RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 IGFL1Q6UW32 110 aa12.81□□□□□ -0.36
CACNA1A-243ENST00000637616 LINC00588Q9Y4M8 146 aa12.81□□□□□ -0.36
CACNA1A-243ENST00000637616 REG3GQ6UW15 175 aa12.8□□□□□ -0.36
CACNA1A-243ENST00000637616 A0A087WSZ3 146 aa12.8□□□□□ -0.36
CACNA1A-243ENST00000637616 IGLV5-37A0A075B6J1 123 aa12.79□□□□□ -0.36
CACNA1A-243ENST00000637616 IGKV2-24A0A0C4DH68 120 aa12.78□□□□□ -0.36
CACNA1A-243ENST00000637616 COL6A5A8TX70 2615 aa12.77□□□□□ -0.37
CACNA1A-243ENST00000637616 LINC00208Q96KT6 92 aa12.74□□□□□ -0.37
CACNA1A-243ENST00000637616 TRAV22A0A0B4J277 110 aa12.72□□□□□ -0.37
CACNA1A-243ENST00000637616 DNAH10Q8IVF4 4471 aa12.72□□□□□ -0.37
CACNA1A-243ENST00000637616 Q1T7F1 81 aa12.72□□□□□ -0.37
CACNA1A-243ENST00000637616 LYSTQ99698 3801 aa12.71□□□□□ -0.37
CACNA1A-243ENST00000637616 NBEAL1Q6ZS30 2694 aa12.7□□□□□ -0.38
CACNA1A-243ENST00000637616 DNAH1Q9P2D7 4330 aa12.7□□□□□ -0.38
CACNA1A-243ENST00000637616 A0A096LNI7 61 aa12.68□□□□□ -0.38
CACNA1A-243ENST00000637616 MP68P56378 58 aa12.67□□□□□ -0.38
CACNA1A-243ENST00000637616 A8MUN3 132 aa12.67□□□□□ -0.38
CACNA1A-243ENST00000637616 A8MU10 97 aa12.66□□□□□ -0.38
CACNA1A-243ENST00000637616 CYP4F30PQ9H0H9 118 aa12.65□□□□□ -0.38
CACNA1A-243ENST00000637616 UBE2AP49459 152 aa12.64□□□□□ -0.39
CACNA1A-243ENST00000637616 KRTAP11-1Q8IUC1 163 aa12.63□□□□□ -0.39
CACNA1A-243ENST00000637616 CMYA5Q8N3K9 4069 aa12.62□□□□□ -0.39
CACNA1A-243ENST00000637616 B9D2Q9BPU9 175 aa12.61□□□□□ -0.39
CACNA1A-243ENST00000637616 H0Y9P7 68 aa12.6□□□□□ -0.39
CACNA1A-243ENST00000637616 CASC2Q6XLA1 102 aa12.6□□□□□ -0.39
CACNA1A-243ENST00000637616 CHTF8P0CG12 524 aa12.6□□□□□ -0.39
CACNA1A-243ENST00000637616 KRTAP29-1A8MX34 341 aaPredicted RBP12.6□□□□□ -0.39
CACNA1A-243ENST00000637616 NDUFB1O75438 58 aa12.6□□□□□ -0.39
CACNA1A-243ENST00000637616 COL7A1Q02388 2944 aa12.6□□□□□ -0.39
CACNA1A-243ENST00000637616 PRR15Q8IV56 129 aa12.58□□□□□ -0.4
CACNA1A-243ENST00000637616 CNBPP62633 177 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-243ENST00000637616 PHF5AQ7RTV0 110 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-243ENST00000637616 KRTAP1-5Q9BYS1 174 aa12.56□□□□□ -0.4
CACNA1A-243ENST00000637616 IGLV8-61A0A075B6I0 122 aa12.53□□□□□ -0.4
CACNA1A-243ENST00000637616 C16orf90A8MZG2 172 aa12.53□□□□□ -0.4
CACNA1A-243ENST00000637616 TENM2Q9NT68 2774 aa12.53□□□□□ -0.4
CACNA1A-243ENST00000637616 H0Y9J4 135 aa12.52□□□□□ -0.41
CACNA1A-243ENST00000637616 Q5VV11 94 aa12.51□□□□□ -0.41
CACNA1A-243ENST00000637616 DNAH9Q9NYC9 4486 aa12.49□□□□□ -0.41
CACNA1A-243ENST00000637616 LINC00472Q9H8W2 130 aa12.48□□□□□ -0.41
CACNA1A-243ENST00000637616 KRTAP24-1Q3LI83 254 aa12.48□□□□□ -0.41
CACNA1A-243ENST00000637616 A8MWP4 228 aa12.48□□□□□ -0.41
CACNA1A-243ENST00000637616 PMAIP1Q13794 54 aa12.48□□□□□ -0.41
CACNA1A-243ENST00000637616 STAB2Q8WWQ8 2551 aa12.47□□□□□ -0.41
CACNA1A-243ENST00000637616 CHKB-CPT1BH3BT56 60 aa12.46□□□□□ -0.41
CACNA1A-243ENST00000637616 Q8N9P0 234 aaPredicted RBP12.46□□□□□ -0.41
CACNA1A-243ENST00000637616 HUWE1Q7Z6Z7 4374 aaKnown RBP12.46□□□□□ -0.41
CACNA1A-243ENST00000637616 PRR15LQ9BU68 103 aa12.45□□□□□ -0.42
CACNA1A-243ENST00000637616 PCOTHQ58A44 107 aa12.43□□□□□ -0.42
CACNA1A-243ENST00000637616 DNAH3Q8TD57 4116 aa12.42□□□□□ -0.42
CACNA1A-243ENST00000637616 C9orf163Q8N9P6 203 aa12.41□□□□□ -0.42
CACNA1A-243ENST00000637616 SPANXA2-OT1Q8N9U9 137 aa12.41□□□□□ -0.42
CACNA1A-243ENST00000637616 MMP24-AS1A0A0U1RRL7 71 aa12.39□□□□□ -0.43
CACNA1A-243ENST00000637616 MGAM2Q2M2H8 2515 aa12.38□□□□□ -0.43
CACNA1A-243ENST00000637616 IGLV9-49A0A0B4J1Y8 123 aa12.37□□□□□ -0.43
CACNA1A-243ENST00000637616 COA5Q86WW8 74 aa12.36□□□□□ -0.43
CACNA1A-243ENST00000637616 PANO1I0J062 215 aa12.36□□□□□ -0.43
CACNA1A-243ENST00000637616 H3BPC8 53 aa12.35□□□□□ -0.43
CACNA1A-243ENST00000637616 SPTSSBQ8NFR3 76 aa12.35□□□□□ -0.43
CACNA1A-243ENST00000637616 SPRR1BP22528 89 aa12.35□□□□□ -0.43
CACNA1A-243ENST00000637616 DNAH7Q8WXX0 4024 aa12.34□□□□□ -0.43
CACNA1A-243ENST00000637616 LIMD2Q9BT23 127 aa12.33□□□□□ -0.44
CACNA1A-243ENST00000637616 UBE2DNLQ8IWF7 75 aa12.32□□□□□ -0.44
CACNA1A-243ENST00000637616 K7EIL1 84 aa12.31□□□□□ -0.44
CACNA1A-243ENST00000637616 CD164Q04900 197 aa12.3□□□□□ -0.44
CACNA1A-243ENST00000637616 NDUFS5O43920 106 aa12.29□□□□□ -0.44
CACNA1A-243ENST00000637616 LCA10Q71F78 164 aa12.28□□□□□ -0.44
CACNA1A-243ENST00000637616 A6NED7 52 aa12.28□□□□□ -0.44
CACNA1A-243ENST00000637616 IGLV7-46A0A075B6I9 117 aa12.27□□□□□ -0.44
CACNA1A-243ENST00000637616 SPAG11AQ6PDA7 123 aa12.27□□□□□ -0.45
CACNA1A-243ENST00000637616 Q96NJ1 140 aa12.26□□□□□ -0.45
CACNA1A-243ENST00000637616 IGHV6-1A0A0B4J1U7 121 aa12.25□□□□□ -0.45
CACNA1A-243ENST00000637616 ANAPC11Q9NYG5 84 aa12.23□□□□□ -0.45
CACNA1A-243ENST00000637616 MOBPQ13875 183 aa12.21□□□□□ -0.45
CACNA1A-243ENST00000637616 C8orf17Q9NRJ1 99 aa12.2□□□□□ -0.46
CACNA1A-243ENST00000637616 A0A087X002 238 aa12.19□□□□□ -0.46
CACNA1A-243ENST00000637616 NOTCH2NLQ7Z3S9 236 aa12.19□□□□□ -0.46
CACNA1A-243ENST00000637616 KRTAP13-1Q8IUC0 172 aa12.19□□□□□ -0.46
CACNA1A-243ENST00000637616 Q75L30 129 aa12.18□□□□□ -0.46
CACNA1A-243ENST00000637616 C14orf177Q52M58 125 aa12.17□□□□□ -0.46
CACNA1A-243ENST00000637616 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.17□□□□□ -0.46
CACNA1A-243ENST00000637616 LOC101927531A0A1B0GV80 90 aa12.15□□□□□ -0.46
CACNA1A-243ENST00000637616 FRAS1Q86XX4 4008 aa12.14□□□□□ -0.47
CACNA1A-243ENST00000637616 APLNQ9ULZ1 77 aa12.14□□□□□ -0.47
CACNA1A-243ENST00000637616 ASB16-AS1Q495Z4 193 aa12.14□□□□□ -0.47
CACNA1A-243ENST00000637616 TP53AIP1Q9HCN2 124 aa12.13□□□□□ -0.47
CACNA1A-243ENST00000637616 HRES1P13985 223 aa12.12□□□□□ -0.47
CACNA1A-243ENST00000637616 C4orf48Q5BLP8 95 aa12.12□□□□□ -0.47
CACNA1A-243ENST00000637616 A0A1B0GVX0 72 aa12.1□□□□□ -0.47
CACNA1A-243ENST00000637616 Q6ZR54 194 aa12.1□□□□□ -0.47
CACNA1A-243ENST00000637616 PLECQ15149 4684 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-243ENST00000637616 CDK2AP2O75956 126 aa12.09□□□□□ -0.47
CACNA1A-243ENST00000637616 ATP11AUNQ6ZP68 121 aa12.08□□□□□ -0.48
CACNA1A-243ENST00000637616 SPINK6Q6UWN8 80 aa12.08□□□□□ -0.48
CACNA1A-243ENST00000637616 SPINK7P58062 85 aa12.07□□□□□ -0.48
CACNA1A-243ENST00000637616 MRPL34Q9BQ48 92 aaKnown RBP12.06□□□□□ -0.48
CACNA1A-243ENST00000637616 KTN1-AS1Q86SY8 53 aa12.05□□□□□ -0.48
CACNA1A-243ENST00000637616 LINC01558Q9Y6Z2 57 aa12.05□□□□□ -0.48
CACNA1A-243ENST00000637616 PRR26Q8N8Z3 221 aa12.04□□□□□ -0.48
CACNA1A-243ENST00000637616 NBDYA0A0U1RRE5 68 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms