RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 PSCAO43653 123 aa9.99□□□□□ -0.81
CACNA1A-235ENST00000637004 PRR4Q16378 134 aa9.99□□□□□ -0.81
CACNA1A-235ENST00000637004 KRTAP21-3Q3LHN1 58 aa9.98□□□□□ -0.81
CACNA1A-235ENST00000637004 C11orf45Q8TAV5 145 aa9.98□□□□□ -0.81
CACNA1A-235ENST00000637004 UBE2BP63146 152 aa9.97□□□□□ -0.81
CACNA1A-235ENST00000637004 FAM168BA1KXE4 195 aa9.95□□□□□ -0.82
CACNA1A-235ENST00000637004 KTN1-AS1Q86SY8 53 aa9.95□□□□□ -0.82
CACNA1A-235ENST00000637004 LINC00476Q8WZB0 136 aa9.95□□□□□ -0.82
CACNA1A-235ENST00000637004 B9D2Q9BPU9 175 aa9.93□□□□□ -0.82
CACNA1A-235ENST00000637004 WFDC13Q8IUB5 93 aa9.92□□□□□ -0.82
CACNA1A-235ENST00000637004 FBN3Q75N90 2809 aa9.92□□□□□ -0.82
CACNA1A-235ENST00000637004 A8MUN3 132 aa9.92□□□□□ -0.82
CACNA1A-235ENST00000637004 A8MU10 97 aa9.91□□□□□ -0.82
CACNA1A-235ENST00000637004 LINC00208Q96KT6 92 aa9.91□□□□□ -0.82
CACNA1A-235ENST00000637004 KRTAP10-11P60412 298 aa9.9□□□□□ -0.82
CACNA1A-235ENST00000637004 SPANXA2-OT1Q8N9U9 137 aa9.9□□□□□ -0.82
CACNA1A-235ENST00000637004 H3BPC8 53 aa9.9□□□□□ -0.82
CACNA1A-235ENST00000637004 IGFL1Q6UW32 110 aa9.9□□□□□ -0.82
CACNA1A-235ENST00000637004 LINC00588Q9Y4M8 146 aa9.9□□□□□ -0.82
CACNA1A-235ENST00000637004 REG3GQ6UW15 175 aa9.89□□□□□ -0.83
CACNA1A-235ENST00000637004 KRTAP7-1Q8IUC3 87 aa9.89□□□□□ -0.83
CACNA1A-235ENST00000637004 DNAH10OSP0CZ25 163 aa9.88□□□□□ -0.83
CACNA1A-235ENST00000637004 DEFB116Q30KQ4 102 aa9.88□□□□□ -0.83
CACNA1A-235ENST00000637004 A0A087WSZ3 146 aa9.87□□□□□ -0.83
CACNA1A-235ENST00000637004 LIMD2Q9BT23 127 aa9.87□□□□□ -0.83
CACNA1A-235ENST00000637004 Q5VV11 94 aa9.86□□□□□ -0.83
CACNA1A-235ENST00000637004 TENM3Q9P273 2699 aa9.85□□□□□ -0.83
CACNA1A-235ENST00000637004 KRTAP29-1A8MX34 341 aaPredicted RBP9.85□□□□□ -0.83
CACNA1A-235ENST00000637004 PRKDCP78527 4128 aaKnown RBP9.85□□□□□ -0.83
CACNA1A-235ENST00000637004 IGLV8-61A0A075B6I0 122 aa9.85□□□□□ -0.83
CACNA1A-235ENST00000637004 DEFB131BA0A096LNP1 70 aa9.85□□□□□ -0.83
CACNA1A-235ENST00000637004 H0Y9P7 68 aa9.85□□□□□ -0.83
CACNA1A-235ENST00000637004 COL7A1Q02388 2944 aa9.85□□□□□ -0.83
CACNA1A-235ENST00000637004 A0A0G2JQZ4 141 aa9.84□□□□□ -0.83
CACNA1A-235ENST00000637004 A0A1W2PNN7 141 aa9.84□□□□□ -0.83
CACNA1A-235ENST00000637004 UBE2AP49459 152 aa9.83□□□□□ -0.84
CACNA1A-235ENST00000637004 CASC2Q6XLA1 102 aa9.83□□□□□ -0.84
CACNA1A-235ENST00000637004 Q8N9P0 234 aaPredicted RBP9.83□□□□□ -0.84
CACNA1A-235ENST00000637004 STAB2Q8WWQ8 2551 aa9.81□□□□□ -0.84
CACNA1A-235ENST00000637004 CHKB-CPT1BH3BT56 60 aa9.81□□□□□ -0.84
CACNA1A-235ENST00000637004 RPL37AP61513 92 aaKnown RBP9.8□□□□□ -0.84
CACNA1A-235ENST00000637004 CASC10Q5T4H9 136 aa9.79□□□□□ -0.84
CACNA1A-235ENST00000637004 DNAH3Q8TD57 4116 aa9.78□□□□□ -0.84
CACNA1A-235ENST00000637004 PRR15LQ9BU68 103 aa9.77□□□□□ -0.85
CACNA1A-235ENST00000637004 H3BS24 57 aa9.77□□□□□ -0.85
CACNA1A-235ENST00000637004 A8MWP4 228 aa9.76□□□□□ -0.85
CACNA1A-235ENST00000637004 NDUFS5O43920 106 aa9.76□□□□□ -0.85
CACNA1A-235ENST00000637004 K7EIL1 84 aa9.76□□□□□ -0.85
CACNA1A-235ENST00000637004 PRLHP81277 87 aa9.76□□□□□ -0.85
CACNA1A-235ENST00000637004 C9orf163Q8N9P6 203 aa9.76□□□□□ -0.85
CACNA1A-235ENST00000637004 C16orf90A8MZG2 172 aa9.75□□□□□ -0.85
CACNA1A-235ENST00000637004 C8orf87E5RJ46 101 aa9.75□□□□□ -0.85
CACNA1A-235ENST00000637004 CNBPP62633 177 aaKnown RBP9.75□□□□□ -0.85
CACNA1A-235ENST00000637004 PHF5AQ7RTV0 110 aaKnown RBP9.74□□□□□ -0.85
CACNA1A-235ENST00000637004 Q75L30 129 aa9.72□□□□□ -0.85
CACNA1A-235ENST00000637004 LINC00472Q9H8W2 130 aa9.71□□□□□ -0.85
CACNA1A-235ENST00000637004 LOC101927531A0A1B0GV80 90 aa9.7□□□□□ -0.86
CACNA1A-235ENST00000637004 A6NN06 94 aa9.7□□□□□ -0.86
CACNA1A-235ENST00000637004 SPTSSBQ8NFR3 76 aa9.7□□□□□ -0.86
CACNA1A-235ENST00000637004 ATP11AUNQ6ZP68 121 aa9.7□□□□□ -0.86
CACNA1A-235ENST00000637004 COA5Q86WW8 74 aa9.7□□□□□ -0.86
CACNA1A-235ENST00000637004 IGLV7-46A0A075B6I9 117 aa9.69□□□□□ -0.86
CACNA1A-235ENST00000637004 A6NED7 52 aa9.68□□□□□ -0.86
CACNA1A-235ENST00000637004 SPRR1BP22528 89 aa9.67□□□□□ -0.86
CACNA1A-235ENST00000637004 A0A096LNI7 61 aa9.66□□□□□ -0.86
CACNA1A-235ENST00000637004 IGKV2-24A0A0C4DH68 120 aa9.66□□□□□ -0.86
CACNA1A-235ENST00000637004 H0Y9J4 135 aa9.66□□□□□ -0.86
CACNA1A-235ENST00000637004 LCA10Q71F78 164 aa9.65□□□□□ -0.86
CACNA1A-235ENST00000637004 TENM2Q9NT68 2774 aa9.65□□□□□ -0.87
CACNA1A-235ENST00000637004 MMP24-AS1A0A0U1RRL7 71 aa9.64□□□□□ -0.87
CACNA1A-235ENST00000637004 C7orf65Q6ZTY9 151 aa9.62□□□□□ -0.87
CACNA1A-235ENST00000637004 DNAH9Q9NYC9 4486 aa9.62□□□□□ -0.87
CACNA1A-235ENST00000637004 TP53AIP1Q9HCN2 124 aa9.61□□□□□ -0.87
CACNA1A-235ENST00000637004 CDC42SE1Q9NRR8 79 aa9.6□□□□□ -0.87
CACNA1A-235ENST00000637004 HUWE1Q7Z6Z7 4374 aaKnown RBP9.6□□□□□ -0.87
CACNA1A-235ENST00000637004 LINC01558Q9Y6Z2 57 aa9.58□□□□□ -0.88
CACNA1A-235ENST00000637004 PCOTHQ58A44 107 aa9.58□□□□□ -0.88
CACNA1A-235ENST00000637004 MOBPQ13875 183 aa9.56□□□□□ -0.88
CACNA1A-235ENST00000637004 CSMD3Q7Z407 3707 aa9.56□□□□□ -0.88
CACNA1A-235ENST00000637004 ASB16-AS1Q495Z4 193 aa9.54□□□□□ -0.88
CACNA1A-235ENST00000637004 SPAG11AQ6PDA7 123 aa9.54□□□□□ -0.88
CACNA1A-235ENST00000637004 PLAC8Q9NZF1 115 aa9.54□□□□□ -0.88
CACNA1A-235ENST00000637004 Q6ZR54 194 aa9.53□□□□□ -0.88
CACNA1A-235ENST00000637004 KRTAP11-1Q8IUC1 163 aa9.53□□□□□ -0.88
CACNA1A-235ENST00000637004 PRR26Q8N8Z3 221 aa9.5□□□□□ -0.89
CACNA1A-235ENST00000637004 C8orf17Q9NRJ1 99 aa9.5□□□□□ -0.89
CACNA1A-235ENST00000637004 C14orf177Q52M58 125 aa9.49□□□□□ -0.89
CACNA1A-235ENST00000637004 CHTF8P0CG12 524 aa9.48□□□□□ -0.89
CACNA1A-235ENST00000637004 Q96NJ1 140 aa9.48□□□□□ -0.89
CACNA1A-235ENST00000637004 LYSTQ99698 3801 aa9.46□□□□□ -0.9
CACNA1A-235ENST00000637004 HRES1P13985 223 aa9.46□□□□□ -0.9
CACNA1A-235ENST00000637004 DNAH1Q9P2D7 4330 aa9.45□□□□□ -0.9
CACNA1A-235ENST00000637004 KRTAP1-5Q9BYS1 174 aa9.44□□□□□ -0.9
CACNA1A-235ENST00000637004 A0A1B0GVX0 72 aa9.43□□□□□ -0.9
CACNA1A-235ENST00000637004 CDK2AP2O75956 126 aa9.42□□□□□ -0.9
CACNA1A-235ENST00000637004 SPINK7P58062 85 aa9.42□□□□□ -0.9
CACNA1A-235ENST00000637004 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
CACNA1A-235ENST00000637004 IGLV9-49A0A0B4J1Y8 123 aa9.41□□□□□ -0.9
CACNA1A-235ENST00000637004 KRTAP13-1Q8IUC0 172 aa9.41□□□□□ -0.9
CACNA1A-235ENST00000637004 MRPL34Q9BQ48 92 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms