RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 KRTAP19-3Q7Z4W3 81 aa0.6□□□□□ -2.31
CCDC7-216ENST00000640058 NOP10Q9NPE3 64 aaKnown RBP0.6□□□□□ -2.31
CCDC7-216ENST00000640058 ZFHX3Q15911 3703 aa0.6□□□□□ -2.31
CCDC7-216ENST00000640058 RPL39P62891 51 aaKnown RBP0.59□□□□□ -2.31
CCDC7-216ENST00000640058 KLK9Q2XQG4 91 aa0.59□□□□□ -2.31
CCDC7-216ENST00000640058 LELP1Q5T871 98 aa0.59□□□□□ -2.31
CCDC7-216ENST00000640058 FRAS1Q86XX4 4008 aa0.59□□□□□ -2.32
CCDC7-216ENST00000640058 NAV3Q8IVL0 2385 aa0.59□□□□□ -2.32
CCDC7-216ENST00000640058 A0A0D9SG42 100 aa0.58□□□□□ -2.32
CCDC7-216ENST00000640058 H0YGG7 62 aa0.58□□□□□ -2.32
CCDC7-216ENST00000640058 DEFB106AQ8N104 65 aa0.58□□□□□ -2.32
CCDC7-216ENST00000640058 TTTY10Q9BZA0 68 aa0.58□□□□□ -2.32
CCDC7-216ENST00000640058 FAM208BQ5VWN6 2430 aa0.58□□□□□ -2.32
CCDC7-216ENST00000640058 DOPEY2Q9Y3R5 2298 aa0.58□□□□□ -2.32
CCDC7-216ENST00000640058 CNOT1A5YKK6 2376 aaKnown RBP0.57□□□□□ -2.32
CCDC7-216ENST00000640058 MMP24-AS1A0A0U1RRL7 71 aa0.57□□□□□ -2.32
CCDC7-216ENST00000640058 RPL39LQ96EH5 51 aaKnown RBP0.57□□□□□ -2.32
CCDC7-216ENST00000640058 PTPRQQ9UMZ3 2332 aa0.56□□□□□ -2.32
CCDC7-216ENST00000640058 USP24Q9UPU5 2620 aa0.56□□□□□ -2.32
CCDC7-216ENST00000640058 PRCDQ00LT1 54 aa0.56□□□□□ -2.32
CCDC7-216ENST00000640058 TOMM7Q9P0U1 55 aa0.56□□□□□ -2.32
CCDC7-216ENST00000640058 S4R3F8 94 aa0.56□□□□□ -2.32
CCDC7-216ENST00000640058 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.56□□□□□ -2.32
CCDC7-216ENST00000640058 BPTFQ12830 3046 aa0.56□□□□□ -2.32
CCDC7-216ENST00000640058 WNK2Q9Y3S1 2297 aa0.55□□□□□ -2.32
CCDC7-216ENST00000640058 ANKRD17O75179 2603 aaKnown RBP0.55□□□□□ -2.32
CCDC7-216ENST00000640058 A8MTW9 85 aa0.55□□□□□ -2.32
CCDC7-216ENST00000640058 H3BSH0 61 aa0.55□□□□□ -2.32
CCDC7-216ENST00000640058 M0QY20 66 aa0.55□□□□□ -2.32
CCDC7-216ENST00000640058 SPINK1P00995 79 aa0.55□□□□□ -2.32
CCDC7-216ENST00000640058 LINC01590Q5TEZ4 76 aa0.55□□□□□ -2.32
CCDC7-216ENST00000640058 LEAP2Q969E1 77 aa0.55□□□□□ -2.32
CCDC7-216ENST00000640058 JMJD1CQ15652 2540 aa0.54□□□□□ -2.32
CCDC7-216ENST00000640058 USF3Q68DE3 2245 aa0.54□□□□□ -2.32
CCDC7-216ENST00000640058 PTPRZ1P23471 2315 aaPredicted RBP0.54□□□□□ -2.32
CCDC7-216ENST00000640058 PLCE1Q9P212 2302 aa0.54□□□□□ -2.32
CCDC7-216ENST00000640058 SPINK6Q6UWN8 80 aa0.53□□□□□ -2.32
CCDC7-216ENST00000640058 DEFB135Q30KP9 77 aa0.52□□□□□ -2.33
CCDC7-216ENST00000640058 CLPSL2Q6UWE3 100 aa0.52□□□□□ -2.33
CCDC7-216ENST00000640058 M0QZ58 72 aa0.51□□□□□ -2.33
CCDC7-216ENST00000640058 PKDREJQ9NTG1 2253 aa0.51□□□□□ -2.33
CCDC7-216ENST00000640058 K7EIM0 57 aa0.5□□□□□ -2.33
CCDC7-216ENST00000640058 M0R2T5 61 aa0.5□□□□□ -2.33
CCDC7-216ENST00000640058 TMEM167AQ8TBQ9 72 aa0.5□□□□□ -2.33
CCDC7-216ENST00000640058 KNL1Q8NG31 2342 aa0.49□□□□□ -2.33
CCDC7-216ENST00000640058 PIEZO2Q9H5I5 2752 aa0.49□□□□□ -2.33
CCDC7-216ENST00000640058 C2CD3Q4AC94 2353 aa0.49□□□□□ -2.33
CCDC7-216ENST00000640058 TPRP12270 2363 aaKnown RBP0.48□□□□□ -2.33
CCDC7-216ENST00000640058 C9orf92A6NGG3 77 aa0.48□□□□□ -2.33
CCDC7-216ENST00000640058 TNP1P09430 55 aa0.48□□□□□ -2.33
CCDC7-216ENST00000640058 DEFB104AQ8WTQ1 72 aa0.48□□□□□ -2.33
CCDC7-216ENST00000640058 U3KQA8 63 aa0.48□□□□□ -2.33
CCDC7-216ENST00000640058 SPTBN2O15020 2390 aa0.48□□□□□ -2.33
CCDC7-216ENST00000640058 PDE4DIPQ5VU43 2346 aa0.48□□□□□ -2.33
CCDC7-216ENST00000640058 PCNX1Q96RV3 2341 aa0.47□□□□□ -2.33
CCDC7-216ENST00000640058 SPART-AS1P0CW21 52 aa0.47□□□□□ -2.33
CCDC7-216ENST00000640058 MEGF8Q7Z7M0 2845 aa0.47□□□□□ -2.33
CCDC7-216ENST00000640058 BDP1A6H8Y1 2624 aa0.47□□□□□ -2.33
CCDC7-216ENST00000640058 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
CCDC7-216ENST00000640058 H3BNG1 76 aa0.46□□□□□ -2.34
CCDC7-216ENST00000640058 RPL39P5Q59GN2 51 aa0.46□□□□□ -2.34
CCDC7-216ENST00000640058 SPTBN1Q01082 2364 aaKnown RBP0.46□□□□□ -2.34
CCDC7-216ENST00000640058 NAV2Q8IVL1 2488 aa0.45□□□□□ -2.34
CCDC7-216ENST00000640058 TTC28Q96AY4 2481 aa0.45□□□□□ -2.34
CCDC7-216ENST00000640058 DEFB108AA8MXU0 73 aa0.45□□□□□ -2.34
CCDC7-216ENST00000640058 H3BUX3 64 aa0.45□□□□□ -2.34
CCDC7-216ENST00000640058 RHPN1-AS1Q9BWJ2 59 aa0.45□□□□□ -2.34
CCDC7-216ENST00000640058 ABCA2Q9BZC7 2435 aa0.45□□□□□ -2.34
CCDC7-216ENST00000640058 CACNA1HO95180 2353 aa0.45□□□□□ -2.34
CCDC7-216ENST00000640058 CSPG4Q6UVK1 2322 aa0.44□□□□□ -2.34
CCDC7-216ENST00000640058 DEFB110Q30KQ9 67 aa0.44□□□□□ -2.34
CCDC7-216ENST00000640058 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
CCDC7-216ENST00000640058 ALMS1Q8TCU4 4167 aa0.43□□□□□ -2.34
CCDC7-216ENST00000640058 SMR3AQ99954 134 aa0.43□□□□□ -2.34
CCDC7-216ENST00000640058 AKAP6Q13023 2319 aa0.43□□□□□ -2.34
CCDC7-216ENST00000640058 IGF2RP11717 2491 aa0.42□□□□□ -2.34
CCDC7-216ENST00000640058 F8P00451 2351 aa0.42□□□□□ -2.34
CCDC7-216ENST00000640058 ABCA12Q86UK0 2595 aa0.42□□□□□ -2.34
CCDC7-216ENST00000640058 HTN1P15515 57 aa0.41□□□□□ -2.34
CCDC7-216ENST00000640058 ZNF292O60281 2723 aa0.4□□□□□ -2.35
CCDC7-216ENST00000640058 A0A096LNI7 61 aa0.39□□□□□ -2.35
CCDC7-216ENST00000640058 APELAP0DMC3 54 aa0.39□□□□□ -2.35
CCDC7-216ENST00000640058 CELSR2Q9HCU4 2923 aa0.39□□□□□ -2.35
CCDC7-216ENST00000640058 PKD1L2Q7Z442 2459 aa0.39□□□□□ -2.35
CCDC7-216ENST00000640058 DSPP15924 2871 aaKnown RBP0.39□□□□□ -2.35
CCDC7-216ENST00000640058 GVINP1Q7Z2Y8 2422 aa0.38□□□□□ -2.35
CCDC7-216ENST00000640058 TENM4Q6N022 2769 aa0.38□□□□□ -2.35
CCDC7-216ENST00000640058 POLQO75417 2590 aa0.38□□□□□ -2.35
CCDC7-216ENST00000640058 PRM1P04553 51 aa0.38□□□□□ -2.35
CCDC7-216ENST00000640058 KRTAP2-3P0C7H8 128 aa0.38□□□□□ -2.35
CCDC7-216ENST00000640058 KRTAP2-4Q9BYR9 128 aa0.38□□□□□ -2.35
CCDC7-216ENST00000640058 KRTAP2-1Q9BYU5 128 aa0.38□□□□□ -2.35
CCDC7-216ENST00000640058 EP300Q09472 2414 aaPredicted RBP0.38□□□□□ -2.35
CCDC7-216ENST00000640058 CEP290O15078 2479 aa0.38□□□□□ -2.35
CCDC7-216ENST00000640058 PRRC2CQ9Y520 2896 aaKnown RBP0.37□□□□□ -2.35
CCDC7-216ENST00000640058 TRANK1O15050 2925 aa0.37□□□□□ -2.35
CCDC7-216ENST00000640058 Q9Y3F1 56 aa0.37□□□□□ -2.35
CCDC7-216ENST00000640058 COL6A5A8TX70 2615 aa0.37□□□□□ -2.35
CCDC7-216ENST00000640058 DEFB136Q30KP8 78 aa0.36□□□□□ -2.35
CCDC7-216ENST00000640058 DEFB133Q30KQ1 61 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms