RNA–Protein interactions for RNA: ENST00000639702.1

RBM39-245, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 5,914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-245ENST00000639702 H1FX-AS1Q4G0G2 97 aa7.2□□□□□ -1.26
RBM39-245ENST00000639702 RPS29P62273 56 aaKnown RBP7.19□□□□□ -1.26
RBM39-245ENST00000639702 ROMO1P60602 79 aa7.17□□□□□ -1.26
RBM39-245ENST00000639702 M0QZ58 72 aa7.17□□□□□ -1.26
RBM39-245ENST00000639702 CYSTM1Q9H1C7 97 aa7.15□□□□□ -1.26
RBM39-245ENST00000639702 ASB16-AS1Q495Z4 193 aa7.15□□□□□ -1.26
RBM39-245ENST00000639702 PLAC4Q8WY50 150 aa7.15□□□□□ -1.27
RBM39-245ENST00000639702 PANO1I0J062 215 aa7.14□□□□□ -1.27
RBM39-245ENST00000639702 FLNAP21333 2647 aaKnown RBP7.14□□□□□ -1.27
RBM39-245ENST00000639702 KRTAP29-1A8MX34 341 aaPredicted RBP7.13□□□□□ -1.27
RBM39-245ENST00000639702 ADM2Q7Z4H4 148 aa7.11□□□□□ -1.27
RBM39-245ENST00000639702 A0A0A0MQY5 61 aa7.11□□□□□ -1.27
RBM39-245ENST00000639702 MGAM2Q2M2H8 2515 aa7.1□□□□□ -1.27
RBM39-245ENST00000639702 PRAC1Q96KF2 57 aa7.1□□□□□ -1.27
RBM39-245ENST00000639702 A0A087X002 238 aa7.1□□□□□ -1.27
RBM39-245ENST00000639702 ITPR3Q14573 2671 aa7.09□□□□□ -1.27
RBM39-245ENST00000639702 Q6ZRN7 208 aaPredicted RBP7.05□□□□□ -1.28
RBM39-245ENST00000639702 FLNBO75369 2602 aaKnown RBP7.04□□□□□ -1.28
RBM39-245ENST00000639702 USP24Q9UPU5 2620 aa7.03□□□□□ -1.28
RBM39-245ENST00000639702 HELZ2Q9BYK8 2649 aaKnown RBP7.02□□□□□ -1.29
RBM39-245ENST00000639702 KRTAP21-3Q3LHN1 58 aa6.99□□□□□ -1.29
RBM39-245ENST00000639702 SPATA8Q6RVD6 105 aa6.98□□□□□ -1.29
RBM39-245ENST00000639702 ATRQ13535 2644 aa6.97□□□□□ -1.29
RBM39-245ENST00000639702 NOTCH2NLQ7Z3S9 236 aa6.95□□□□□ -1.3
RBM39-245ENST00000639702 KRTAP11-1Q8IUC1 163 aa6.95□□□□□ -1.3
RBM39-245ENST00000639702 BPTFQ12830 3046 aa6.93□□□□□ -1.3
RBM39-245ENST00000639702 GOLGB1Q14789 3259 aaKnown RBP6.93□□□□□ -1.3
RBM39-245ENST00000639702 KRTAP13-1Q8IUC0 172 aa6.93□□□□□ -1.3
RBM39-245ENST00000639702 KRTAP7-1Q8IUC3 87 aa6.9□□□□□ -1.3
RBM39-245ENST00000639702 MAST4O15021 2626 aa6.9□□□□□ -1.3
RBM39-245ENST00000639702 KRTAP13-2Q52LG2 175 aa6.9□□□□□ -1.3
RBM39-245ENST00000639702 A8MUU9 505 aa6.9□□□□□ -1.31
RBM39-245ENST00000639702 DNAH12Q6ZR08 3092 aa6.87□□□□□ -1.31
RBM39-245ENST00000639702 CFAP46Q8IYW2 2715 aa6.85□□□□□ -1.31
RBM39-245ENST00000639702 H3BS24 57 aa6.83□□□□□ -1.32
RBM39-245ENST00000639702 C20orf166-AS1Q96NR2 134 aa6.81□□□□□ -1.32
RBM39-245ENST00000639702 PRRC2CQ9Y520 2896 aaKnown RBP6.81□□□□□ -1.32
RBM39-245ENST00000639702 CHD7Q9P2D1 2997 aa6.78□□□□□ -1.32
RBM39-245ENST00000639702 KRTAP25-1Q3LHN0 102 aa6.77□□□□□ -1.33
RBM39-245ENST00000639702 UTRNP46939 3433 aa6.76□□□□□ -1.33
RBM39-245ENST00000639702 A8MU10 97 aa6.75□□□□□ -1.33
RBM39-245ENST00000639702 A6NN06 94 aa6.72□□□□□ -1.33
RBM39-245ENST00000639702 CHD9Q3L8U1 2897 aa6.72□□□□□ -1.33
RBM39-245ENST00000639702 TNP1P09430 55 aa6.7□□□□□ -1.34
RBM39-245ENST00000639702 STAB1Q9NY15 2570 aa6.69□□□□□ -1.34
RBM39-245ENST00000639702 C5orf42Q9H799 3197 aa6.65□□□□□ -1.35
RBM39-245ENST00000639702 NBEAL1Q6ZS30 2694 aa6.63□□□□□ -1.35
RBM39-245ENST00000639702 TEX15Q9BXT5 2789 aa6.62□□□□□ -1.35
RBM39-245ENST00000639702 ZNF292O60281 2723 aa6.6□□□□□ -1.35
RBM39-245ENST00000639702 KRTAP16-1A8MUX0 517 aa6.59□□□□□ -1.35
RBM39-245ENST00000639702 CHD6Q8TD26 2715 aa6.58□□□□□ -1.36
RBM39-245ENST00000639702 XP32Q5T750 250 aa6.58□□□□□ -1.36
RBM39-245ENST00000639702 KMT2BQ9UMN6 2715 aaPredicted RBP6.58□□□□□ -1.36
RBM39-245ENST00000639702 TRANK1O15050 2925 aa6.58□□□□□ -1.36
RBM39-245ENST00000639702 KRTAP1-4P0C5Y4 121 aa6.57□□□□□ -1.36
RBM39-245ENST00000639702 TEP1Q99973 2627 aaKnown RBP6.57□□□□□ -1.36
RBM39-245ENST00000639702 DMBT1Q9UGM3 2413 aaPredicted RBP6.56□□□□□ -1.36
RBM39-245ENST00000639702 UNC79Q9P2D8 2635 aa6.55□□□□□ -1.36
RBM39-245ENST00000639702 PP632Q6XCG6 107 aa6.55□□□□□ -1.36
RBM39-245ENST00000639702 COL6A5A8TX70 2615 aa6.54□□□□□ -1.36
RBM39-245ENST00000639702 CEP350Q5VT06 3117 aa6.54□□□□□ -1.36
RBM39-245ENST00000639702 TPRXLQ17RH7 258 aa6.54□□□□□ -1.36
RBM39-245ENST00000639702 FLG2Q5D862 2391 aaPredicted RBP6.53□□□□□ -1.36
RBM39-245ENST00000639702 GCN1Q92616 2671 aaKnown RBP6.52□□□□□ -1.37
RBM39-245ENST00000639702 AKAP13Q12802 2813 aa6.51□□□□□ -1.37
RBM39-245ENST00000639702 MGAQ8IWI9 3026 aa6.5□□□□□ -1.37
RBM39-245ENST00000639702 BAHCC1Q9P281 2608 aa6.5□□□□□ -1.37
RBM39-245ENST00000639702 HTTP42858 3142 aa6.5□□□□□ -1.37
RBM39-245ENST00000639702 IGSF10Q6WRI0 2623 aa6.49□□□□□ -1.37
RBM39-245ENST00000639702 CENPEQ02224 2701 aa6.48□□□□□ -1.37
RBM39-245ENST00000639702 SETXQ7Z333 2677 aaKnown RBP6.47□□□□□ -1.37
RBM39-245ENST00000639702 C10orf95Q9H7T3 257 aa6.47□□□□□ -1.37
RBM39-245ENST00000639702 KRTAP10-8P60410 259 aa6.45□□□□□ -1.38
RBM39-245ENST00000639702 NSD1Q96L73 2696 aaPredicted RBP6.44□□□□□ -1.38
RBM39-245ENST00000639702 ITPR2Q14571 2701 aa6.43□□□□□ -1.38
RBM39-245ENST00000639702 NDUFAF8A1L188 74 aa6.42□□□□□ -1.38
RBM39-245ENST00000639702 A0A1B0GVY2 172 aa6.4□□□□□ -1.39
RBM39-245ENST00000639702 NOTCH1P46531 2555 aa6.39□□□□□ -1.39
RBM39-245ENST00000639702 PCNTO95613 3336 aa6.39□□□□□ -1.39
RBM39-245ENST00000639702 PRO2289Q9P1D8 64 aa6.38□□□□□ -1.39
RBM39-245ENST00000639702 KRTAP13-3Q3SY46 172 aa6.36□□□□□ -1.39
RBM39-245ENST00000639702 NBEAL2Q6ZNJ1 2754 aa6.36□□□□□ -1.39
RBM39-245ENST00000639702 KRTAP10-10P60014 251 aa6.35□□□□□ -1.39
RBM39-245ENST00000639702 MAP1AP78559 2803 aaPredicted RBP6.32□□□□□ -1.4
RBM39-245ENST00000639702 H0YAA0 97 aa6.32□□□□□ -1.4
RBM39-245ENST00000639702 CFAP54Q96N23 3096 aa6.31□□□□□ -1.4
RBM39-245ENST00000639702 STAB2Q8WWQ8 2551 aa6.28□□□□□ -1.4
RBM39-245ENST00000639702 A0A0C4DFX4 3053 aa6.27□□□□□ -1.41
RBM39-245ENST00000639702 UBR5O95071 2799 aaPredicted RBP6.27□□□□□ -1.41
RBM39-245ENST00000639702 DSPP15924 2871 aaKnown RBP6.26□□□□□ -1.41
RBM39-245ENST00000639702 RANBP2P49792 3224 aaKnown RBP6.25□□□□□ -1.41
RBM39-245ENST00000639702 P0C880 135 aa6.25□□□□□ -1.41
RBM39-245ENST00000639702 MKI67P46013 3256 aaKnown RBP6.23□□□□□ -1.41
RBM39-245ENST00000639702 BRCA2P51587 3418 aa6.2□□□□□ -1.42
RBM39-245ENST00000639702 ITPR1Q14643 2758 aa6.19□□□□□ -1.42
RBM39-245ENST00000639702 WDFY4Q6ZS81 3184 aa6.19□□□□□ -1.42
RBM39-245ENST00000639702 LAMA3Q16787 3333 aa6.15□□□□□ -1.43
RBM39-245ENST00000639702 TRIOO75962 3097 aa6.14□□□□□ -1.43
RBM39-245ENST00000639702 HIVEP1P15822 2718 aa6.14□□□□□ -1.43
RBM39-245ENST00000639702 PRUNE2Q8WUY3 3088 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms