RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 MRPL55Q7Z7F7 128 aaKnown RBP13□□□□□ -0.33
PMS1-222ENST00000639501 SEC61GP60059 68 aa12.99□□□□□ -0.33
PMS1-222ENST00000639501 NBEAL1Q6ZS30 2694 aa12.98□□□□□ -0.33
PMS1-222ENST00000639501 A8MU10 97 aa12.98□□□□□ -0.33
PMS1-222ENST00000639501 A8MUN3 132 aa12.98□□□□□ -0.33
PMS1-222ENST00000639501 RPL37AP61513 92 aaKnown RBP12.97□□□□□ -0.33
PMS1-222ENST00000639501 MGAM2Q2M2H8 2515 aa12.96□□□□□ -0.34
PMS1-222ENST00000639501 A0A087WSZ3 146 aa12.94□□□□□ -0.34
PMS1-222ENST00000639501 DEFB131BA0A096LNP1 70 aa12.94□□□□□ -0.34
PMS1-222ENST00000639501 DNAH10OSP0CZ25 163 aa12.94□□□□□ -0.34
PMS1-222ENST00000639501 LINC00208Q96KT6 92 aa12.94□□□□□ -0.34
PMS1-222ENST00000639501 REG3GQ6UW15 175 aa12.93□□□□□ -0.34
PMS1-222ENST00000639501 KRTAP10-11P60412 298 aa12.91□□□□□ -0.34
PMS1-222ENST00000639501 NDUFB1O75438 58 aa12.91□□□□□ -0.34
PMS1-222ENST00000639501 PMAIP1Q13794 54 aa12.91□□□□□ -0.34
PMS1-222ENST00000639501 PRLHP81277 87 aa12.9□□□□□ -0.34
PMS1-222ENST00000639501 MP68P56378 58 aa12.9□□□□□ -0.34
PMS1-222ENST00000639501 B9D2Q9BPU9 175 aa12.9□□□□□ -0.34
PMS1-222ENST00000639501 KRTAP29-1A8MX34 341 aaPredicted RBP12.89□□□□□ -0.35
PMS1-222ENST00000639501 Q5VV11 94 aa12.89□□□□□ -0.35
PMS1-222ENST00000639501 DNAH10Q8IVF4 4471 aa12.87□□□□□ -0.35
PMS1-222ENST00000639501 SRRM2Q9UQ35 2752 aaKnown RBP12.86□□□□□ -0.35
PMS1-222ENST00000639501 DNAH3Q8TD57 4116 aa12.86□□□□□ -0.35
PMS1-222ENST00000639501 DNHD1Q96M86 4753 aa12.85□□□□□ -0.35
PMS1-222ENST00000639501 H0Y9P7 68 aa12.84□□□□□ -0.35
PMS1-222ENST00000639501 C11orf45Q8TAV5 145 aa12.84□□□□□ -0.35
PMS1-222ENST00000639501 LINC00588Q9Y4M8 146 aa12.84□□□□□ -0.35
PMS1-222ENST00000639501 CNBPP62633 177 aaKnown RBP12.82□□□□□ -0.36
PMS1-222ENST00000639501 IGLV8-61A0A075B6I0 122 aa12.81□□□□□ -0.36
PMS1-222ENST00000639501 CASC2Q6XLA1 102 aa12.81□□□□□ -0.36
PMS1-222ENST00000639501 Q8N9P0 234 aaPredicted RBP12.8□□□□□ -0.36
PMS1-222ENST00000639501 SPANXA2-OT1Q8N9U9 137 aa12.78□□□□□ -0.36
PMS1-222ENST00000639501 CSMD3Q7Z407 3707 aa12.77□□□□□ -0.36
PMS1-222ENST00000639501 IGKV2-24A0A0C4DH68 120 aa12.77□□□□□ -0.37
PMS1-222ENST00000639501 A0A096LNI7 61 aa12.76□□□□□ -0.37
PMS1-222ENST00000639501 LYSTQ99698 3801 aa12.76□□□□□ -0.37
PMS1-222ENST00000639501 UBE2AP49459 152 aa12.75□□□□□ -0.37
PMS1-222ENST00000639501 C9orf163Q8N9P6 203 aa12.74□□□□□ -0.37
PMS1-222ENST00000639501 CHKB-CPT1BH3BT56 60 aa12.73□□□□□ -0.37
PMS1-222ENST00000639501 PRR15LQ9BU68 103 aa12.73□□□□□ -0.37
PMS1-222ENST00000639501 KRTAP11-1Q8IUC1 163 aa12.73□□□□□ -0.37
PMS1-222ENST00000639501 C16orf90A8MZG2 172 aa12.71□□□□□ -0.37
PMS1-222ENST00000639501 A8MWP4 228 aa12.7□□□□□ -0.38
PMS1-222ENST00000639501 LINC00472Q9H8W2 130 aa12.7□□□□□ -0.38
PMS1-222ENST00000639501 H3BPC8 53 aa12.69□□□□□ -0.38
PMS1-222ENST00000639501 LIMD2Q9BT23 127 aa12.68□□□□□ -0.38
PMS1-222ENST00000639501 DNAH9Q9NYC9 4486 aa12.67□□□□□ -0.38
PMS1-222ENST00000639501 K7EIL1 84 aa12.65□□□□□ -0.38
PMS1-222ENST00000639501 COA5Q86WW8 74 aa12.65□□□□□ -0.38
PMS1-222ENST00000639501 MMP24-AS1A0A0U1RRL7 71 aa12.64□□□□□ -0.39
PMS1-222ENST00000639501 TENM2Q9NT68 2774 aa12.64□□□□□ -0.39
PMS1-222ENST00000639501 LCA10Q71F78 164 aa12.63□□□□□ -0.39
PMS1-222ENST00000639501 PHF5AQ7RTV0 110 aaKnown RBP12.63□□□□□ -0.39
PMS1-222ENST00000639501 H0Y9J4 135 aa12.62□□□□□ -0.39
PMS1-222ENST00000639501 CHTF8P0CG12 524 aa12.62□□□□□ -0.39
PMS1-222ENST00000639501 SPTSSBQ8NFR3 76 aa12.6□□□□□ -0.39
PMS1-222ENST00000639501 KRTAP1-5Q9BYS1 174 aa12.6□□□□□ -0.39
PMS1-222ENST00000639501 HUWE1Q7Z6Z7 4374 aaKnown RBP12.6□□□□□ -0.39
PMS1-222ENST00000639501 PCOTHQ58A44 107 aa12.59□□□□□ -0.39
PMS1-222ENST00000639501 Q75L30 129 aa12.58□□□□□ -0.4
PMS1-222ENST00000639501 IGLV7-46A0A075B6I9 117 aa12.58□□□□□ -0.4
PMS1-222ENST00000639501 SPRR1BP22528 89 aa12.58□□□□□ -0.4
PMS1-222ENST00000639501 COL7A1Q02388 2944 aa12.56□□□□□ -0.4
PMS1-222ENST00000639501 LOC101927531A0A1B0GV80 90 aa12.55□□□□□ -0.4
PMS1-222ENST00000639501 A6NED7 52 aa12.55□□□□□ -0.4
PMS1-222ENST00000639501 CD164Q04900 197 aa12.55□□□□□ -0.4
PMS1-222ENST00000639501 KTN1-AS1Q86SY8 53 aa12.51□□□□□ -0.41
PMS1-222ENST00000639501 STAB2Q8WWQ8 2551 aa12.5□□□□□ -0.41
PMS1-222ENST00000639501 KRTAP21-3Q3LHN1 58 aa12.5□□□□□ -0.41
PMS1-222ENST00000639501 MEGF8Q7Z7M0 2845 aa12.5□□□□□ -0.41
PMS1-222ENST00000639501 Q96NJ1 140 aa12.5□□□□□ -0.41
PMS1-222ENST00000639501 SPAG11AQ6PDA7 123 aa12.48□□□□□ -0.41
PMS1-222ENST00000639501 ATP11AUNQ6ZP68 121 aa12.47□□□□□ -0.41
PMS1-222ENST00000639501 A6NN06 94 aa12.45□□□□□ -0.42
PMS1-222ENST00000639501 ASB16-AS1Q495Z4 193 aa12.45□□□□□ -0.42
PMS1-222ENST00000639501 PRKDCP78527 4128 aaKnown RBP12.44□□□□□ -0.42
PMS1-222ENST00000639501 PLAC8Q9NZF1 115 aa12.43□□□□□ -0.42
PMS1-222ENST00000639501 CDC42SE1Q9NRR8 79 aa12.42□□□□□ -0.42
PMS1-222ENST00000639501 DNAH7Q8WXX0 4024 aa12.41□□□□□ -0.42
PMS1-222ENST00000639501 IGLV9-49A0A0B4J1Y8 123 aa12.41□□□□□ -0.42
PMS1-222ENST00000639501 LINC01558Q9Y6Z2 57 aa12.41□□□□□ -0.42
PMS1-222ENST00000639501 PANO1I0J062 215 aa12.4□□□□□ -0.42
PMS1-222ENST00000639501 Q6ZR54 194 aa12.4□□□□□ -0.42
PMS1-222ENST00000639501 C8orf17Q9NRJ1 99 aa12.4□□□□□ -0.42
PMS1-222ENST00000639501 RBM12B-AS1Q9P1G2 102 aa12.4□□□□□ -0.42
PMS1-222ENST00000639501 HRES1P13985 223 aa12.38□□□□□ -0.43
PMS1-222ENST00000639501 MOBPQ13875 183 aa12.38□□□□□ -0.43
PMS1-222ENST00000639501 KRTAP13-1Q8IUC0 172 aa12.38□□□□□ -0.43
PMS1-222ENST00000639501 SPINK7P58062 85 aa12.37□□□□□ -0.43
PMS1-222ENST00000639501 TP53AIP1Q9HCN2 124 aa12.37□□□□□ -0.43
PMS1-222ENST00000639501 NDUFS5O43920 106 aa12.37□□□□□ -0.43
PMS1-222ENST00000639501 IGHV6-1A0A0B4J1U7 121 aa12.35□□□□□ -0.43
PMS1-222ENST00000639501 A0A087X002 238 aa12.32□□□□□ -0.44
PMS1-222ENST00000639501 NOTCH2NLQ7Z3S9 236 aa12.32□□□□□ -0.44
PMS1-222ENST00000639501 FRAS1Q86XX4 4008 aa12.31□□□□□ -0.44
PMS1-222ENST00000639501 A0A1B0GVX0 72 aa12.3□□□□□ -0.44
PMS1-222ENST00000639501 FBN3Q75N90 2809 aa12.27□□□□□ -0.45
PMS1-222ENST00000639501 MRPL34Q9BQ48 92 aaKnown RBP12.26□□□□□ -0.45
PMS1-222ENST00000639501 C14orf177Q52M58 125 aa12.25□□□□□ -0.45
PMS1-222ENST00000639501 TGP01266 2768 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms