RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 ANAPC11Q9NYG5 84 aa9.3□□□□□ -0.92
SCARB2-216ENST00000639300 NIPBLQ6KC79 2804 aaeCLIP9.3□□□□□ -0.92
SCARB2-216ENST00000639300 A8MWP4 228 aa9.29□□□□□ -0.92
SCARB2-216ENST00000639300 OBSCN-AS1Q96MR7 158 aa9.29□□□□□ -0.92
SCARB2-216ENST00000639300 LAMA5O15230 3695 aa9.29□□□□□ -0.92
SCARB2-216ENST00000639300 K7ERS5 55 aa9.28□□□□□ -0.92
SCARB2-216ENST00000639300 KLKP1Q107X0 134 aa9.28□□□□□ -0.92
SCARB2-216ENST00000639300 SPAG11AQ6PDA7 123 aa9.28□□□□□ -0.92
SCARB2-216ENST00000639300 PLA2G2DQ9UNK4 145 aa9.27□□□□□ -0.93
SCARB2-216ENST00000639300 H7BZZ5 65 aa9.26□□□□□ -0.93
SCARB2-216ENST00000639300 A0A087WTM6 91 aa9.25□□□□□ -0.93
SCARB2-216ENST00000639300 PRO0628Q9UI54 55 aa9.25□□□□□ -0.93
SCARB2-216ENST00000639300 PRR15Q8IV56 129 aa9.24□□□□□ -0.93
SCARB2-216ENST00000639300 HRNRQ86YZ3 2850 aaPredicted RBP9.24□□□□□ -0.93
SCARB2-216ENST00000639300 KMT2BQ9UMN6 2715 aaPredicted RBP9.24□□□□□ -0.93
SCARB2-216ENST00000639300 H3BPC8 53 aa9.23□□□□□ -0.93
SCARB2-216ENST00000639300 LINC00313P59037 77 aa9.23□□□□□ -0.93
SCARB2-216ENST00000639300 APLNQ9ULZ1 77 aa9.22□□□□□ -0.93
SCARB2-216ENST00000639300 TYMSOSQ8TAI1 123 aa9.22□□□□□ -0.93
SCARB2-216ENST00000639300 IGLV5-48A0A075B6I7 105 aa9.21□□□□□ -0.94
SCARB2-216ENST00000639300 ZNF861PO60384 105 aa9.2□□□□□ -0.94
SCARB2-216ENST00000639300 WWC2-AS2Q96NR7 200 aa9.2□□□□□ -0.94
SCARB2-216ENST00000639300 MRPL34Q9BQ48 92 aaKnown RBP9.19□□□□□ -0.94
SCARB2-216ENST00000639300 WIPF1O43516 503 aa9.19□□□□□ -0.94
SCARB2-216ENST00000639300 CNBPP62633 177 aaKnown RBP9.19□□□□□ -0.94
SCARB2-216ENST00000639300 DMDP11532 3685 aa9.18□□□□□ -0.94
SCARB2-216ENST00000639300 PLA2G1BP04054 148 aaKnown RBP9.18□□□□□ -0.94
SCARB2-216ENST00000639300 PSORS1C2Q9UIG4 136 aa9.18□□□□□ -0.94
SCARB2-216ENST00000639300 ACYP2P14621 99 aa9.18□□□□□ -0.94
SCARB2-216ENST00000639300 C7orf65Q6ZTY9 151 aa9.17□□□□□ -0.94
SCARB2-216ENST00000639300 C8orf17Q9NRJ1 99 aa9.16□□□□□ -0.94
SCARB2-216ENST00000639300 A8MUN3 132 aa9.16□□□□□ -0.94
SCARB2-216ENST00000639300 A0A1B0GU69 56 aa9.14□□□□□ -0.95
SCARB2-216ENST00000639300 ZFHX4Q86UP3 3567 aa9.14□□□□□ -0.95
SCARB2-216ENST00000639300 IGLV5-37A0A075B6J1 123 aa9.13□□□□□ -0.95
SCARB2-216ENST00000639300 Q96NJ1 140 aa9.13□□□□□ -0.95
SCARB2-216ENST00000639300 DSCR10P59022 87 aa9.12□□□□□ -0.95
SCARB2-216ENST00000639300 SPRR4Q96PI1 79 aa9.12□□□□□ -0.95
SCARB2-216ENST00000639300 A0A1B0GVX0 72 aa9.11□□□□□ -0.95
SCARB2-216ENST00000639300 COA5Q86WW8 74 aa9.1□□□□□ -0.95
SCARB2-216ENST00000639300 LOC101927531A0A1B0GV80 90 aa9.1□□□□□ -0.95
SCARB2-216ENST00000639300 IGLV8-61A0A075B6I0 122 aa9.1□□□□□ -0.95
SCARB2-216ENST00000639300 TENM4Q6N022 2769 aa9.09□□□□□ -0.95
SCARB2-216ENST00000639300 FAM229AH3BQW9 127 aa9.09□□□□□ -0.95
SCARB2-216ENST00000639300 SSBP3-AS1Q7Z2R9 100 aa9.09□□□□□ -0.95
SCARB2-216ENST00000639300 SMR3BP02814 79 aaPredicted RBP9.08□□□□□ -0.96
SCARB2-216ENST00000639300 LINC00336Q6ZUF6 198 aa9.08□□□□□ -0.96
SCARB2-216ENST00000639300 OCR1Q9BZK8 76 aa9.08□□□□□ -0.96
SCARB2-216ENST00000639300 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.07□□□□□ -0.96
SCARB2-216ENST00000639300 IGLV7-43P04211 117 aa9.07□□□□□ -0.96
SCARB2-216ENST00000639300 MXRA5Q9NR99 2828 aa9.06□□□□□ -0.96
SCARB2-216ENST00000639300 C8orf87E5RJ46 101 aa9.06□□□□□ -0.96
SCARB2-216ENST00000639300 CYSTM1Q9H1C7 97 aa9.05□□□□□ -0.96
SCARB2-216ENST00000639300 KRTAP26-1Q6PEX3 210 aa9.03□□□□□ -0.96
SCARB2-216ENST00000639300 TNP2Q05952 138 aa9.03□□□□□ -0.96
SCARB2-216ENST00000639300 KRTAP1-5Q9BYS1 174 aa9.02□□□□□ -0.96
SCARB2-216ENST00000639300 FLG2Q5D862 2391 aaPredicted RBP9.02□□□□□ -0.96
SCARB2-216ENST00000639300 SPRR1AP35321 89 aa9□□□□□ -0.97
SCARB2-216ENST00000639300 ATP11AUNQ6ZP68 121 aa9□□□□□ -0.97
SCARB2-216ENST00000639300 LINC00304Q8N9R0 145 aa8.96□□□□□ -0.98
SCARB2-216ENST00000639300 C9orf92A6NGG3 77 aa8.95□□□□□ -0.98
SCARB2-216ENST00000639300 CELSR1Q9NYQ6 3014 aa8.93□□□□□ -0.98
SCARB2-216ENST00000639300 DMBT1Q9UGM3 2413 aaPredicted RBP8.92□□□□□ -0.98
SCARB2-216ENST00000639300 CYP4F30PQ9H0H9 118 aa8.9□□□□□ -0.99
SCARB2-216ENST00000639300 PRR26Q8N8Z3 221 aa8.89□□□□□ -0.99
SCARB2-216ENST00000639300 SPANXA2-OT1Q8N9U9 137 aa8.87□□□□□ -0.99
SCARB2-216ENST00000639300 UQCR11O14957 56 aa8.83□□□□□ -1
SCARB2-216ENST00000639300 Q8N1X5 172 aa8.83□□□□□ -1
SCARB2-216ENST00000639300 MMP24-AS1A0A0U1RRL7 71 aa8.82□□□□□ -1
SCARB2-216ENST00000639300 LINC00472Q9H8W2 130 aa8.81□□□□□ -1
SCARB2-216ENST00000639300 FAM229BQ4G0N7 80 aa8.8□□□□□ -1
SCARB2-216ENST00000639300 SMG1Q96Q15 3661 aaKnown RBP8.8□□□□□ -1
SCARB2-216ENST00000639300 SPRR1BP22528 89 aa8.8□□□□□ -1
SCARB2-216ENST00000639300 PLAC8Q9NZF1 115 aa8.8□□□□□ -1
SCARB2-216ENST00000639300 PANO1I0J062 215 aa8.79□□□□□ -1
SCARB2-216ENST00000639300 CUBNO60494 3623 aa8.79□□□□□ -1
SCARB2-216ENST00000639300 KRTAP4-16G5E9R7 235 aaPredicted RBP8.78□□□□□ -1
SCARB2-216ENST00000639300 FP248Q71RG6 208 aaPredicted RBP8.78□□□□□ -1
SCARB2-216ENST00000639300 CSMD1Q96PZ7 3565 aa8.77□□□□□ -1.01
SCARB2-216ENST00000639300 MIR22HGQ0VDD5 57 aa8.75□□□□□ -1.01
SCARB2-216ENST00000639300 Q5XG85 94 aa8.75□□□□□ -1.01
SCARB2-216ENST00000639300 IGLV7-46A0A075B6I9 117 aa8.75□□□□□ -1.01
SCARB2-216ENST00000639300 TENM3Q9P273 2699 aa8.74□□□□□ -1.01
SCARB2-216ENST00000639300 OXTP01178 125 aa8.74□□□□□ -1.01
SCARB2-216ENST00000639300 Q8N9P0 234 aaPredicted RBP8.74□□□□□ -1.01
SCARB2-216ENST00000639300 CD164Q04900 197 aa8.73□□□□□ -1.01
SCARB2-216ENST00000639300 HRES1P13985 223 aa8.72□□□□□ -1.01
SCARB2-216ENST00000639300 Q1T7F1 81 aa8.71□□□□□ -1.01
SCARB2-216ENST00000639300 SVEP1Q4LDE5 3571 aa8.7□□□□□ -1.02
SCARB2-216ENST00000639300 FBN1P35555 2871 aaKnown RBP8.69□□□□□ -1.02
SCARB2-216ENST00000639300 TENM1Q9UKZ4 2725 aa8.68□□□□□ -1.02
SCARB2-216ENST00000639300 KRTAP10-2P60368 255 aa8.66□□□□□ -1.02
SCARB2-216ENST00000639300 KRTAP11-1Q8IUC1 163 aa8.66□□□□□ -1.02
SCARB2-216ENST00000639300 KRTAP7-1Q8IUC3 87 aa8.65□□□□□ -1.02
SCARB2-216ENST00000639300 PKD1L1Q8TDX9 2849 aa8.65□□□□□ -1.03
SCARB2-216ENST00000639300 CDC42SE1Q9NRR8 79 aa8.62□□□□□ -1.03
SCARB2-216ENST00000639300 J3QL48 77 aa8.62□□□□□ -1.03
SCARB2-216ENST00000639300 KRTAP10-1P60331 282 aa8.62□□□□□ -1.03
SCARB2-216ENST00000639300 PDZD2O15018 2839 aa8.6□□□□□ -1.03
SCARB2-216ENST00000639300 VWFP04275 2813 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms