RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 Q5XG85 94 aa10.16□□□□□ -0.78
CLN5-218ENST00000637397 ATP11AUNQ6ZP68 121 aa10.14□□□□□ -0.79
CLN5-218ENST00000637397 IGLV8-61A0A075B6I0 122 aa10.14□□□□□ -0.79
CLN5-218ENST00000637397 C9orf163Q8N9P6 203 aa10.14□□□□□ -0.79
CLN5-218ENST00000637397 USP34Q70CQ2 3546 aa10.14□□□□□ -0.79
CLN5-218ENST00000637397 ANAPC11Q9NYG5 84 aa10.12□□□□□ -0.79
CLN5-218ENST00000637397 A0A1B0GVX0 72 aa10.12□□□□□ -0.79
CLN5-218ENST00000637397 SPRR4Q96PI1 79 aa10.11□□□□□ -0.79
CLN5-218ENST00000637397 IGLV5-37A0A075B6J1 123 aa10.11□□□□□ -0.79
CLN5-218ENST00000637397 WIPF1O43516 503 aa10.11□□□□□ -0.79
CLN5-218ENST00000637397 FAM229AH3BQW9 127 aa10.09□□□□□ -0.79
CLN5-218ENST00000637397 FP248Q71RG6 208 aaPredicted RBP10.09□□□□□ -0.79
CLN5-218ENST00000637397 OXTP01178 125 aa10.08□□□□□ -0.8
CLN5-218ENST00000637397 COL6A5A8TX70 2615 aa10.07□□□□□ -0.8
CLN5-218ENST00000637397 FAM229BQ4G0N7 80 aa10.07□□□□□ -0.8
CLN5-218ENST00000637397 SPANXA2-OT1Q8N9U9 137 aa10.07□□□□□ -0.8
CLN5-218ENST00000637397 CNBPP62633 177 aaKnown RBP10.06□□□□□ -0.8
CLN5-218ENST00000637397 NBEAL1Q6ZS30 2694 aa10.06□□□□□ -0.8
CLN5-218ENST00000637397 C8orf87E5RJ46 101 aa10.05□□□□□ -0.8
CLN5-218ENST00000637397 ZNF861PO60384 105 aa10.05□□□□□ -0.8
CLN5-218ENST00000637397 STAB1Q9NY15 2570 aa10.04□□□□□ -0.8
CLN5-218ENST00000637397 Q1T7F1 81 aa10.02□□□□□ -0.81
CLN5-218ENST00000637397 TYMSOSQ8TAI1 123 aa10.02□□□□□ -0.81
CLN5-218ENST00000637397 Q96NJ1 140 aa10.01□□□□□ -0.81
CLN5-218ENST00000637397 PSORS1C2Q9UIG4 136 aa10□□□□□ -0.81
CLN5-218ENST00000637397 A0A087WTM6 91 aa9.99□□□□□ -0.81
CLN5-218ENST00000637397 DMXL1Q9Y485 3027 aa9.99□□□□□ -0.81
CLN5-218ENST00000637397 UQCR11O14957 56 aa9.98□□□□□ -0.81
CLN5-218ENST00000637397 SPRR1AP35321 89 aa9.97□□□□□ -0.81
CLN5-218ENST00000637397 ZANQ9Y493 2812 aa9.96□□□□□ -0.81
CLN5-218ENST00000637397 SSBP3-AS1Q7Z2R9 100 aa9.96□□□□□ -0.81
CLN5-218ENST00000637397 CD164Q04900 197 aa9.95□□□□□ -0.82
CLN5-218ENST00000637397 KTN1-AS1Q86SY8 53 aa9.95□□□□□ -0.82
CLN5-218ENST00000637397 APLNQ9ULZ1 77 aa9.95□□□□□ -0.82
CLN5-218ENST00000637397 PLA2G1BP04054 148 aaKnown RBP9.94□□□□□ -0.82
CLN5-218ENST00000637397 PRR26Q8N8Z3 221 aa9.94□□□□□ -0.82
CLN5-218ENST00000637397 UTP20O75691 2785 aaKnown RBP9.92□□□□□ -0.82
CLN5-218ENST00000637397 KRTAP26-1Q6PEX3 210 aa9.91□□□□□ -0.82
CLN5-218ENST00000637397 WDFY3Q8IZQ1 3526 aa9.91□□□□□ -0.82
CLN5-218ENST00000637397 BAHCC1Q9P281 2608 aa9.91□□□□□ -0.82
CLN5-218ENST00000637397 TNRC18O15417 2968 aaPredicted RBP9.91□□□□□ -0.82
CLN5-218ENST00000637397 MIR22HGQ0VDD5 57 aa9.9□□□□□ -0.82
CLN5-218ENST00000637397 CDC42SE1Q9NRR8 79 aa9.89□□□□□ -0.83
CLN5-218ENST00000637397 IGLV7-43P04211 117 aa9.89□□□□□ -0.83
CLN5-218ENST00000637397 IGLV7-46A0A075B6I9 117 aa9.88□□□□□ -0.83
CLN5-218ENST00000637397 Q8N9P0 234 aaPredicted RBP9.86□□□□□ -0.83
CLN5-218ENST00000637397 NSD1Q96L73 2696 aaPredicted RBP9.86□□□□□ -0.83
CLN5-218ENST00000637397 MMP24-AS1A0A0U1RRL7 71 aa9.85□□□□□ -0.83
CLN5-218ENST00000637397 CELSR2Q9HCU4 2923 aa9.85□□□□□ -0.83
CLN5-218ENST00000637397 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.85□□□□□ -0.83
CLN5-218ENST00000637397 HRNRQ86YZ3 2850 aaPredicted RBP9.82□□□□□ -0.84
CLN5-218ENST00000637397 TNP2Q05952 138 aa9.8□□□□□ -0.84
CLN5-218ENST00000637397 LINC00472Q9H8W2 130 aa9.8□□□□□ -0.84
CLN5-218ENST00000637397 ITPR2Q14571 2701 aa9.79□□□□□ -0.84
CLN5-218ENST00000637397 DCHS1Q96JQ0 3298 aa9.79□□□□□ -0.84
CLN5-218ENST00000637397 LCA10Q71F78 164 aa9.78□□□□□ -0.84
CLN5-218ENST00000637397 Q75L30 129 aa9.77□□□□□ -0.85
CLN5-218ENST00000637397 APCP25054 2843 aa9.77□□□□□ -0.85
CLN5-218ENST00000637397 HIVEP1P15822 2718 aa9.77□□□□□ -0.85
CLN5-218ENST00000637397 Q5VV11 94 aa9.76□□□□□ -0.85
CLN5-218ENST00000637397 KRTAP1-5Q9BYS1 174 aa9.75□□□□□ -0.85
CLN5-218ENST00000637397 NF1P21359 2839 aa9.75□□□□□ -0.85
CLN5-218ENST00000637397 STAB2Q8WWQ8 2551 aa9.75□□□□□ -0.85
CLN5-218ENST00000637397 FBN2P35556 2912 aa9.75□□□□□ -0.85
CLN5-218ENST00000637397 Q8N1X5 172 aa9.75□□□□□ -0.85
CLN5-218ENST00000637397 C9orf92A6NGG3 77 aa9.74□□□□□ -0.85
CLN5-218ENST00000637397 SPRR1BP22528 89 aa9.74□□□□□ -0.85
CLN5-218ENST00000637397 LINC00304Q8N9R0 145 aa9.74□□□□□ -0.85
CLN5-218ENST00000637397 KRTAP4-16G5E9R7 235 aaPredicted RBP9.74□□□□□ -0.85
CLN5-218ENST00000637397 HRES1P13985 223 aa9.73□□□□□ -0.85
CLN5-218ENST00000637397 WWC2-AS2Q96NR7 200 aa9.73□□□□□ -0.85
CLN5-218ENST00000637397 LINC01558Q9Y6Z2 57 aa9.71□□□□□ -0.85
CLN5-218ENST00000637397 NIPBLQ6KC79 2804 aaeCLIP9.68□□□□□ -0.86
CLN5-218ENST00000637397 DCHS2Q6V1P9 2916 aa9.68□□□□□ -0.86
CLN5-218ENST00000637397 SMR3BP02814 79 aaPredicted RBP9.67□□□□□ -0.86
CLN5-218ENST00000637397 RBM12B-AS1Q9P1G2 102 aa9.66□□□□□ -0.86
CLN5-218ENST00000637397 ASPMQ8IZT6 3477 aa9.66□□□□□ -0.86
CLN5-218ENST00000637397 CRYBG3Q68DQ2 2970 aa9.64□□□□□ -0.87
CLN5-218ENST00000637397 ZFHX4Q86UP3 3567 aa9.63□□□□□ -0.87
CLN5-218ENST00000637397 RELNP78509 3460 aa9.63□□□□□ -0.87
CLN5-218ENST00000637397 ZCCHC13Q8WW36 166 aaKnown RBP9.62□□□□□ -0.87
CLN5-218ENST00000637397 SPINK7P58062 85 aa9.62□□□□□ -0.87
CLN5-218ENST00000637397 SPINT4Q6UDR6 99 aa9.61□□□□□ -0.87
CLN5-218ENST00000637397 KRTAP29-1A8MX34 341 aaPredicted RBP9.61□□□□□ -0.87
CLN5-218ENST00000637397 PLAC8Q9NZF1 115 aa9.58□□□□□ -0.88
CLN5-218ENST00000637397 PRAC1Q96KF2 57 aa9.56□□□□□ -0.88
CLN5-218ENST00000637397 Q5W150 140 aa9.55□□□□□ -0.88
CLN5-218ENST00000637397 PANO1I0J062 215 aa9.54□□□□□ -0.88
CLN5-218ENST00000637397 MXRA5Q9NR99 2828 aa9.52□□□□□ -0.89
CLN5-218ENST00000637397 LAMA5O15230 3695 aa9.52□□□□□ -0.89
CLN5-218ENST00000637397 KRTAP7-1Q8IUC3 87 aa9.52□□□□□ -0.89
CLN5-218ENST00000637397 A0A0D9SG42 100 aa9.48□□□□□ -0.89
CLN5-218ENST00000637397 KRTAP11-1Q8IUC1 163 aa9.47□□□□□ -0.89
CLN5-218ENST00000637397 Q6ZR54 194 aa9.46□□□□□ -0.89
CLN5-218ENST00000637397 LCE6AA0A183 80 aa9.46□□□□□ -0.9
CLN5-218ENST00000637397 MUC3AQ02505 3323 aa9.46□□□□□ -0.9
CLN5-218ENST00000637397 CRIPTQ9P021 101 aa9.45□□□□□ -0.9
CLN5-218ENST00000637397 KMT2BQ9UMN6 2715 aaPredicted RBP9.45□□□□□ -0.9
CLN5-218ENST00000637397 A0A1B0GU33 70 aa9.45□□□□□ -0.9
CLN5-218ENST00000637397 DMBT1Q9UGM3 2413 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms