RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 hADV29S1A0JD25 119 aa4.05□□□□□ -1.76
UPF3B-205ENST00000636792 H7C2G1 150 aa4.05□□□□□ -1.76
UPF3B-205ENST00000636792 OXTP01178 125 aa4.05□□□□□ -1.76
UPF3B-205ENST00000636792 SPRR1BP22528 89 aa4.05□□□□□ -1.76
UPF3B-205ENST00000636792 LINC00483Q53H64 154 aa4.05□□□□□ -1.76
UPF3B-205ENST00000636792 SNHG12Q9BXW3 62 aa4.05□□□□□ -1.76
UPF3B-205ENST00000636792 HERC2O95714 4834 aa4.05□□□□□ -1.76
UPF3B-205ENST00000636792 IGLV5-48A0A075B6I7 105 aa4.04□□□□□ -1.76
UPF3B-205ENST00000636792 TRBV20-1A0A075B6N2 111 aa4.04□□□□□ -1.76
UPF3B-205ENST00000636792 DNAL4O96015 105 aa4.04□□□□□ -1.76
UPF3B-205ENST00000636792 TRACP01848 142 aa4.04□□□□□ -1.76
UPF3B-205ENST00000636792 BATFQ16520 125 aa4.04□□□□□ -1.76
UPF3B-205ENST00000636792 SPRR4Q96PI1 79 aa4.04□□□□□ -1.76
UPF3B-205ENST00000636792 TEX49A0A1B0GTD5 131 aa4.03□□□□□ -1.76
UPF3B-205ENST00000636792 LST1O00453 97 aa4.03□□□□□ -1.76
UPF3B-205ENST00000636792 KRTAP1-4P0C5Y4 121 aa4.03□□□□□ -1.76
UPF3B-205ENST00000636792 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
UPF3B-205ENST00000636792 PCP4L1A6NKN8 68 aa4.02□□□□□ -1.77
UPF3B-205ENST00000636792 SCGB1C2P0DMR2 95 aa4.02□□□□□ -1.77
UPF3B-205ENST00000636792 CRYGAP11844 174 aa4.02□□□□□ -1.77
UPF3B-205ENST00000636792 ATXN8Q156A1 80 aa4.02□□□□□ -1.77
UPF3B-205ENST00000636792 Q6ZQY7 126 aa4.02□□□□□ -1.77
UPF3B-205ENST00000636792 LINC01600Q96MT4 127 aa4.02□□□□□ -1.77
UPF3B-205ENST00000636792 TAX1BP3O14907 124 aa4.01□□□□□ -1.77
UPF3B-205ENST00000636792 FABP2P12104 132 aa4.01□□□□□ -1.77
UPF3B-205ENST00000636792 PKHD1L1Q86WI1 4243 aa4□□□□□ -1.77
UPF3B-205ENST00000636792 A0A1W2PPM0 123 aa4□□□□□ -1.77
UPF3B-205ENST00000636792 H3BUT2 72 aa4□□□□□ -1.77
UPF3B-205ENST00000636792 TMEM256-PLSCR3K7ERE1 68 aa4□□□□□ -1.77
UPF3B-205ENST00000636792 ERC2-IT1O76042 136 aa4□□□□□ -1.77
UPF3B-205ENST00000636792 C21orf62-AS1Q17RA5 79 aa4□□□□□ -1.77
UPF3B-205ENST00000636792 FAM218AQ96MZ4 157 aa4□□□□□ -1.77
UPF3B-205ENST00000636792 ORMDL1Q9P0S3 153 aa4□□□□□ -1.77
UPF3B-205ENST00000636792 LAMTOR3Q9UHA4 124 aa4□□□□□ -1.77
UPF3B-205ENST00000636792 F8WEM9 126 aa3.99□□□□□ -1.77
UPF3B-205ENST00000636792 LINC01547P58512 204 aaPredicted RBP3.99□□□□□ -1.77
UPF3B-205ENST00000636792 GAGE2AQ6NT46 116 aa3.99□□□□□ -1.77
UPF3B-205ENST00000636792 SSBP3-AS1Q7Z2R9 100 aa3.99□□□□□ -1.77
UPF3B-205ENST00000636792 Q8NBF4 154 aa3.99□□□□□ -1.77
UPF3B-205ENST00000636792 CLEC2BQ92478 149 aa3.99□□□□□ -1.77
UPF3B-205ENST00000636792 FAT1Q14517 4588 aa3.99□□□□□ -1.77
UPF3B-205ENST00000636792 IGLV8-61A0A075B6I0 122 aa3.98□□□□□ -1.77
UPF3B-205ENST00000636792 UBE2V1Q13404 147 aa3.98□□□□□ -1.77
UPF3B-205ENST00000636792 H3BT86 120 aa3.97□□□□□ -1.77
UPF3B-205ENST00000636792 TCL1BO95988 128 aa3.97□□□□□ -1.77
UPF3B-205ENST00000636792 RPS29P62273 56 aaKnown RBP3.97□□□□□ -1.77
UPF3B-205ENST00000636792 Q6JHZ5 121 aa3.97□□□□□ -1.77
UPF3B-205ENST00000636792 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
UPF3B-205ENST00000636792 SPAG11AQ6PDA7 123 aa3.97□□□□□ -1.77
UPF3B-205ENST00000636792 Q8N377 158 aa3.97□□□□□ -1.77
UPF3B-205ENST00000636792 ST20-AS1Q8NBB2 130 aa3.97□□□□□ -1.77
UPF3B-205ENST00000636792 TYMSOSQ8TAI1 123 aa3.97□□□□□ -1.77
UPF3B-205ENST00000636792 SRRM2Q9UQ35 2752 aaKnown RBP3.97□□□□□ -1.77
UPF3B-205ENST00000636792 A0A087X002 238 aa3.96□□□□□ -1.78
UPF3B-205ENST00000636792 KRTAP10-8P60410 259 aa3.96□□□□□ -1.78
UPF3B-205ENST00000636792 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
UPF3B-205ENST00000636792 GTF2H5Q6ZYL4 71 aa3.96□□□□□ -1.78
UPF3B-205ENST00000636792 SMIM29Q86T20 159 aa3.96□□□□□ -1.78
UPF3B-205ENST00000636792 SPCS1Q9Y6A9 102 aa3.96□□□□□ -1.78
UPF3B-205ENST00000636792 FLG2Q5D862 2391 aaPredicted RBP3.96□□□□□ -1.78
UPF3B-205ENST00000636792 JMJD7-PLA2G4BH0Y9G9 81 aa3.95□□□□□ -1.78
UPF3B-205ENST00000636792 K7EP34 96 aa3.95□□□□□ -1.78
UPF3B-205ENST00000636792 CD164Q04900 197 aa3.95□□□□□ -1.78
UPF3B-205ENST00000636792 KRTAP13-2Q52LG2 175 aa3.95□□□□□ -1.78
UPF3B-205ENST00000636792 PRR26Q8N8Z3 221 aa3.95□□□□□ -1.78
UPF3B-205ENST00000636792 DEFB105AQ8NG35 78 aa3.95□□□□□ -1.78
UPF3B-205ENST00000636792 NAA38Q9BRA0 125 aaKnown RBP3.95□□□□□ -1.78
UPF3B-205ENST00000636792 ABCA13Q86UQ4 5058 aa3.94□□□□□ -1.78
UPF3B-205ENST00000636792 SPINK1P00995 79 aa3.94□□□□□ -1.78
UPF3B-205ENST00000636792 MT1HL1P0DM35 61 aa3.94□□□□□ -1.78
UPF3B-205ENST00000636792 NDUFV3P56181 108 aaKnown RBP3.94□□□□□ -1.78
UPF3B-205ENST00000636792 MOBPQ13875 183 aa3.94□□□□□ -1.78
UPF3B-205ENST00000636792 C9orf153Q5TBE3 101 aa3.94□□□□□ -1.78
UPF3B-205ENST00000636792 IGLV9-49A0A0B4J1Y8 123 aa3.93□□□□□ -1.78
UPF3B-205ENST00000636792 C9JAW5 83 aa3.93□□□□□ -1.78
UPF3B-205ENST00000636792 BAALC-AS2P0C853 105 aa3.93□□□□□ -1.78
UPF3B-205ENST00000636792 PDE6GP18545 87 aa3.93□□□□□ -1.78
UPF3B-205ENST00000636792 Q6Q795 121 aa3.93□□□□□ -1.78
UPF3B-205ENST00000636792 C3orf22Q8N5N4 141 aa3.93□□□□□ -1.78
UPF3B-205ENST00000636792 LINC00304Q8N9R0 145 aa3.93□□□□□ -1.78
UPF3B-205ENST00000636792 A0A1B0GW54 56 aa3.92□□□□□ -1.78
UPF3B-205ENST00000636792 H3BMG7 143 aa3.92□□□□□ -1.78
UPF3B-205ENST00000636792 KRTAP10-6P60371 365 aaPredicted RBP3.92□□□□□ -1.78
UPF3B-205ENST00000636792 Q5XG85 94 aa3.92□□□□□ -1.78
UPF3B-205ENST00000636792 ANKRD29Q8N6D5 301 aa3.92□□□□□ -1.78
UPF3B-205ENST00000636792 LIMD2Q9BT23 127 aa3.92□□□□□ -1.78
UPF3B-205ENST00000636792 ANAPC11Q9NYG5 84 aa3.92□□□□□ -1.78
UPF3B-205ENST00000636792 F8W1H4 67 aa3.91□□□□□ -1.78
UPF3B-205ENST00000636792 TRBV7-4A0A0J9YYF1 115 aa3.9□□□□□ -1.79
UPF3B-205ENST00000636792 RBM3P98179 157 aaKnown RBP3.9□□□□□ -1.79
UPF3B-205ENST00000636792 TEN1Q86WV5 123 aa3.9□□□□□ -1.79
UPF3B-205ENST00000636792 OBSCN-AS1Q96MR7 158 aa3.9□□□□□ -1.79
UPF3B-205ENST00000636792 DSCR8Q96T75 97 aa3.9□□□□□ -1.79
UPF3B-205ENST00000636792 SS18L2Q9UHA2 77 aa3.9□□□□□ -1.79
UPF3B-205ENST00000636792 LOC110117498A0A087WWA1 95 aa3.89□□□□□ -1.79
UPF3B-205ENST00000636792 IGFL1Q6UW32 110 aa3.89□□□□□ -1.79
UPF3B-205ENST00000636792 ASB16-AS1Q495Z4 193 aa3.88□□□□□ -1.79
UPF3B-205ENST00000636792 Q8N9P0 234 aaPredicted RBP3.88□□□□□ -1.79
UPF3B-205ENST00000636792 PRO0461Q9UI25 63 aa3.88□□□□□ -1.79
UPF3B-205ENST00000636792 FAT3Q8TDW7 4589 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms