB116Q30KQ4 102 aa3.58□□□□□ -1.84
SCN3A-210ENST00000640652 PRR15Q8IV56 129 aa3.58□□□□□ -1.84
SCN3A-210ENST00000640652 Q1T7F1 81 aa3.57□□□□□ -1.84
SCN3A-210ENST00000640652 A0A1W2PNM2 257 aa3.57□□□□□ -1.84
SCN3A-210ENST00000640652 LRCOL1A6NCL2 159 aa3.57□□□□□ -1.84
SCN3A-210ENST00000640652 KRTAP24-1Q3LI83 254 aa3.57□□□□□ -1.84
SCN3A-210ENST00000640652 IGHV6-1A0A0B4J1U7 121 aa3.56□□□□□ -1.84
SCN3A-210ENST00000640652 KRTAP26-1Q6PEX3 210 aa3.56□□□□□ -1.84
SCN3A-210ENST00000640652 LINC00336Q6ZUF6 198 aa3.56□□□□□ -1.84
SCN3A-210ENST00000640652 SPTSSBQ8NFR3 76 aa3.56□□□□□ -1.84
SCN3A-210ENST00000640652 C4orf48Q5BLP8 95 aa3.55□□□□□ -1.84
SCN3A-210ENST00000640652 DSCR10P59022 87 aa3.55□□□□□ -1.84
SCN3A-210ENST00000640652 PMAIP1Q13794 54 aa3.55□□□□□ -1.84
SCN3A-210ENST00000640652 DMBT1Q9UGM3 2413 aaPredicted RBP3.55□□□□□ -1.84
SCN3A-210ENST00000640652 NBDYA0A0U1RRE5 68 aa3.55□□□□□ -1.84
SCN3A-210ENST00000640652 IGLV8-61A0A075B6I0 122 aa3.54□□□□□ -1.84
SCN3A-210ENST00000640652 KRTAP4-16G5E9R7 235 aaPredicted RBP3.54□□□□□ -1.84
SCN3A-210ENST00000640652 MEGF8Q7Z7M0 2845 aa3.54□□□□□ -1.84
SCN3A-210ENST00000640652 MDFIQ99750 246 aa3.54□□□□□ -1.84
SCN3A-210ENST00000640652 IGLV5-52A0A0A0MRZ9 124 aa3.54□□□□□ -1.84
SCN3A-210ENST00000640652 PHF5AQ7RTV0 110 aaKnown RBP3.53□□□□□ -1.84
SCN3A-210ENST00000640652 K7EIL1 84 aa3.53□□□□□ -1.84
SCN3A-210ENST00000640652 TNP2Q05952 138 aa3.53□□□□□ -1.84
SCN3A-210ENST00000640652 CYP4F30PQ9H0H9 118 aa3.53□□□□□ -1.84
SCN3A-210ENST00000640652 OXTP01178 125 aa3.53□□□□□ -1.84
SCN3A-210ENST00000640652 CHTF8P0CG12 524 aa3.52□□□□□ -1.85
SCN3A-210ENST00000640652 FP248Q71RG6 208 aaPredicted RBP3.52□□□□□ -1.85
SCN3A-210ENST00000640652 COL7A1Q02388 2944 aa3.52□□□□□ -1.85
SCN3A-210ENST00000640652 C9orf163Q8N9P6 203 aa3.52□□□□□ -1.85
SCN3A-210ENST00000640652 HECTD4Q9Y4D8 3996 aa3.52□□□□□ -1.85
SCN3A-210ENST00000640652 CMYA5Q8N3K9 4069 aa3.52□□□□□ -1.85
SCN3A-210ENST00000640652 LOC101927531A0A1B0GV80 90 aa3.52□□□□□ -1.85
SCN3A-210ENST00000640652 SPINK6Q6UWN8 80 aa3.52□□□□□ -1.85
SCN3A-210ENST00000640652 LYSTQ99698 3801 aa3.52□□□□□ -1.85
SCN3A-210ENST00000640652 CIRBP-AS1Q8TBR5 109 aa3.51□□□□□ -1.85
SCN3A-210ENST00000640652 CSMD3Q7Z407 3707 aa3.51□□□□□ -1.85
SCN3A-210ENST00000640652 CASC10Q5T4H9 136 aa3.51□□□□□ -1.85
SCN3A-210ENST00000640652 A0A1B0GVX0 72 aa3.5□□□□□ -1.85
SCN3A-210ENST00000640652 SEC61GP60059 68 aa3.5□□□□□ -1.85
SCN3A-210ENST00000640652 COA5Q86WW8 74 aa3.5□□□□□ -1.85
SCN3A-210ENST00000640652 PCOTHQ58A44 107 aa3.49□□□□□ -1.85
SCN3A-210ENST00000640652 LCE6AA0A183 80 aa3.49□□□□□ -1.85
SCN3A-210ENST00000640652 A0A1W2PNN7 141 aa3.49□□□□□ -1.85
SCN3A-210ENST00000640652 ACYP2P14621 99 aa3.49□□□□□ -1.85
SCN3A-210ENST00000640652 RTL8CO15255 209 aa3.49□□□□□ -1.85
SCN3A-210ENST00000640652 C1orf134Q5TEV5 83 aa3.48□□□□□ -1.85
SCN3A-210ENST00000640652 SPRR1BP22528 89 aa3.48□□□□□ -1.85
SCN3A-210ENST00000640652 FAM229BQ4G0N7 80 aa3.48□□□□□ -1.85
SCN3A-210ENST00000640652 DNAH3Q8TD57 4116 aa3.48□□□□□ -1.85
SCN3A-210ENST00000640652 SPAG11AQ6PDA7 123 aa3.48□□□□□ -1.85
SCN3A-210ENST00000640652 ZNF861PO60384 105 aa3.47□□□□□ -1.85
SCN3A-210ENST00000640652 C8orf17Q9NRJ1 99 aa3.47□□□□□ -1.85
SCN3A-210ENST00000640652 APLNQ9ULZ1 77 aa3.47□□□□□ -1.85
SCN3A-210ENST00000640652 MRPL34Q9BQ48 92 aaKnown RBP3.47□□□□□ -1.85
SCN3A-210ENST00000640652 LINC00472Q9H8W2 130 aa3.47□□□□□ -1.85
SCN3A-210ENST00000640652 SPACA4Q8TDM5 124 aa3.47□□□□□ -1.85
SCN3A-210ENST00000640652 ATP11AUNQ6ZP68 121 aa3.47□□□□□ -1.85
SCN3A-210ENST00000640652 FAM229AH3BQW9 127 aa3.46□□□□□ -1.85
SCN3A-210ENST00000640652 C8orf87E5RJ46 101 aa3.46□□□□□ -1.86
SCN3A-210ENST00000640652 A0A0G2JQZ4 141 aa3.46□□□□□ -1.86
SCN3A-210ENST00000640652 ZCCHC13Q8WW36 166 aaKnown RBP3.46□□□□□ -1.86
SCN3A-210ENST00000640652 CD164Q04900 197 aa3.45□□□□□ -1.86
SCN3A-210ENST00000640652 IGLV7-46A0A075B6I9 117 aa3.45□□□□□ -1.86
SCN3A-210ENST00000640652 Q75L30 129 aa3.45□□□□□ -1.86
SCN3A-210ENST00000640652 LINC00313P59037 77 aa3.45□□□□□ -1.86
SCN3A-210ENST00000640652 A0A087WTM6 91 aa3.44□□□□□ -1.86
SCN3A-210ENST00000640652 A8MUN3 132 aa3.44□□□□□ -1.86
SCN3A-210ENST00000640652 FBN3Q75N90 2809 aa3.44□□□□□ -1.86
SCN3A-210ENST00000640652 LY6G6CO95867 125 aa3.44□□□□□ -1.86
SCN3A-210ENST00000640652 KRTAP1-5Q9BYS1 174 aa3.44□□□□□ -1.86
SCN3A-210ENST00000640652 PSORS1C2Q9UIG4 136 aa3.44□□□□□ -1.86
SCN3A-210ENST00000640652 LINC00483Q53H64 154 aa3.43□□□□□ -1.86
SCN3A-210ENST00000640652 MMP24-AS1A0A0U1RRL7 71 aa3.43□□□□□ -1.86
SCN3A-210ENST00000640652 KTN1-AS1Q86SY8 53 aa3.42□□□□□ -1.86
SCN3A-210ENST00000640652 CDC42SE1Q9NRR8 79 aa3.42□□□□□ -1.86
SCN3A-210ENST00000640652 SSBP3-AS1Q7Z2R9 100 aa3.42□□□□□ -1.86
SCN3A-210ENST00000640652 A0A1B0GU69 56 aa3.42□□□□□ -1.86
SCN3A-210ENST00000640652 KRTAP29-1A8MX34 341 aaPredicted RBP3.41□□□□□ -1.86
SCN3A-210ENST00000640652 Q6ZR54 194 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms