RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 HTTP42858 3142 aa10.51□□□□□ -0.73
HNRNPU-217ENST00000638952 R4GN34 69 aa10.47□□□□□ -0.73
HNRNPU-217ENST00000638952 LINC00472Q9H8W2 130 aa10.46□□□□□ -0.73
HNRNPU-217ENST00000638952 ASB16-AS1Q495Z4 193 aa10.46□□□□□ -0.74
HNRNPU-217ENST00000638952 PLAC8Q9NZF1 115 aa10.44□□□□□ -0.74
HNRNPU-217ENST00000638952 KRTAP26-1Q6PEX3 210 aa10.43□□□□□ -0.74
HNRNPU-217ENST00000638952 H1FX-AS1Q4G0G2 97 aa10.43□□□□□ -0.74
HNRNPU-217ENST00000638952 M0R2T5 61 aa10.43□□□□□ -0.74
HNRNPU-217ENST00000638952 A0A0C4DFX4 3053 aa10.42□□□□□ -0.74
HNRNPU-217ENST00000638952 EPG5Q9HCE0 2579 aa10.42□□□□□ -0.74
HNRNPU-217ENST00000638952 SPRR1BP22528 89 aa10.41□□□□□ -0.74
HNRNPU-217ENST00000638952 MKI67P46013 3256 aaKnown RBP10.41□□□□□ -0.74
HNRNPU-217ENST00000638952 HECTD1Q9ULT8 2610 aa10.38□□□□□ -0.75
HNRNPU-217ENST00000638952 FLNAP21333 2647 aaKnown RBP10.37□□□□□ -0.75
HNRNPU-217ENST00000638952 KRTAP1-5Q9BYS1 174 aa10.37□□□□□ -0.75
HNRNPU-217ENST00000638952 SPATA8Q6RVD6 105 aa10.32□□□□□ -0.76
HNRNPU-217ENST00000638952 CFAP54Q96N23 3096 aa10.31□□□□□ -0.76
HNRNPU-217ENST00000638952 M0QZ58 72 aa10.29□□□□□ -0.76
HNRNPU-217ENST00000638952 ITPR3Q14573 2671 aa10.27□□□□□ -0.76
HNRNPU-217ENST00000638952 USP24Q9UPU5 2620 aa10.27□□□□□ -0.77
HNRNPU-217ENST00000638952 A6NN06 94 aa10.25□□□□□ -0.77
HNRNPU-217ENST00000638952 RANBP2P49792 3224 aaKnown RBP10.25□□□□□ -0.77
HNRNPU-217ENST00000638952 KRTAP25-1Q3LHN0 102 aa10.24□□□□□ -0.77
HNRNPU-217ENST00000638952 TRANK1O15050 2925 aa10.24□□□□□ -0.77
HNRNPU-217ENST00000638952 LAMA3Q16787 3333 aa10.23□□□□□ -0.77
HNRNPU-217ENST00000638952 KRTAP4-16G5E9R7 235 aaPredicted RBP10.23□□□□□ -0.77
HNRNPU-217ENST00000638952 MGAM2Q2M2H8 2515 aa10.22□□□□□ -0.77
HNRNPU-217ENST00000638952 Q6ZR54 194 aa10.21□□□□□ -0.77
HNRNPU-217ENST00000638952 BRCA2P51587 3418 aa10.19□□□□□ -0.78
HNRNPU-217ENST00000638952 NDUFAF8A1L188 74 aa10.17□□□□□ -0.78
HNRNPU-217ENST00000638952 ATRQ13535 2644 aa10.16□□□□□ -0.78
HNRNPU-217ENST00000638952 ADM2Q7Z4H4 148 aa10.15□□□□□ -0.78
HNRNPU-217ENST00000638952 KRTAP29-1A8MX34 341 aaPredicted RBP10.15□□□□□ -0.79
HNRNPU-217ENST00000638952 PLAC4Q8WY50 150 aa10.14□□□□□ -0.79
HNRNPU-217ENST00000638952 PANO1I0J062 215 aa10.14□□□□□ -0.79
HNRNPU-217ENST00000638952 MGAQ8IWI9 3026 aa10.13□□□□□ -0.79
HNRNPU-217ENST00000638952 LAMA2P24043 3122 aaKnown RBP10.13□□□□□ -0.79
HNRNPU-217ENST00000638952 KRTAP10-1P60331 282 aa10.08□□□□□ -0.8
HNRNPU-217ENST00000638952 KRTAP10-2P60368 255 aa10.08□□□□□ -0.8
HNRNPU-217ENST00000638952 FLNBO75369 2602 aaKnown RBP10.07□□□□□ -0.8
HNRNPU-217ENST00000638952 C20orf166-AS1Q96NR2 134 aa10.06□□□□□ -0.8
HNRNPU-217ENST00000638952 UNC80Q8N2C7 3258 aa10.05□□□□□ -0.8
HNRNPU-217ENST00000638952 TRIOO75962 3097 aa10.05□□□□□ -0.8
HNRNPU-217ENST00000638952 A8MU10 97 aa10.03□□□□□ -0.8
HNRNPU-217ENST00000638952 SEC61BP60468 96 aaKnown RBP10.03□□□□□ -0.8
HNRNPU-217ENST00000638952 FLG2Q5D862 2391 aaPredicted RBP10.02□□□□□ -0.81
HNRNPU-217ENST00000638952 A0A087X002 238 aa10□□□□□ -0.81
HNRNPU-217ENST00000638952 NOTCH2NLQ7Z3S9 236 aa10□□□□□ -0.81
HNRNPU-217ENST00000638952 KRTAP11-1Q8IUC1 163 aa9.98□□□□□ -0.81
HNRNPU-217ENST00000638952 CFAP46Q8IYW2 2715 aa9.98□□□□□ -0.81
HNRNPU-217ENST00000638952 CDH23Q9H251 3354 aa9.98□□□□□ -0.81
HNRNPU-217ENST00000638952 MAST4O15021 2626 aa9.97□□□□□ -0.81
HNRNPU-217ENST00000638952 HELZ2Q9BYK8 2649 aaKnown RBP9.96□□□□□ -0.81
HNRNPU-217ENST00000638952 AKAP13Q12802 2813 aa9.96□□□□□ -0.81
HNRNPU-217ENST00000638952 WDFY4Q6ZS81 3184 aa9.96□□□□□ -0.82
HNRNPU-217ENST00000638952 KRTAP7-1Q8IUC3 87 aa9.94□□□□□ -0.82
HNRNPU-217ENST00000638952 XIRP2A4UGR9 3374 aa9.93□□□□□ -0.82
HNRNPU-217ENST00000638952 CHD6Q8TD26 2715 aa9.93□□□□□ -0.82
HNRNPU-217ENST00000638952 CENPEQ02224 2701 aa9.92□□□□□ -0.82
HNRNPU-217ENST00000638952 Q5VSD8 79 aa9.91□□□□□ -0.82
HNRNPU-217ENST00000638952 PRUNE2Q8WUY3 3088 aa9.91□□□□□ -0.82
HNRNPU-217ENST00000638952 DNAH14Q0VDD8 3507 aa9.88□□□□□ -0.83
HNRNPU-217ENST00000638952 GCN1Q92616 2671 aaKnown RBP9.88□□□□□ -0.83
HNRNPU-217ENST00000638952 LCE6AA0A183 80 aa9.88□□□□□ -0.83
HNRNPU-217ENST00000638952 ZNF292O60281 2723 aa9.86□□□□□ -0.83
HNRNPU-217ENST00000638952 CELSR3Q9NYQ7 3312 aa9.83□□□□□ -0.84
HNRNPU-217ENST00000638952 FRYQ5TBA9 3013 aa9.82□□□□□ -0.84
HNRNPU-217ENST00000638952 VPS13AQ96RL7 3174 aa9.8□□□□□ -0.84
HNRNPU-217ENST00000638952 A8MUU9 505 aa9.79□□□□□ -0.84
HNRNPU-217ENST00000638952 Q6ZRN7 208 aaPredicted RBP9.78□□□□□ -0.84
HNRNPU-217ENST00000638952 UNC79Q9P2D8 2635 aa9.76□□□□□ -0.85
HNRNPU-217ENST00000638952 C10orf95Q9H7T3 257 aa9.76□□□□□ -0.85
HNRNPU-217ENST00000638952 DMBT1Q9UGM3 2413 aaPredicted RBP9.74□□□□□ -0.85
HNRNPU-217ENST00000638952 NBEAL2Q6ZNJ1 2754 aa9.74□□□□□ -0.85
HNRNPU-217ENST00000638952 TEX15Q9BXT5 2789 aa9.72□□□□□ -0.85
HNRNPU-217ENST00000638952 KRTAP13-1Q8IUC0 172 aa9.71□□□□□ -0.85
HNRNPU-217ENST00000638952 VCANP13611 3396 aa9.71□□□□□ -0.85
HNRNPU-217ENST00000638952 SZT2Q5T011 3432 aa9.7□□□□□ -0.86
HNRNPU-217ENST00000638952 NBEAL1Q6ZS30 2694 aa9.68□□□□□ -0.86
HNRNPU-217ENST00000638952 KRTAP13-2Q52LG2 175 aa9.67□□□□□ -0.86
HNRNPU-217ENST00000638952 FREM2Q5SZK8 3169 aa9.66□□□□□ -0.86
HNRNPU-217ENST00000638952 DSPP15924 2871 aaKnown RBP9.66□□□□□ -0.86
HNRNPU-217ENST00000638952 LAMA1P25391 3075 aa9.63□□□□□ -0.87
HNRNPU-217ENST00000638952 KALRNO60229 2985 aa9.62□□□□□ -0.87
HNRNPU-217ENST00000638952 SETXQ7Z333 2677 aaKnown RBP9.62□□□□□ -0.87
HNRNPU-217ENST00000638952 RPS29P62273 56 aaKnown RBP9.61□□□□□ -0.87
HNRNPU-217ENST00000638952 TNP1P09430 55 aa9.6□□□□□ -0.87
HNRNPU-217ENST00000638952 IGSF10Q6WRI0 2623 aa9.58□□□□□ -0.88
HNRNPU-217ENST00000638952 TEP1Q99973 2627 aaKnown RBP9.56□□□□□ -0.88
HNRNPU-217ENST00000638952 COL6A3P12111 3177 aa9.56□□□□□ -0.88
HNRNPU-217ENST00000638952 MAP1AP78559 2803 aaPredicted RBP9.55□□□□□ -0.88
HNRNPU-217ENST00000638952 NBEAQ8NFP9 2946 aa9.49□□□□□ -0.89
HNRNPU-217ENST00000638952 LRBAP50851 2863 aa9.49□□□□□ -0.89
HNRNPU-217ENST00000638952 NOTCH1P46531 2555 aa9.49□□□□□ -0.89
HNRNPU-217ENST00000638952 COL6A5A8TX70 2615 aa9.47□□□□□ -0.89
HNRNPU-217ENST00000638952 STAB1Q9NY15 2570 aa9.47□□□□□ -0.89
HNRNPU-217ENST00000638952 SPTBN5Q9NRC6 3674 aaKnown RBP9.46□□□□□ -0.9
HNRNPU-217ENST00000638952 STAB2Q8WWQ8 2551 aa9.41□□□□□ -0.9
HNRNPU-217ENST00000638952 ATMQ13315 3056 aa9.41□□□□□ -0.9
HNRNPU-217ENST00000638952 PP632Q6XCG6 107 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms