RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 Q6ZSN1 163 aa3.79□□□□□ -1.8
RTTN-218ENST00000640408 Q8NBF4 154 aa3.79□□□□□ -1.8
RTTN-218ENST00000640408 LINC00167Q96N53 147 aa3.79□□□□□ -1.8
RTTN-218ENST00000640408 SMG1Q96Q15 3661 aaKnown RBP3.78□□□□□ -1.8
RTTN-218ENST00000640408 ASPMQ8IZT6 3477 aa3.78□□□□□ -1.8
RTTN-218ENST00000640408 EIF4EBP3O60516 100 aaPredicted RBP3.77□□□□□ -1.81
RTTN-218ENST00000640408 CYSTM1Q9H1C7 97 aa3.77□□□□□ -1.81
RTTN-218ENST00000640408 IGKV2-24A0A0C4DH68 120 aa3.77□□□□□ -1.81
RTTN-218ENST00000640408 FAM229BQ4G0N7 80 aa3.77□□□□□ -1.81
RTTN-218ENST00000640408 NBEAL2Q6ZNJ1 2754 aa3.77□□□□□ -1.81
RTTN-218ENST00000640408 SSBP3-AS1Q7Z2R9 100 aa3.77□□□□□ -1.81
RTTN-218ENST00000640408 IGHV3OR16-9A0A0B4J2B5 98 aa3.77□□□□□ -1.81
RTTN-218ENST00000640408 PRR34Q9NV39 138 aa3.76□□□□□ -1.81
RTTN-218ENST00000640408 SPINK6Q6UWN8 80 aa3.76□□□□□ -1.81
RTTN-218ENST00000640408 C7orf33Q8WU49 177 aa3.76□□□□□ -1.81
RTTN-218ENST00000640408 Q6ZRP5 223 aa3.76□□□□□ -1.81
RTTN-218ENST00000640408 CELSR1Q9NYQ6 3014 aa3.76□□□□□ -1.81
RTTN-218ENST00000640408 IGLV5-52A0A0A0MRZ9 124 aa3.75□□□□□ -1.81
RTTN-218ENST00000640408 IGLV9-49A0A0B4J1Y8 123 aa3.75□□□□□ -1.81
RTTN-218ENST00000640408 MOBPQ13875 183 aa3.75□□□□□ -1.81
RTTN-218ENST00000640408 PHF5AQ7RTV0 110 aaKnown RBP3.75□□□□□ -1.81
RTTN-218ENST00000640408 K7EQZ3 153 aa3.75□□□□□ -1.81
RTTN-218ENST00000640408 SPINK1P00995 79 aa3.75□□□□□ -1.81
RTTN-218ENST00000640408 OCR1Q9BZK8 76 aa3.75□□□□□ -1.81
RTTN-218ENST00000640408 LINC00313P59037 77 aa3.74□□□□□ -1.81
RTTN-218ENST00000640408 ASB16-AS1Q495Z4 193 aa3.74□□□□□ -1.81
RTTN-218ENST00000640408 KRTAP17-1Q9BYP8 105 aa3.74□□□□□ -1.81
RTTN-218ENST00000640408 IGLV6-57P01721 117 aa3.74□□□□□ -1.81
RTTN-218ENST00000640408 FBN3Q75N90 2809 aa3.74□□□□□ -1.81
RTTN-218ENST00000640408 A8MWP4 228 aa3.73□□□□□ -1.81
RTTN-218ENST00000640408 Q5VV11 94 aa3.73□□□□□ -1.81
RTTN-218ENST00000640408 C16orf90A8MZG2 172 aa3.73□□□□□ -1.81
RTTN-218ENST00000640408 EPM2AB3EWF7 344 aa3.73□□□□□ -1.81
RTTN-218ENST00000640408 ZNF575Q86XF7 245 aa3.73□□□□□ -1.81
RTTN-218ENST00000640408 PRLHP81277 87 aa3.73□□□□□ -1.81
RTTN-218ENST00000640408 FBN1P35555 2871 aaKnown RBP3.72□□□□□ -1.81
RTTN-218ENST00000640408 LINC01558Q9Y6Z2 57 aa3.72□□□□□ -1.81
RTTN-218ENST00000640408 TENM3Q9P273 2699 aa3.72□□□□□ -1.81
RTTN-218ENST00000640408 C9orf129Q5T035 196 aaKnown RBP3.72□□□□□ -1.81
RTTN-218ENST00000640408 GVQW2A0A096LPI5 108 aaPredicted RBP3.72□□□□□ -1.81
RTTN-218ENST00000640408 WDFY3Q8IZQ1 3526 aa3.72□□□□□ -1.81
RTTN-218ENST00000640408 A0A087WTM6 91 aa3.71□□□□□ -1.81
RTTN-218ENST00000640408 Q8N9P0 234 aaPredicted RBP3.71□□□□□ -1.82
RTTN-218ENST00000640408 Q6ZR54 194 aa3.71□□□□□ -1.82
RTTN-218ENST00000640408 Q6ZRX8 168 aa3.7□□□□□ -1.82
RTTN-218ENST00000640408 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
RTTN-218ENST00000640408 CRIPTQ9P021 101 aa3.7□□□□□ -1.82
RTTN-218ENST00000640408 C9orf163Q8N9P6 203 aa3.69□□□□□ -1.82
RTTN-218ENST00000640408 BSNQ9UPA5 3926 aa3.69□□□□□ -1.82
RTTN-218ENST00000640408 VWFP04275 2813 aa3.69□□□□□ -1.82
RTTN-218ENST00000640408 ST20-AS1Q8NBB2 130 aa3.69□□□□□ -1.82
RTTN-218ENST00000640408 RPL37AP61513 92 aaKnown RBP3.69□□□□□ -1.82
RTTN-218ENST00000640408 CNBPP62633 177 aaKnown RBP3.69□□□□□ -1.82
RTTN-218ENST00000640408 KCNQ1DNQ9H478 68 aa3.69□□□□□ -1.82
RTTN-218ENST00000640408 IGLV8-61A0A075B6I0 122 aa3.68□□□□□ -1.82
RTTN-218ENST00000640408 RTL8CO15255 209 aa3.68□□□□□ -1.82
RTTN-218ENST00000640408 FAM229AH3BQW9 127 aa3.68□□□□□ -1.82
RTTN-218ENST00000640408 MRPL34Q9BQ48 92 aaKnown RBP3.67□□□□□ -1.82
RTTN-218ENST00000640408 C22orf24Q9Y442 160 aa3.67□□□□□ -1.82
RTTN-218ENST00000640408 IGLV7-46A0A075B6I9 117 aa3.67□□□□□ -1.82
RTTN-218ENST00000640408 DMAC1Q96GE9 116 aa3.67□□□□□ -1.82
RTTN-218ENST00000640408 IGKV2D-30A0A075B6S6 120 aa3.66□□□□□ -1.82
RTTN-218ENST00000640408 IGKV2-30P06310 120 aa3.66□□□□□ -1.82
RTTN-218ENST00000640408 LINC00528Q8N1L1 170 aa3.66□□□□□ -1.82
RTTN-218ENST00000640408 CSAG1Q6PB30 78 aa3.66□□□□□ -1.82
RTTN-218ENST00000640408 PLA2G1BP04054 148 aaKnown RBP3.66□□□□□ -1.82
RTTN-218ENST00000640408 TLX1NBP0CAT3 122 aa3.65□□□□□ -1.82
RTTN-218ENST00000640408 NBPF19A0A087WUL8 3843 aa3.65□□□□□ -1.83
RTTN-218ENST00000640408 TNP2Q05952 138 aa3.65□□□□□ -1.83
RTTN-218ENST00000640408 A6NN06 94 aa3.64□□□□□ -1.83
RTTN-218ENST00000640408 ZFHX3Q15911 3703 aa3.64□□□□□ -1.83
RTTN-218ENST00000640408 CIRBP-AS1Q8TBR5 109 aa3.64□□□□□ -1.83
RTTN-218ENST00000640408 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
RTTN-218ENST00000640408 C8orf17Q9NRJ1 99 aa3.63□□□□□ -1.83
RTTN-218ENST00000640408 PKD1L1Q8TDX9 2849 aa3.63□□□□□ -1.83
RTTN-218ENST00000640408 PRR26Q8N8Z3 221 aa3.63□□□□□ -1.83
RTTN-218ENST00000640408 ANK3Q12955 4377 aaKnown RBP3.63□□□□□ -1.83
RTTN-218ENST00000640408 C15orf56Q8N910 161 aa3.62□□□□□ -1.83
RTTN-218ENST00000640408 TGP01266 2768 aa3.62□□□□□ -1.83
RTTN-218ENST00000640408 KRTAP16-1A8MUX0 517 aa3.62□□□□□ -1.83
RTTN-218ENST00000640408 IGFL1Q6UW32 110 aa3.62□□□□□ -1.83
RTTN-218ENST00000640408 Q8N377 158 aa3.61□□□□□ -1.83
RTTN-218ENST00000640408 PLA2G2DQ9UNK4 145 aa3.61□□□□□ -1.83
RTTN-218ENST00000640408 KRTAP1-5Q9BYS1 174 aa3.61□□□□□ -1.83
RTTN-218ENST00000640408 SPINK7P58062 85 aa3.61□□□□□ -1.83
RTTN-218ENST00000640408 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
RTTN-218ENST00000640408 IGLV5-48A0A075B6I7 105 aa3.6□□□□□ -1.83
RTTN-218ENST00000640408 CHTF8P0CG12 524 aa3.6□□□□□ -1.83
RTTN-218ENST00000640408 A0A1B0GVX0 72 aa3.6□□□□□ -1.83
RTTN-218ENST00000640408 FAM104AQ969W3 186 aa3.6□□□□□ -1.83
RTTN-218ENST00000640408 A0A1W2PNM2 257 aa3.59□□□□□ -1.83
RTTN-218ENST00000640408 Q6ZRN7 208 aaPredicted RBP3.59□□□□□ -1.83
RTTN-218ENST00000640408 IGLV1-50A0A075B6I6 118 aa3.59□□□□□ -1.84
RTTN-218ENST00000640408 KRTAP26-1Q6PEX3 210 aa3.59□□□□□ -1.84
RTTN-218ENST00000640408 DSCR10P59022 87 aa3.58□□□□□ -1.84
RTTN-218ENST00000640408 A0A087X002 238 aa3.58□□□□□ -1.84
RTTN-218ENST00000640408 SPENQ96T58 3664 aaKnown RBP3.57□□□□□ -1.84
RTTN-218ENST00000640408 SPRR4Q96PI1 79 aa3.57□□□□□ -1.84
RTTN-218ENST00000640408 TENM2Q9NT68 2774 aa3.57□□□□□ -1.84
RTTN-218ENST00000640408 IGLV5-37A0A075B6J1 123 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms