RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 PRR9Q5T870 116 aa2.75□□□□□ -1.97
SCN3A-209ENST00000639244 RANBP2P49792 3224 aaKnown RBP2.75□□□□□ -1.97
SCN3A-209ENST00000639244 PRR34Q9NV39 138 aa2.74□□□□□ -1.97
SCN3A-209ENST00000639244 FRYLO94915 3013 aa2.74□□□□□ -1.97
SCN3A-209ENST00000639244 ACYP2P14621 99 aa2.74□□□□□ -1.97
SCN3A-209ENST00000639244 SPRR4Q96PI1 79 aa2.74□□□□□ -1.97
SCN3A-209ENST00000639244 FLNBO75369 2602 aaKnown RBP2.74□□□□□ -1.97
SCN3A-209ENST00000639244 Q8IZM0 81 aa2.74□□□□□ -1.97
SCN3A-209ENST00000639244 J3QKU1 62 aa2.73□□□□□ -1.97
SCN3A-209ENST00000639244 DEFB116Q30KQ4 102 aa2.73□□□□□ -1.97
SCN3A-209ENST00000639244 PDZD2O15018 2839 aa2.73□□□□□ -1.97
SCN3A-209ENST00000639244 H3BUA1 57 aa2.73□□□□□ -1.97
SCN3A-209ENST00000639244 P0C880 135 aa2.73□□□□□ -1.97
SCN3A-209ENST00000639244 FLNAP21333 2647 aaKnown RBP2.73□□□□□ -1.97
SCN3A-209ENST00000639244 LINC00315P59091 139 aa2.73□□□□□ -1.97
SCN3A-209ENST00000639244 A8MTW9 85 aa2.72□□□□□ -1.97
SCN3A-209ENST00000639244 LINC00612Q8N6U2 182 aa2.72□□□□□ -1.97
SCN3A-209ENST00000639244 C9orf163Q8N9P6 203 aa2.72□□□□□ -1.97
SCN3A-209ENST00000639244 C6orf48Q9UBA6 75 aa2.72□□□□□ -1.97
SCN3A-209ENST00000639244 RPL37AP61513 92 aaKnown RBP2.72□□□□□ -1.97
SCN3A-209ENST00000639244 LINC00959A0A1B0GUT2 108 aa2.72□□□□□ -1.97
SCN3A-209ENST00000639244 FREM2Q5SZK8 3169 aa2.72□□□□□ -1.97
SCN3A-209ENST00000639244 COL6A3P12111 3177 aa2.71□□□□□ -1.98
SCN3A-209ENST00000639244 PRO0255Q9UI72 69 aa2.71□□□□□ -1.98
SCN3A-209ENST00000639244 K7EQZ3 153 aa2.71□□□□□ -1.98
SCN3A-209ENST00000639244 PLA2G2AP14555 144 aa2.71□□□□□ -1.98
SCN3A-209ENST00000639244 CELSR3Q9NYQ7 3312 aa2.71□□□□□ -1.98
SCN3A-209ENST00000639244 COX6A2Q02221 97 aa2.71□□□□□ -1.98
SCN3A-209ENST00000639244 MXRA5Q9NR99 2828 aa2.71□□□□□ -1.98
SCN3A-209ENST00000639244 Q5W150 140 aa2.71□□□□□ -1.98
SCN3A-209ENST00000639244 CELSR1Q9NYQ6 3014 aa2.71□□□□□ -1.98
SCN3A-209ENST00000639244 SMR3AQ99954 134 aa2.71□□□□□ -1.98
SCN3A-209ENST00000639244 VWFP04275 2813 aa2.71□□□□□ -1.98
SCN3A-209ENST00000639244 SZT2Q5T011 3432 aa2.7□□□□□ -1.98
SCN3A-209ENST00000639244 ZNF861PO60384 105 aa2.7□□□□□ -1.98
SCN3A-209ENST00000639244 C15orf56Q8N910 161 aa2.7□□□□□ -1.98
SCN3A-209ENST00000639244 DMXL1Q9Y485 3027 aa2.7□□□□□ -1.98
SCN3A-209ENST00000639244 KRTAP23-1A1A580 65 aa2.7□□□□□ -1.98
SCN3A-209ENST00000639244 KRTAP26-1Q6PEX3 210 aa2.7□□□□□ -1.98
SCN3A-209ENST00000639244 TENM2Q9NT68 2774 aa2.7□□□□□ -1.98
SCN3A-209ENST00000639244 SPINK1P00995 79 aa2.69□□□□□ -1.98
SCN3A-209ENST00000639244 PCOTHQ58A44 107 aa2.69□□□□□ -1.98
SCN3A-209ENST00000639244 Q6YL49 198 aa2.69□□□□□ -1.98
SCN3A-209ENST00000639244 A0A096LNT2 108 aa2.68□□□□□ -1.98
SCN3A-209ENST00000639244 IGLV6-57P01721 117 aa2.68□□□□□ -1.98
SCN3A-209ENST00000639244 HRES1P13985 223 aa2.68□□□□□ -1.98
SCN3A-209ENST00000639244 TRIOO75962 3097 aa2.68□□□□□ -1.98
SCN3A-209ENST00000639244 UNC80Q8N2C7 3258 aa2.68□□□□□ -1.98
SCN3A-209ENST00000639244 MRGPRG-AS1Q2M3A8 158 aa2.67□□□□□ -1.98
SCN3A-209ENST00000639244 OTOGQ6ZRI0 2925 aa2.67□□□□□ -1.98
SCN3A-209ENST00000639244 UNQ6190/PRO20217Q6UXQ8 127 aa2.67□□□□□ -1.98
SCN3A-209ENST00000639244 Q6ZSN1 163 aa2.67□□□□□ -1.98
SCN3A-209ENST00000639244 PANO1I0J062 215 aa2.67□□□□□ -1.98
SCN3A-209ENST00000639244 DSCR10P59022 87 aa2.66□□□□□ -1.98
SCN3A-209ENST00000639244 PKD1L1Q8TDX9 2849 aa2.66□□□□□ -1.98
SCN3A-209ENST00000639244 LY6G6CO95867 125 aa2.66□□□□□ -1.98
SCN3A-209ENST00000639244 DCHS2Q6V1P9 2916 aa2.66□□□□□ -1.98
SCN3A-209ENST00000639244 IGLV1-40P01703 118 aa2.66□□□□□ -1.98
SCN3A-209ENST00000639244 IGLV5-48A0A075B6I7 105 aa2.65□□□□□ -1.99
SCN3A-209ENST00000639244 A0A1B0GU33 70 aa2.64□□□□□ -1.99
SCN3A-209ENST00000639244 CRIPTQ9P021 101 aa2.64□□□□□ -1.99
SCN3A-209ENST00000639244 ATMQ13315 3056 aa2.64□□□□□ -1.99
SCN3A-209ENST00000639244 PRO3102Q9H379 93 aa2.64□□□□□ -1.99
SCN3A-209ENST00000639244 NIPBLQ6KC79 2804 aaeCLIP2.64□□□□□ -1.99
SCN3A-209ENST00000639244 PRLHP81277 87 aa2.64□□□□□ -1.99
SCN3A-209ENST00000639244 MYO15AQ9UKN7 3530 aa2.64□□□□□ -1.99
SCN3A-209ENST00000639244 KRTAP10-9P60411 292 aa2.63□□□□□ -1.99
SCN3A-209ENST00000639244 CFAP47Q6ZTR5 3102 aa2.63□□□□□ -1.99
SCN3A-209ENST00000639244 A0A087WTM6 91 aa2.63□□□□□ -1.99
SCN3A-209ENST00000639244 LINC00472Q9H8W2 130 aa2.63□□□□□ -1.99
SCN3A-209ENST00000639244 ZZEF1O43149 2961 aa2.63□□□□□ -1.99
SCN3A-209ENST00000639244 TGP01266 2768 aa2.63□□□□□ -1.99
SCN3A-209ENST00000639244 MEGF8Q7Z7M0 2845 aa2.62□□□□□ -1.99
SCN3A-209ENST00000639244 Q96NJ1 140 aa2.62□□□□□ -1.99
SCN3A-209ENST00000639244 HRNRQ86YZ3 2850 aaPredicted RBP2.62□□□□□ -1.99
SCN3A-209ENST00000639244 COL12A1Q99715 3063 aa2.62□□□□□ -1.99
SCN3A-209ENST00000639244 NBDYA0A0U1RRE5 68 aa2.62□□□□□ -1.99
SCN3A-209ENST00000639244 LINC01556Q5JQF7 62 aa2.62□□□□□ -1.99
SCN3A-209ENST00000639244 C14orf177Q52M58 125 aa2.61□□□□□ -1.99
SCN3A-209ENST00000639244 A0A1W2PNN7 141 aa2.61□□□□□ -1.99
SCN3A-209ENST00000639244 LELP1Q5T871 98 aa2.61□□□□□ -1.99
SCN3A-209ENST00000639244 VCANP13611 3396 aa2.61□□□□□ -1.99
SCN3A-209ENST00000639244 BOD1L1Q8NFC6 3051 aa2.61□□□□□ -1.99
SCN3A-209ENST00000639244 IGKV2D-30A0A075B6S6 120 aa2.6□□□□□ -1.99
SCN3A-209ENST00000639244 IGKV2-30P06310 120 aa2.6□□□□□ -1.99
SCN3A-209ENST00000639244 WDFY3Q8IZQ1 3526 aa2.6□□□□□ -1.99
SCN3A-209ENST00000639244 A0A1W2PPR1 153 aa2.6□□□□□ -1.99
SCN3A-209ENST00000639244 LINC00304Q8N9R0 145 aa2.59□□□□□ -1.99
SCN3A-209ENST00000639244 SPEGQ15772 3267 aa2.59□□□□□ -1.99
SCN3A-209ENST00000639244 ANAPC11Q9NYG5 84 aa2.59□□□□□ -2
SCN3A-209ENST00000639244 KRTAP11-1Q8IUC1 163 aa2.58□□□□□ -2
SCN3A-209ENST00000639244 PSORS1C2Q9UIG4 136 aa2.58□□□□□ -2
SCN3A-209ENST00000639244 KRTAP29-1A8MX34 341 aaPredicted RBP2.58□□□□□ -2
SCN3A-209ENST00000639244 KRTAP15-1Q3LI76 137 aa2.57□□□□□ -2
SCN3A-209ENST00000639244 SPTBN5Q9NRC6 3674 aaKnown RBP2.57□□□□□ -2
SCN3A-209ENST00000639244 TENM1Q9UKZ4 2725 aa2.57□□□□□ -2
SCN3A-209ENST00000639244 A0A1B0GUV1 79 aa2.57□□□□□ -2
SCN3A-209ENST00000639244 SPACA4Q8TDM5 124 aa2.57□□□□□ -2
SCN3A-209ENST00000639244 A0A0G2JQZ4 141 aa2.56□□□□□ -2
SCN3A-209ENST00000639244 WWC2-AS2Q96NR7 200 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms